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Properties
| Property Name | Value |
| TranscriptId | 587312 |
| Track | FilteredModels2 |
| ProteinId | 587226 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_9 | supercontig | scaffold_9:220454..223397 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4622 ID=mRNA_4622|Name=jgi.p|Nanoce1779_2|587226|organism=Nannochloropsis oceanica|type=mRNA|length=2842bp ACAGCAAGGAACAACAACAACAGACACGACGACAACAACTACAAAAAACG ACGACGATCAGGGCTACGGCGTACTGCCATGATGGTGAAGCTATCAAGAA TAGTTGCATTCTTAGGTGTGATGCGGAAATCAAAGCGAAGGCCACCATCA CTCCCGCCACTTCTGCCTCCCTTCGTAGTCCTCGCCGTGGTCCTCGCCTG CAGCCCTTTCCTTCTTGTACATGCCTTCCTCCGCATATCCTCTCCCTCCA TTCTTTCTAACATAGCCTCTTCCTCTTTCCTCCGAATAAGACTACAAGCG ATCACTACGTCTGATATGTGGCATTCCCCTTTAACCTCATCCTCTTCCTC GCATTCGTCCTCGTCCGCGTCTACCTTGTCTGTCTCCCCTGGTGCTATCT CTGTGCCACATACACCACCACCGCCGTCCTCCCAATTCATCACCTCCGCC GCAGCCGTCGGCGCCGTCATTAGCTCTTCACAAACAGCCCCAGCGATCTC CCCACCATCAGCAGTCAGAAGAAGGGCGGTTCTTCCCCCCATCACTACCA AATCCCAACTCACGCTCCTGCAAGATCGTTGGCCTAACAACGCAGCCGCA CCAACAGCAGGAGCTGCCACAGCAGCAGCCGCAGCAGCAGGAGGATCAGG AGCAGGAACAGCGCCGCCTGTTTTCAAGCGGAAAAAGGAATCACCGTCAC AACAGCAGCAAAAGCAGAAACGGCGGCAGCAACCCCCTGTCCCCCATACT CCGGCCATCAAAAATCTCGTCGCCCTCCTCTCCGACGAACTCCCCTCGCT CTCCCCTTCCCTCCTTCTCCCCCTCCTCCCCCCCTCCTTCCTCCATGATC CCGACATTGAGCAAGTCAGGATCCGCCTCCGCTTCCTCAAACAAGCCCTT CCTGGCGTCAATCTTTCCCAGGTGCTCCCTGAAGCCCCCCGTCTGCTCTC CTACCACGGCCCAAATGCCCCCGAAATGGAACGTCTAATCTCCGAGAGGT ACCACCGCCTCATCAGCGTCACACAAAACAAACAAGACGCCATCGCCTTG ATAGAGGCAGCACCACGCGCCCTTTTATTGAGAGATTTCGATTCGCGGGT CCTGCCCTACCTGGAGCTCTTCACTTCCGCCCTTCCCGGCCTCAAACCCT CCTACCTCCTTGCCAAGCACCCAGTGCTGCTGAACAAGGGCATAAACTCC ACCATCCTCCCCCGCCTCGCCGCACTTCCGTTTCTCCTTCCATCTTCCCT ATCCCCCCTGTCTCCCAAGGACCTGGCCTCCTTGGTCCGCCCCTACCCCG CCCTTTTCACCCTCCCCCTCCCCTCCCTCTCCACCCGCCTCGCCTCCCTC TCCCTTCTCCTCCCCCCCTCTCTACTCCTCCCCACCCTTTGCCAGCATCC TCGCGCTTGGACTGCCGACCTGTCGGAGGTCATTGCTCCCCAGCTCCACC TCCTCCTCGCCTCACTGGGCCCCACCACCACATCGTCCATCCTCCACCAC CTCCCCTCCATCCTCTACCACCCACCCTCAGCGCTCACGCAGAAACTCGA