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Properties
| Property Name | Value |
|---|
| TranscriptId | 243127 |
| Track | FilteredModels2 |
| ProteinId | 243041 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:1128044..1131352 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_463 ID=mRNA_463|Name=jgi.p|Nanoce1779_2|243041|organism=Nannochloropsis oceanica|type=mRNA|length=2946bp
CTGCCTTGAGAGTGATCACCACAATTACGCCCACAGACCCCCAAGCACAG
GCAACACCTCGGAAACAGCATAATCATTTTTAAAATGAGTGCCAAACGAC
CTTGAGAGCAGTACTCTGGCCTTGGTCTGCTGTTATCTCGTCGCCAAGGC
CATCCAGTTACAATGAAGCGGAGATTGCTCCGGAACGGGGTTGCCTCACC
ATCGGGACGTGCGGCGGCTGCCATGGCCGTCGTGGCGGTGGCAACGGCCC
TTTCATGTATAATAGGCTCCACGCAAGCATTTAATGTACCATCCCAGTCG
TTCTCAGCATTGAGATCCGCAAGTCGGAGTAGTGGCAGCAGCGGTCGAGT
ACAACCTTTTACCACGAGTATGATGGCCTCGGGTACTTCCCCTGGAGGGG
GCGACGTCCTTGTCATCGGTGGTGGCCTCGCGGGCTTGTCCTCAGCCCTG
GAGCTCGCACAACGCGGGGCCAAGGTAGTGGTCGTTAACAGGGACGGGGG
TGAATCGGCTAGCATGGCAGCAGGGGGGATGCTTGCCCCCCAGGCGGAAC
GACTCCAGGCAGGGCCCTACTTGAATTTGTGCTTGCAAAGCCGCAACATG
TACACTGAATGGGCCGCAGAGCTTGAGGCTCGTTCAGGAGGGATTTCCAC
GGGTTTTGCTGCTGCAGGCGGATTTTTGGCACCTGCTTTTGAGGGAGATC
AGGTGGATGGGTGGGCTCCGCCGGCGGAGGCAGGACCCGCGTATCGTTTG
GACGCAAAACAGATGCGAGGGATGGAGCCGGCGTTGTCGGAGGAGGTAGT
GGGTGGATGGTGGTATCCTGATGATATGCAGGTCGACGCCCGTCGGCTTT
TTCGATCATTGAGGGAGGCCTGTGTGAGGGCTGGGGTGAGTGTGTTGGAG
GGGCCGGAGTGGGAAGTAGAGGCCCTGGTGTTTAACCCTGTCTTGCCTGC
CATTCAGGCCGTCAAAATGCGCGATGGCCGGCGCCTAGTCTTTAAAAAAG
TTGTAGTTGCGAACGGTGCGTGGATGAACAAGCTGCTGCCCGTACCCCTG
GGTCCTGTGAAGGGTCAGATGCTCTCTCTTCGGCCCAAAAAAGAGACGCC
TAGCCCCTTAAGCCGTGTCATCTTCGCAGAATCCTGCTACCTTATCCCCA
AGTCCGATGGCCGTCTCATTGTCGGTGCCACCGTTGAGCCTGGCCAATGG
GACCAACGTGTGACTGCGGGAGGAGTACACGAGCTGACGAAGCGTGCACT
GCGAATTTGTCCCGCCTTGGGGGAGCTCGAGGTGGAGGAGACATGGGCCG
GGTTGCGACCCACGACACCTGACACATTGCCGGTGTTGGGGCGGACACCG
TGGGAGAACCTCTTTGTCGCTGGCGGGTATTGGCGGAATGGCGTGTTGCT
GGCGCCGAGGACGGGGCAACTGGTCGCTGATTGTGTGGAGGGCCGAATGG
