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Properties
| Property Name | Value |
|---|
| TranscriptId | 587471 |
| Track | FilteredModels2 |
| ProteinId | 587385 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:318765..320148 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4659 ID=mRNA_4659|Name=jgi.p|Nanoce1779_2|587385|organism=Nannochloropsis oceanica|type=mRNA|length=1384bp
TTTTGTAATTTTTTGTGGGAGGTTTGCTTGACTGGTTTTGTTGCTTGCAC
GCAAAGCGACACACAGCTAACTCTGATTGTCAACACTTACTGAGAGAAAC
ACATGGAAGACCCATCTTAAAATCGCAGTGTGAGCCCGGCCGTGACCTGT
GCCTCTGGCTGGACGCAAAGATACTCCAGAGCCGCCTCTCTAATCGTTGA
AGTCACCCATGGTTACCCCTTCTCATGCATCCCTACGCACGCACTTACAT
ACATAGCGCCTTTGATGGGTCGATTGCCAAGCATGCGTTGCCGGGCTGGC
AGCAAAGCTAGGAAGGGAATGCTCTTAATTGTTGGGCTGCCAGGAATTTG
CCGTAGATCGTCTGCCTTTCTTATTCCCAGACTCTGGAAGTGCCAAGTAC
TAGCAGCATCCACCACCACGGACCCCGCCTTTGCTATCGCGCCCACCAGC
TCCGCCTTTTCGTCCAGCATCAAGCACCGGGAGGAGCTTTTGACTCTGGT
CACCATGCCGGAGGATGTCAGAGAAGGGAGGGAAGAATCCATCGCCCAGC
GCATTGACTTTGTCGTGGGCCAGCTCAAGGAGAAGTACGTGCCCCCTCAA
ACCTTGCCCTTTATGAATTTGCTACTGCAAGGCAGTTGGTTGAACATATA
CAATTCCTGGACAGTGCGGCGTAAAGTGGCAGAGGCGCGCAGCCTGCTTG
CTGAGGATGAAAGAGAGGAGGAGGACGAGGACAATTTCCTGGATCTCTTG
GGTCCCGCTGAGGAGGAGGATTGGGCCGCAGGGGCGGCCGCGGCAGCCTT
AGGAGGCCCTGCACCGATGGCCGCCACGCAGATGGTGCTGAGTGATTTTC
AACAAATACTAATTCCAAACGTGACGAAAGGGTGCATCATCAATACAGTT
AAATGGGAGTGCACGGCGAGCGAGGAAGGGGATACTGGCTTGGCGGGGGC
CTTGGTCGTCCGCAGCAGCTACGAGGTCAACAGCCGAGGCTTATTAGAAA
TGGGGGAGGTGGAGCACGATATGAGCATGAATCGTGCCCCCCGTAACCCA
GATGCACTCATCCGGGCCGTGCAGCGGGTGGTGCCCTTCGACGCGTTCGA
CCCCAACGGGACCTTTGTAGAGACGGCCTTCTTAGACCACGAGCTCCGGG
TTACCTTGACCCACAGCACACGCTTCGGCGCAATCACGAGCCTATACGTA
CGCAACGGCACAGATCTCCAACGACAAATACAGCAGCATCTATTACAGGA
AGTGCAGTGACCGGCAGAAACAAAAGAAAAGACGATGTATTTTTCGTAGG
CAAAGCAGAGCCGTGAGGTTGGGTGTTATTTTCACTCGCTTGAGTGGACA
CCCCACCGCGCCCTAGCTCGTCAAATTAAATGAG back to topprotein sequence of jgi.p|Nanoce1779_2|587385 >mRNA_4659-protein ID=mRNA_4659-protein|Name=jgi.p|Nanoce1779_2|587385|organism=Nannochloropsis oceanica|type=polypeptide|length=332bp
MGRLPSMRCRAGSKARKGMLLIVGLPGICRRSSAFLIPRLWKCQVLAAST
TTDPAFAIAPTSSAFSSSIKHREELLTLVTMPEDVREGREESIAQRIDFV
VGQLKEKYVPPQTLPFMNLLLQGSWLNIYNSWTVRRKVAEARSLLAEDER
EEEDEDNFLDLLGPAEEEDWAAGAAAAALGGPAPMAATQMVLSDFQQILI
PNVTKGCIINTVKWECTASEEGDTGLAGALVVRSSYEVNSRGLLEMGEVE
HDMSMNRAPRNPDALIRAVQRVVPFDAFDPNGTFVETAFLDHELRVTLTH
STRFGAITSLYVRNGTDLQRQIQQHLLQEVQ* back to topmRNA from alignment at scaffold_9:318765..320148- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4659 ID=mRNA_4659|Name=jgi.p|Nanoce1779_2|587385|organism=Nannochloropsis oceanica|type=mRNA|length=1384bp|location=Sequence derived from alignment at scaffold_9:318765..320148- (Nannochloropsis oceanica)
TTTTGTAATTTTTTGTGGGAGGTTTGCTTGACTGGTTTTGTTGCTTGCAC