CCTCCTCTCCTCCCTCTTAGGGGGTTCTGTAGGTGGCGTGAACTTGCTGC TGTCCAAGAATCCCATGATCCTCGCAATGGATGTGACGGCCAACGTGGCG CCCAAGTTGCGATTCGTCCGCTCGCTCTTCCCGGACCTGGAGGAGGATGA CTTCGTGGCCCTCCTCGGGACGGAGGCAGGGAGTCAATGCCTGACCGCGG CCTTTGGGAGGCTGGGACGACTTTCATATTTAACGCAAGTTCGGCCGGGA TTAAGCTTGGAGGAGGGCATGAAGCTGGTGGTGTGCCCGAGTGAGGAGCT GCGGCGGCTCTACCCGGGCTACGAGAATTTTTTAGAAGATCGGATCGAAC CCCGTTTCCCCACATACACATGGGAGCAGTTGTGTGCGTTGCCGTTTGCC TTGCGGGAGCAGGCGCACGGGGAATTGCTGCATGGTGCGTATTCAAAAAA CGGCGGAAGTAGGTGACGGACCCTGCTGGTGGGAAGGAGGAAAGAAGGCA TAAAGGGAGGGAAGATAAGGAAGGTAAGTTGGAAATTGAAAAGAAATGTC CCATTCTAATTACAATGAGTGGTTTGAATATCACACTGGAAAGAATTGGA GGGCGGGAAGGCTGAAACGGTAGAGCAGAAGGGTGAGTCCCTCCTTCCTT TCTTCCTTTCTTTCCTCGTCTGTGTTTTTCTGGATAGCAAGGCCTGAGGA GGACAGTCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGTAGC AGTAGACGTAATACTAGTACCACAGAGAGTTTGGGGACGACCCAAAAACT AACAACGCTAGAGAGAAAACAAAAGATAAGTAGAAGAGAGAACGAACCAA AGGAGGAAAAAAAAAAAAAAAGGAGCAAATTTTGCGCAAGTGCGGGTCCA AGTCACTTTTATGTGCTTGCGTCTGGCGTTCTTACGACTATAACTACTGG TGCTATAGCTTTCTCCCCCTTTCTGTGAACACAATTGCCATTGCAGGTGC CGCTACAACTATTTCTCTTCTCACCATCTCGCTCCCTCTCTCCCATTCCA TCCCTCTCCCTCTACCTCTCCTTCTCTTCTCCCCTCCTTCCCTTTTCCTC CCTCTTTCCTTGTCCACTTCTATCCTTAGCCCCCTCCTCCATATACCAGT ATTAGATCATTTAAAATATTTCGCTAAGACAATTTGTTCACTCTCTCCTT CCCTCCCTCTCCCTCCCTCCCTCCCTTTCTCCCCTCCTCCCTGCTCCTAT TCCGGAGCCAATAACTCCGGGTGTGATTTGCTCACCTCCTCC back to topprotein sequence of jgi.p|Nanoce1779_2|587226 >mRNA_4622-protein ID=mRNA_4622-protein|Name=jgi.p|Nanoce1779_2|587226|organism=Nannochloropsis oceanica|type=polypeptide|length=646bp MMVKLSRIVAFLGVMRKSKRRPPSLPPLLPPFVVLAVVLACSPFLLVHAF LRISSPSILSNIASSSFLRIRLQAITTSDMWHSPLTSSSSSHSSSSASTL SVSPGAISVPHTPPPPSSQFITSAAAVGAVISSSQTAPAISPPSAVRRRA VLPPITTKSQLTLLQDRWPNNAAAPTAGAATAAAAAAGGSGAGTAPPVFK RKKESPSQQQQKQKRRQQPPVPHTPAIKNLVALLSDELPSLSPSLLLPLL PPSFLHDPDIEQVRIRLRFLKQALPGVNLSQVLPEAPRLLSYHGPNAPEM ERLISERYHRLISVTQNKQDAIALIEAAPRALLLRDFDSRVLPYLELFTS ALPGLKPSYLLAKHPVLLNKGINSTILPRLAALPFLLPSSLSPLSPKDLA SLVRPYPALFTLPLPSLSTRLASLSLLLPPSLLLPTLCQHPRAWTADLSE VIAPQLHLLLASLGPTTTSSILHHLPSILYHPPSALTQKLDLLSSLLGGS