GTGCAGGTGACGAAGCCTTGTTGAAACATTTTGAATGGTTCCGATTCTTG
CCGAGCGTGGGAGGAGGAGGAGGAAGAGGAGGGGGAGGAGTGGGACCGGT
CGGGGCACGTCAAGCCACATCGGACGCGTCGGTTACTGCAGCAATTGCAG
CGGCAGCAGCGGGTGTGTCACCACCTGCAACCCTGGCAGGCTTCGAGCCT
AACCTATCTTCAGTCTCTGCCGTGCGTCGTGAGGCTCCAGTAACCCCCTC
CTCCCCTGCCTCCTTCTCTTCTTCGTCTGTCACGAACAGCGTCACCACAG
GGGTGCACAGCGATGATCCTTACATGGAATACGCGAGGCTGAAGTCCTCT
GCTAGCGTGCATGACACTGACGCTATCCTCCGGGAGGCGAGGAGGGTGAA
CAGGGAGGGCTTGGTAGGGTACGGCCAGGGGGAGGACGTAGTCGGCAAGG
CTGTGGCCTCCAAGTTCAACGTGGCAAGTGCGGATATGAAGGGAGGGGAA
TGGTCAGCCTTTGAGCATGCGGCGCAGGCTGGCATGCAAGATATGGAGAG
GTTTGATGTCGACTACTTGAAGGATGATTCGCACATGAGGAGGGAGGAAG
GGAATGAGGGAGGGGGGCATAGTGCTGGCCATACGGGGGGGCATACGGTT
TCAACGTCTGATTTTTCGCGGGAGATAGAAGGGGAGGACGAGAGTATTGA
GTCGTTGATGGCGCGATTAGGGTATGATTACGAAGACCCGCGGCAGGCGA
AGATTAATGATAAGGAAGCCCGGCAAGAGATGGCAAAGATGGGAATCAGC
CCCCCCCCGCCCACCGCGACGGACGTGCAGCGAAAGAAGAAGGAGTCTGA
GGGGGATGCGTACGAAGAATTTTACAGCACGGAGGTTCGTGAGAAGGTGG
GATGGGAGGTGGCGAAGCAACGCCAGCAGCAGCAGCAGCAAGAGGGTGGG
GATAGGGGTGAGCAGCAGCAGCATAAGGATGATCCGTACGCGGACTACGC
GAAACTGAGGGATGATGCAGAGAAGGAGGGTGTCATTCTCCAGGCTAGGC
GGACGAACAGAGAGGGCTTGGTGGGCTATGGGTTGAGGGAGGATGTGGTA
GGAAGGGAGGTGGCATCAAAATTCAATGTGCCTAGCGCGGGAGGGGTGGG
GGGGGGCGAATGGTCCGCATTTGAGGAGGCGGCAAGGCAAGGGCTGCAGG
ACTTCGGTCACTACGAGGACGTGGTGGCACAGGCGGCGTTTTCGGGGCCC
AGTGGGGTTGTTTCTTTAGCTAGTGGTAGGGATGGGATCGGGGGGGAGGG
GGGGGGGGGAGCAGGGGATCGAGGAGTTAATGGCGAGTTTGGGGTATGAA
TACGAGGACCCGCGTGTGGCCAAGGCCCAGGCGTTGGATGAGCGACGGCG
GGCTGCTGGTGAGACCCTGGGCCGGCAAAATCGAAGACCTCTACGACCGG
GTTCGCACCAATCAAGCAGCCGCCCGCCGTCGTCAAGGCCTCCCCC back to topprotein sequence of jgi.p|Nanoce1779_2|243041 >mRNA_463-protein ID=mRNA_463-protein|Name=jgi.p|Nanoce1779_2|243041|organism=Nannochloropsis oceanica|type=polypeptide|length=879bp
MKRRLLRNGVASPSGRAAAAMAVVAVATALSCIIGSTQAFNVPSQSFSAL
RSASRSSGSSGRVQPFTTSMMASGTSPGGGDVLVIGGGLAGLSSALELAQ
RGAKVVVVNRDGGESASMAAGGMLAPQAERLQAGPYLNLCLQSRNMYTEW