GCAAAGCGACACACAGCTAACTCTGATTGTCAACACTTACTGAGAGAAAC
ACATGGAAGACCCATCTTAAAATCGCAGTGTGAGCCCGGCCGTGACCTGT
GCCTCTGGCTGGACGCAAAGATACTCCAGAGCCGCCTCTCTAATCGTTGA
AGTCACCCATGGTTACCCCTTCTCATGCATCCCTACGCACGCACTTACAT
ACATAGCGCCTTTGATGGGTCGATTGCCAAGCATGCGTTGCCGGGCTGGC
AGCAAAGCTAGGAAGGGAATGCTCTTAATTGTTGGGCTGCCAGGAATTTG
CCGTAGATCGTCTGCCTTTCTTATTCCCAGACTCTGGAAGTGCCAAGTAC
TAGCAGCATCCACCACCACGGACCCCGCCTTTGCTATCGCGCCCACCAGC
TCCGCCTTTTCGTCCAGCATCAAGCACCGGGAGGAGCTTTTGACTCTGGT
CACCATGCCGGAGGATGTCAGAGAAGGGAGGGAAGAATCCATCGCCCAGC
GCATTGACTTTGTCGTGGGCCAGCTCAAGGAGAAGTACGTGCCCCCTCAA
ACCTTGCCCTTTATGAATTTGCTACTGCAAGGCAGTTGGTTGAACATATA
CAATTCCTGGACAGTGCGGCGTAAAGTGGCAGAGGCGCGCAGCCTGCTTG
CTGAGGATGAAAGAGAGGAGGAGGACGAGGACAATTTCCTGGATCTCTTG
GGTCCCGCTGAGGAGGAGGATTGGGCCGCAGGGGCGGCCGCGGCAGCCTT
AGGAGGCCCTGCACCGATGGCCGCCACGCAGATGGTGCTGAGTGATTTTC
AACAAATACTAATTCCAAACGTGACGAAAGGGTGCATCATCAATACAGTT
AAATGGGAGTGCACGGCGAGCGAGGAAGGGGATACTGGCTTGGCGGGGGC
CTTGGTCGTCCGCAGCAGCTACGAGGTCAACAGCCGAGGCTTATTAGAAA
TGGGGGAGGTGGAGCACGATATGAGCATGAATCGTGCCCCCCGTAACCCA
GATGCACTCATCCGGGCCGTGCAGCGGGTGGTGCCCTTCGACGCGTTCGA
CCCCAACGGGACCTTTGTAGAGACGGCCTTCTTAGACCACGAGCTCCGGG
TTACCTTGACCCACAGCACACGCTTCGGCGCAATCACGAGCCTATACGTA
CGCAACGGCACAGATCTCCAACGACAAATACAGCAGCATCTATTACAGGA
AGTGCAGTGACCGGCAGAAACAAAAGAAAAGACGATGTATTTTTCGTAGG
CAAAGCAGAGCCGTGAGGTTGGGTGTTATTTTCACTCGCTTGAGTGGACA
CCCCACCGCGCCCTAGCTCGTCAAATTAAATGAG back to topCoding sequence (CDS) from alignment at scaffold_9:318765..320148- >mRNA_4659 ID=mRNA_4659|Name=jgi.p|Nanoce1779_2|587385|organism=Nannochloropsis oceanica|type=CDS|length=996bp|location=Sequence derived from alignment at scaffold_9:318765..320148- (Nannochloropsis oceanica)
ATGGGTCGATTGCCAAGCATGCGTTGCCGGGCTGGCAGCAAAGCTAGGAA
GGGAATGCTCTTAATTGTTGGGCTGCCAGGAATTTGCCGTAGATCGTCTG
CCTTTCTTATTCCCAGACTCTGGAAGTGCCAAGTACTAGCAGCATCCACC
ACCACGGACCCCGCCTTTGCTATCGCGCCCACCAGCTCCGCCTTTTCGTC
CAGCATCAAGCACCGGGAGGAGCTTTTGACTCTGGTCACCATGCCGGAGG
ATGTCAGAGAAGGGAGGGAAGAATCCATCGCCCAGCGCATTGACTTTGTC
GTGGGCCAGCTCAAGGAGAAGTACGTGCCCCCTCAAACCTTGCCCTTTAT
GAATTTGCTACTGCAAGGCAGTTGGTTGAACATATACAATTCCTGGACAG
TGCGGCGTAAAGTGGCAGAGGCGCGCAGCCTGCTTGCTGAGGATGAAAGA
GAGGAGGAGGACGAGGACAATTTCCTGGATCTCTTGGGTCCCGCTGAGGA
GGAGGATTGGGCCGCAGGGGCGGCCGCGGCAGCCTTAGGAGGCCCTGCAC
CGATGGCCGCCACGCAGATGGTGCTGAGTGATTTTCAACAAATACTAATT
CCAAACGTGACGAAAGGGTGCATCATCAATACAGTTAAATGGGAGTGCAC
GGCGAGCGAGGAAGGGGATACTGGCTTGGCGGGGGCCTTGGTCGTCCGCA
GCAGCTACGAGGTCAACAGCCGAGGCTTATTAGAAATGGGGGAGGTGGAG
CACGATATGAGCATGAATCGTGCCCCCCGTAACCCAGATGCACTCATCCG
GGCCGTGCAGCGGGTGGTGCCCTTCGACGCGTTCGACCCCAACGGGACCT
TTGTAGAGACGGCCTTCTTAGACCACGAGCTCCGGGTTACCTTGACCCAC
AGCACACGCTTCGGCGCAATCACGAGCCTATACGTACGCAACGGCACAGA
TCTCCAACGACAAATACAGCAGCATCTATTACAGGAAGTGCAGTGA back to top
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