VGGVNLLLSKNPMILAMDVTANVAPKLRFVRSLFPDLEEDDFVALLGTEA GSQCLTAAFGRLGRLSYLTQVRPGLSLEEGMKLVVCPSEELRRLYPGYEN FLEDRIEPRFPTYTWEQLCALPFALREQAHGELLHGAYSKNGGSR* back to topmRNA from alignment at scaffold_9:220454..223397+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4622 ID=mRNA_4622|Name=jgi.p|Nanoce1779_2|587226|organism=Nannochloropsis oceanica|type=mRNA|length=2944bp|location=Sequence derived from alignment at scaffold_9:220454..223397+ (Nannochloropsis oceanica) ACAGCAAGGAACAACAACAACAGACACGACGACAACAACTACAAAAAACG
ACGACGATCAGGGCTACGGCGTACTGCCATGATGGTGAAGCTATCAAGAA
TAGGTAAGCTTAACTAGATTTGATCAGACTCCTTCCGGCCTTGCCTCCCT
TCCCAATCTCGATCTCATACCGTCTCTCCCTTGCAACATCATTATCACAC
CCAAGTTGCATTCTTAGGTGTGATGCGGAAATCAAAGCGAAGGCCACCAT
CACTCCCGCCACTTCTGCCTCCCTTCGTAGTCCTCGCCGTGGTCCTCGCC
TGCAGCCCTTTCCTTCTTGTACATGCCTTCCTCCGCATATCCTCTCCCTC
CATTCTTTCTAACATAGCCTCTTCCTCTTTCCTCCGAATAAGACTACAAG
CGATCACTACGTCTGATATGTGGCATTCCCCTTTAACCTCATCCTCTTCC
TCGCATTCGTCCTCGTCCGCGTCTACCTTGTCTGTCTCCCCTGGTGCTAT
CTCTGTGCCACATACACCACCACCGCCGTCCTCCCAATTCATCACCTCCG
CCGCAGCCGTCGGCGCCGTCATTAGCTCTTCACAAACAGCCCCAGCGATC
TCCCCACCATCAGCAGTCAGAAGAAGGGCGGTTCTTCCCCCCATCACTAC
CAAATCCCAACTCACGCTCCTGCAAGATCGTTGGCCTAACAACGCAGCCG
CACCAACAGCAGGAGCTGCCACAGCAGCAGCCGCAGCAGCAGGAGGATCA
GGAGCAGGAACAGCGCCGCCTGTTTTCAAGCGGAAAAAGGAATCACCGTC
ACAACAGCAGCAAAAGCAGAAACGGCGGCAGCAACCCCCTGTCCCCCATA
CTCCGGCCATCAAAAATCTCGTCGCCCTCCTCTCCGACGAACTCCCCTCG
CTCTCCCCTTCCCTCCTTCTCCCCCTCCTCCCCCCCTCCTTCCTCCATGA
TCCCGACATTGAGCAAGTCAGGATCCGCCTCCGCTTCCTCAAACAAGCCC
TTCCTGGCGTCAATCTTTCCCAGGTGCTCCCTGAAGCCCCCCGTCTGCTC
TCCTACCACGGCCCAAATGCCCCCGAAATGGAACGTCTAATCTCCGAGAG
GTACCACCGCCTCATCAGCGTCACACAAAACAAACAAGACGCCATCGCCT
TGATAGAGGCAGCACCACGCGCCCTTTTATTGAGAGATTTCGATTCGCGG
GTCCTGCCCTACCTGGAGCTCTTCACTTCCGCCCTTCCCGGCCTCAAACC
CTCCTACCTCCTTGCCAAGCACCCAGTGCTGCTGAACAAGGGCATAAACT
CCACCATCCTCCCCCGCCTCGCCGCACTTCCGTTTCTCCTTCCATCTTCC
CTATCCCCCCTGTCTCCCAAGGACCTGGCCTCCTTGGTCCGCCCCTACCC
CGCCCTTTTCACCCTCCCCCTCCCCTCCCTCTCCACCCGCCTCGCCTCCC
TCTCCCTTCTCCTCCCCCCCTCTCTACTCCTCCCCACCCTTTGCCAGCAT