AAELEARSGGISTGFAAAGGFLAPAFEGDQVDGWAPPAEAGPAYRLDAKQ
MRGMEPALSEEVVGGWWYPDDMQVDARRLFRSLREACVRAGVSVLEGPEW
EVEALVFNPVLPAIQAVKMRDGRRLVFKKVVVANGAWMNKLLPVPLGPVK
GQMLSLRPKKETPSPLSRVIFAESCYLIPKSDGRLIVGATVEPGQWDQRV
TAGGVHELTKRALRICPALGELEVEETWAGLRPTTPDTLPVLGRTPWENL
FVAGGYWRNGVLLAPRTGQLVADCVEGRMGAGDEALLKHFEWFRFLPSVG
GGGGRGGGGVGPVGARQATSDASVTAAIAAAAAGVSPPATLAGFEPNLSS
VSAVRREAPVTPSSPASFSSSSVTNSVTTGVHSDDPYMEYARLKSSASVH
DTDAILREARRVNREGLVGYGQGEDVVGKAVASKFNVASADMKGGEWSAF
EHAAQAGMQDMERFDVDYLKDDSHMRREEGNEGGGHSAGHTGGHTVSTSD
FSREIEGEDESIESLMARLGYDYEDPRQAKINDKEARQEMAKMGISPPPP
TATDVQRKKKESEGDAYEEFYSTEVREKVGWEVAKQRQQQQQQEGGDRGE
QQQHKDDPYADYAKLRDDAEKEGVILQARRTNREGLVGYGLREDVVGREV
ASKFNVPSAGGVGGGEWSAFEEAARQGLQDFGHYEDVVAQAAFSGPSGVV
SLASGRDGIGGEGGGGAGDRGVNGEFGV* back to topmRNA from alignment at scaffold_3:1128044..1131352- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_463 ID=mRNA_463|Name=jgi.p|Nanoce1779_2|243041|organism=Nannochloropsis oceanica|type=mRNA|length=3309bp|location=Sequence derived from alignment at scaffold_3:1128044..1131352- (Nannochloropsis oceanica)
CTGCCTTGAGAGTGATCACCACAATTACGCCCACAGACCCCCAAGCACAG
GCAACACCTCGGAAACAGCATAATCATTTTTAAAATGTGCGGAAGCCGTG
GTTTAAAGTGTCTGGGAAGCATTGTGGCTGGACAATGACGCTGCTACTAC
TACCCCTCGTAGCCTCCTTTCCCGTCCTGGCCATGTTCAATCCCGCGGCA
GCATCGACTCACACACAACACTCACGCCCCCCATACACATCCTTAGGAGT
GCCAAACGACCTTGAGAGCAGTACTCTGGCCTTGGTCTGCTGTTATCTCG
TCGCCAAGGCCATCCAGTTACAATGAAGCGGAGATTGCTCCGGAACGGGG
TTGCCTCACCATCGGGACGTGCGGCGGCTGCCATGGCCGTCGTGGCGGTG
GCAACGGCCCTTTCATGTATAATAGGCTCCACGCAAGCATTTAATGTACC
ATCCCAGTCGTTCTCAGCATTGAGATCCGCAAGTCGGAGTAGTGGCAGCA
GCGGTCGAGTACAACCTTTTACCACGAGTATGATGGCCTCGGGTACTTCC
CCTGGAGGGGGCGACGTCCTTGTCATCGGTGGTGGCCTCGCGGGCTTGTC
CTCAGCCCTGGAGCTCGCACAACGCGGGGCCAAGGTAGTGGTCGTTAACA
GGGACGGGGGTGAATCGGCTAGCATGGCAGCAGGGGGGATGCTTGCCCCC
CAGGCGGAACGACTCCAGGCAGGGCCCTACTTGAATTTGTGCTTGCAAAG
CCGCAACATGTACACTGAATGGGCCGCAGAGCTTGAGGCTCGTTCAGGAG