CCTCGCGCTTGGACTGCCGACCTGTCGGAGGTCATTGCTCCCCAGCTCCA
CCTCCTCCTCGCCTCACTGGGCCCCACCACCACATCGTCCATCCTCCACC
ACCTCCCCTCCATCCTCTACCACCCACCCTCAGCGCTCACGCAGAAACTC
GACCTCCTCTCCTCCCTCTTAGGGGGTTCTGTAGGTGGCGTGAACTTGCT
GCTGTCCAAGAATCCCATGATCCTCGCAATGGATGTGACGGCCAACGTGG
CGCCCAAGTTGCGATTCGTCCGCTCGCTCTTCCCGGACCTGGAGGAGGAT
GACTTCGTGGCCCTCCTCGGGACGGAGGCAGGGAGTCAATGCCTGACCGC
GGCCTTTGGGAGGCTGGGACGACTTTCATATTTAACGCAAGTTCGGCCGG
GATTAAGCTTGGAGGAGGGCATGAAGCTGGTGGTGTGCCCGAGTGAGGAG
CTGCGGCGGCTCTACCCGGGCTACGAGAATTTTTTAGAAGATCGGATCGA
ACCCCGTTTCCCCACATACACATGGGAGCAGTTGTGTGCGTTGCCGTTTG
CCTTGCGGGAGCAGGCGCACGGGGAATTGCTGCATGGTGCGTATTCAAAA
AACGGCGGAAGTAGGTGACGGACCCTGCTGGTGGGAAGGAGGAAAGAAGG
CATAAAGGGAGGGAAGATAAGGAAGGTAAGTTGGAAATTGAAAAGAAATG
TCCCATTCTAATTACAATGAGTGGTTTGAATATCACACTGGAAAGAATTG
GAGGGCGGGAAGGCTGAAACGGTAGAGCAGAAGGGTGAGTCCCTCCTTCC
TTTCTTCCTTTCTTTCCTCGTCTGTGTTTTTCTGGATAGCAAGGCCTGAG
GAGGACAGTCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGTA
GCAGTAGACGTAATACTAGTACCACAGAGAGTTTGGGGACGACCCAAAAA
CTAACAACGCTAGAGAGAAAACAAAAGATAAGTAGAAGAGAGAACGAACC
AAAGGAGGAAAAAAAAAAAAAAAGGAGCAAATTTTGCGCAAGTGCGGGTC
CAAGTCACTTTTATGTGCTTGCGTCTGGCGTTCTTACGACTATAACTACT
GGTGCTATAGCTTTCTCCCCCTTTCTGTGAACACAATTGCCATTGCAGGT
GCCGCTACAACTATTTCTCTTCTCACCATCTCGCTCCCTCTCTCCCATTC
CATCCCTCTCCCTCTACCTCTCCTTCTCTTCTCCCCTCCTTCCCTTTTCC
TCCCTCTTTCCTTGTCCACTTCTATCCTTAGCCCCCTCCTCCATATACCA
GTATTAGATCATTTAAAATATTTCGCTAAGACAATTTGTTCACTCTCTCC
TTCCCTCCCTCTCCCTCCCTCCCTCCCTTTCTCCCCTCCTCCCTGCTCCT
ATTCCGGAGCCAATAACTCCGGGTGTGATTTGCTCACCTCCTCC back to topCoding sequence (CDS) from alignment at scaffold_9:220454..223397+ >mRNA_4622 ID=mRNA_4622|Name=jgi.p|Nanoce1779_2|587226|organism=Nannochloropsis oceanica|type=CDS|length=3876bp|location=Sequence derived from alignment at scaffold_9:220454..223397+ (Nannochloropsis oceanica) ATGATGGTGAAGCTATCAAGAATAGTTGCATTCTTAGGTGTGATGCGGAA ATCAAAGCGAAGGCCACCATCACTCCCGCCACTTCTGCCTCCCTTCGTAG TCCTCGCCGTGGTCCTCGCCTGCAGCCCTTTCCTTCTTGTACATGCCTTC CTCCGCATATCCTCTCCCTCCATTCTTTCTAACATAGCCTCTTCCTCTTT CCTCCGAATAAGACTACAAGCGATCACTACGTCTGATATGTGGCATTCCC