GGATTTCCACGGGTTTTGCTGCTGCAGGCGGATTTTTGGCACCTGCTTTT
GAGGGAGATCAGGTGGATGGGTGGGCTCCGCCGGCGGAGGCAGGACCCGC
GTATCGTTTGGACGCAAAACAGATGCGAGGGATGGAGCCGGCGTTGTCGG
AGGAGGTAGTGGGTGGATGGTGGTATCCTGATGATATGCAGGTCGACGCC
CGTCGGCTTTTTCGATCATTGAGGGAGGCCTGTGTGAGGGCTGGGGTGAG
TGTGTTGGAGGGGCCGGAGTGGGAAGTAGAGGCCCTGGTGTTTAACCCTG
TCTTGCCTGCCATTCAGGCCGTCAAAATGCGCGATGGCCGGCGCCTAGTC
TTTAAAAAAGTTGTAGTTGCGAACGGTGCGTGGATGAACAAGCTGCTGCC
CGTACCCCTGGGTCCTGTGAAGGGTCAGATGCTCTCTCTTCGGCCCAAAA
AAGAGACGCCTAGCCCCTTAAGCCGTGTCATCTTCGCAGAATCCTGCTAC
CTTATCCCCAAGTCCGATGGCCGTCTCATTGTCGGTGCCACCGTTGAGCC
TGGCCAATGGGACCAACGTGTGACTGCGGGAGGAGTACACGAGCTGACGA
AGCGTGCACTGCGAATTTGTCCCGCCTTGGGGGAGCTCGAGGTGGAGGAG
ACATGGGCCGGGTTGCGACCCACGACACCTGACACATTGCCGGTGTTGGG
GCGGACACCGTGGGAGAACCTCTTTGTCGCTGGCGGGTATTGGCGGAATG
GCGTGTTGCTGGCGCCGAGGACGGGGCAACTGGTCGCTGATTGTGTGGAG
GGCCGAATGGGTGCAGGTGACGAAGCCTTGTTGAAACATTTTGAATGGTT
CCGATTCTTGCCGAGCGTGGGAGGAGGAGGAGGAAGAGGAGGGGGAGGAG
TGGGACCGGTCGGGGCACGTCAAGCCACATCGGACGCGTCGGTTACTGCA
GCAATTGCAGCGGCAGCAGCGGGTGTGTCACCACCTGCAACCCTGGCAGG
CTTCGAGCCTAACCTATCTTCAGTCTCTGCCGTGCGTCGTGAGGCTCCAG
TAACCCCCTCCTCCCCTGCCTCCTTCTCTTCTTCGTCTGTCACGAACAGC
GTCACCACAGGGGTGCACAGCGATGATCCTTACATGGAATACGCGAGGCT
GAAGTCCTCTGCTAGCGTGCATGACACTGACGCTATCCTCCGGGAGGCGA
GGAGGGTGAACAGGGAGGGCTTGGTAGGGTACGGCCAGGGGGAGGACGTA
GTCGGCAAGGCTGTGGCCTCCAAGTTCAACGTGGCAAGTGCGGATATGAA
GGGAGGGGAATGGTCAGCCTTTGAGCATGCGGCGCAGGCTGGCATGCAAG
ATATGGAGAGGTTTGATGTCGACTACTTGAAGGATGATTCGCACATGAGG
AGGGAGGAAGGGAATGAGGGAGGGGGGCATAGTGCTGGCCATACGGGGGG
GCATACGGTTTCAACGTCTGATTTTTCGCGGGAGATAGAAGGGGAGGACG
AGAGTATTGAGTCGTTGATGGCGCGATTAGGGTATGATTACGAAGACCCG
CGGCAGGCGAAGATTAATGATAAGGAAGCCCGGCAAGAGATGGCAAAGAT
GGGAATCAGCCCCCCCCCGCCCACCGCGACGGACGTGCAGCGAAAGAAGA
AGGAGTCTGAGGGGGATGCGTACGAAGAATTTTACAGCACGGAGGTTCGT
GAGAAGGTGGGATGGGAGGTGGCGAAGCAACGCCAGCAGCAGCAGCAGCA
AGAGGGTGGGGATAGGGGTGAGCAGCAGCAGCATAAGGATGATCCGTACG
CGGACTACGCGAAACTGAGGGATGATGCAGAGAAGGAGGGTGTCATTCTC
CAGGCTAGGCGGACGAACAGAGAGGGCTTGGTGGGCTATGGGTTGAGGGA
GGATGTGGTAGGAAGGGAGGTGGCATCAAAATTCAATGTGCCTAGCGCGG
GAGGGGTGGGGGGGGGCGAATGGTCCGCATTTGAGGAGGCGGCAAGGCAA
GGGCTGCAGGACTTCGGTCACTACGAGGACGTGGTGGCACAGGCGGCGTT
TTCGGGGCCCAGTGGGGTTGTTTCTTTAGCTAGTGGTAGGGATGGGATCG
GGGGGGAGGGGGGGGGGGGAGCAGGGGATCGAGGAGTTAATGGCGAGTTT
GGGGTATGAATACGAGGACCCGCGTGTGGCCAAGGCCCAGGCGTTGGATG
AGCGACGGCGGGCTGCTGGTGAGACCCAAATAGGAGGAGAAGCACGGACA
GGGCCAGGATCTGCAGCAGCAGCAGTAGCAGCAGCAGCCGCACCGCAACC
CTTTACGCCCTCCCCCCCACCACCACCATCCCGTCCCCAAGATCCTTTCA
TGCCATCACCATCGCAGAGCTCATCGTCACCGGATGCCCAACCACCCCTC
CCTCCCCCCCGCACCACCACCCCACCTCCCTGGGCCGGCAAAATCGAAGA
CCTCTACGACCGGGTTCGCACCAATCAAGCAGCCGCCCGCCGTCGTCAAG
GCCTCCCCC back to topCoding sequence (CDS) from alignment at scaffold_3:1128044..1131352- >mRNA_463 ID=mRNA_463|Name=jgi.p|Nanoce1779_2|243041|organism=Nannochloropsis oceanica|type=CDS|length=2637bp|location=Sequence derived from alignment at scaffold_3:1128044..1131352- (Nannochloropsis oceanica)
ATGAAGCGGAGATTGCTCCGGAACGGGGTTGCCTCACCATCGGGACGTGC
GGCGGCTGCCATGGCCGTCGTGGCGGTGGCAACGGCCCTTTCATGTATAA
TAGGCTCCACGCAAGCATTTAATGTACCATCCCAGTCGTTCTCAGCATTG
AGATCCGCAAGTCGGAGTAGTGGCAGCAGCGGTCGAGTACAACCTTTTAC
CACGAGTATGATGGCCTCGGGTACTTCCCCTGGAGGGGGCGACGTCCTTG
TCATCGGTGGTGGCCTCGCGGGCTTGTCCTCAGCCCTGGAGCTCGCACAA
CGCGGGGCCAAGGTAGTGGTCGTTAACAGGGACGGGGGTGAATCGGCTAG
CATGGCAGCAGGGGGGATGCTTGCCCCCCAGGCGGAACGACTCCAGGCAG
GGCCCTACTTGAATTTGTGCTTGCAAAGCCGCAACATGTACACTGAATGG
GCCGCAGAGCTTGAGGCTCGTTCAGGAGGGATTTCCACGGGTTTTGCTGC
TGCAGGCGGATTTTTGGCACCTGCTTTTGAGGGAGATCAGGTGGATGGGT
GGGCTCCGCCGGCGGAGGCAGGACCCGCGTATCGTTTGGACGCAAAACAG
ATGCGAGGGATGGAGCCGGCGTTGTCGGAGGAGGTAGTGGGTGGATGGTG
GTATCCTGATGATATGCAGGTCGACGCCCGTCGGCTTTTTCGATCATTGA
GGGAGGCCTGTGTGAGGGCTGGGGTGAGTGTGTTGGAGGGGCCGGAGTGG
GAAGTAGAGGCCCTGGTGTTTAACCCTGTCTTGCCTGCCATTCAGGCCGT
CAAAATGCGCGATGGCCGGCGCCTAGTCTTTAAAAAAGTTGTAGTTGCGA
ACGGTGCGTGGATGAACAAGCTGCTGCCCGTACCCCTGGGTCCTGTGAAG
GGTCAGATGCTCTCTCTTCGGCCCAAAAAAGAGACGCCTAGCCCCTTAAG
CCGTGTCATCTTCGCAGAATCCTGCTACCTTATCCCCAAGTCCGATGGCC
GTCTCATTGTCGGTGCCACCGTTGAGCCTGGCCAATGGGACCAACGTGTG
ACTGCGGGAGGAGTACACGAGCTGACGAAGCGTGCACTGCGAATTTGTCC
CGCCTTGGGGGAGCTCGAGGTGGAGGAGACATGGGCCGGGTTGCGACCCA
CGACACCTGACACATTGCCGGTGTTGGGGCGGACACCGTGGGAGAACCTC
TTTGTCGCTGGCGGGTATTGGCGGAATGGCGTGTTGCTGGCGCCGAGGAC
GGGGCAACTGGTCGCTGATTGTGTGGAGGGCCGAATGGGTGCAGGTGACG
AAGCCTTGTTGAAACATTTTGAATGGTTCCGATTCTTGCCGAGCGTGGGA
GGAGGAGGAGGAAGAGGAGGGGGAGGAGTGGGACCGGTCGGGGCACGTCA
AGCCACATCGGACGCGTCGGTTACTGCAGCAATTGCAGCGGCAGCAGCGG
GTGTGTCACCACCTGCAACCCTGGCAGGCTTCGAGCCTAACCTATCTTCA
GTCTCTGCCGTGCGTCGTGAGGCTCCAGTAACCCCCTCCTCCCCTGCCTC
CTTCTCTTCTTCGTCTGTCACGAACAGCGTCACCACAGGGGTGCACAGCG
ATGATCCTTACATGGAATACGCGAGGCTGAAGTCCTCTGCTAGCGTGCAT
GACACTGACGCTATCCTCCGGGAGGCGAGGAGGGTGAACAGGGAGGGCTT
GGTAGGGTACGGCCAGGGGGAGGACGTAGTCGGCAAGGCTGTGGCCTCCA
AGTTCAACGTGGCAAGTGCGGATATGAAGGGAGGGGAATGGTCAGCCTTT
GAGCATGCGGCGCAGGCTGGCATGCAAGATATGGAGAGGTTTGATGTCGA
CTACTTGAAGGATGATTCGCACATGAGGAGGGAGGAAGGGAATGAGGGAG
GGGGGCATAGTGCTGGCCATACGGGGGGGCATACGGTTTCAACGTCTGAT
TTTTCGCGGGAGATAGAAGGGGAGGACGAGAGTATTGAGTCGTTGATGGC
GCGATTAGGGTATGATTACGAAGACCCGCGGCAGGCGAAGATTAATGATA
AGGAAGCCCGGCAAGAGATGGCAAAGATGGGAATCAGCCCCCCCCCGCCC
ACCGCGACGGACGTGCAGCGAAAGAAGAAGGAGTCTGAGGGGGATGCGTA
CGAAGAATTTTACAGCACGGAGGTTCGTGAGAAGGTGGGATGGGAGGTGG
CGAAGCAACGCCAGCAGCAGCAGCAGCAAGAGGGTGGGGATAGGGGTGAG
CAGCAGCAGCATAAGGATGATCCGTACGCGGACTACGCGAAACTGAGGGA
TGATGCAGAGAAGGAGGGTGTCATTCTCCAGGCTAGGCGGACGAACAGAG
AGGGCTTGGTGGGCTATGGGTTGAGGGAGGATGTGGTAGGAAGGGAGGTG
GCATCAAAATTCAATGTGCCTAGCGCGGGAGGGGTGGGGGGGGGCGAATG
GTCCGCATTTGAGGAGGCGGCAAGGCAAGGGCTGCAGGACTTCGGTCACT
ACGAGGACGTGGTGGCACAGGCGGCGTTTTCGGGGCCCAGTGGGGTTGTT
TCTTTAGCTAGTGGTAGGGATGGGATCGGGGGGGAGGGGGGGGGGGGAGC
AGGGGATCGAGGAGTTAATGGCGAGTTTGGGGTATGA back to top
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