CTTTAACCTCATCCTCTTCCTCGCATTCGTCCTCGTCCGCGTCTACCTTG TCTGTCTCCCCTGGTGCTATCTCTGTGCCACATACACCACCACCGCCGTC CTCCCAATTCATCACCTCCGCCGCAGCCGTCGGCGCCGTCATTAGCTCTT CACAAACAGCCCCAGCGATCTCCCCACCATCAGCAGTCAGAAGAAGGGCG GTTCTTCCCCCCATCACTACCAAATCCCAACTCACGCTCCTGCAAGATCG TTGGCCTAACAACGCAGCCGCACCAACAGCAGGAGCTGCCACAGCAGCAG CCGCAGCAGCAGGAGGATCAGGAGCAGGAACAGCGCCGCCTGTTTTCAAG CGGAAAAAGGAATCACCGTCACAACAGCAGCAAAAGCAGAAACGGCGGCA GCAACCCCCTGTCCCCCATACTCCGGCCATCAAAAATCTCGTCGCCCTCC TCTCCGACGAACTCCCCTCGCTCTCCCCTTCCCTCCTTCTCCCCCTCCTC CCCCCCTCCTTCCTCCATGATCCCGACATTGAGCAAGTCAGGATCCGCCT CCGCTTCCTCAAACAAGCCCTTCCTGGCGTCAATCTTTCCCAGGTGCTCC CTGAAGCCCCCCGTCTGCTCTCCTACCACGGCCCAAATGCCCCCGAAATG GAACGTCTAATCTCCGAGAGGTACCACCGCCTCATCAGCGTCACACAAAA CAAACAAGACGCCATCGCCTTGATAGAGGCAGCACCACGCGCCCTTTTAT TGAGAGATTTCGATTCGCGGGTCCTGCCCTACCTGGAGCTCTTCACTTCC GCCCTTCCCGGCCTCAAACCCTCCTACCTCCTTGCCAAGCACCCAGTGCT GCTGAACAAGGGCATAAACTCCACCATCCTCCCCCGCCTCGCCGCACTTC CGTTTCTCCTTCCATCTTCCCTATCCCCCCTGTCTCCCAAGGACCTGGCC TCCTTGGTCCGCCCCTACCCCGCCCTTTTCACCCTCCCCCTCCCCTCCCT CTCCACCCGCCTCGCCTCCCTCTCCCTTCTCCTCCCCCCCTCTCTACTCC TCCCCACCCTTTGCCAGCATCCTCGCGCTTGGACTGCCGACCTGTCGGAG GTCATTGCTCCCCAGCTCCACCTCCTCCTCGCCTCACTGGGCCCCACCAC CACATCGTCCATCCTCCACCACCTCCCCTCCATCCTCTACCACCCACCCT CAGCGCTCACGCAGAAACTCGACCTCCTCTCCTCCCTCTTAGGGGGTTCT GTAGGTGGCGTGAACTTGCTGCTGTCCAAGAATCCCATGATCCTCGCAAT GGATGTGACGGCCAACGTGGCGCCCAAGTTGCGATTCGTCCGCTCGCTCT TCCCGGACCTGGAGGAGGATGACTTCGTGGCCCTCCTCGGGACGGAGGCA GGGAGTCAATGCCTGACCGCGGCCTTTGGGAGGCTGGGACGACTTTCATA TTTAACGCAAGTTCGGCCGGGATTAAGCTTGGAGGAGGGCATGAAGCTGG TGGTGTGCCCGAGTGAGGAGCTGCGGCGGCTCTACCCGGGCTACGAGAAT TTTTTAGAAGATCGGATCGAACCCCGTTTCCCCACATACACATGGGAGCA GTTGTGTGCGTTGCCGTTTGCCTTGCGGGAGCAGGCGCACGGGGAATTGC TGCATGGTGCGTATTCAAAAAACGGCGGAAGTAGGTGAATGATGGTGAAG CTATCAAGAATAGTTGCATTCTTAGGTGTGATGCGGAAATCAAAGCGAAG GCCACCATCACTCCCGCCACTTCTGCCTCCCTTCGTAGTCCTCGCCGTGG TCCTCGCCTGCAGCCCTTTCCTTCTTGTACATGCCTTCCTCCGCATATCC TCTCCCTCCATTCTTTCTAACATAGCCTCTTCCTCTTTCCTCCGAATAAG ACTACAAGCGATCACTACGTCTGATATGTGGCATTCCCCTTTAACCTCAT CCTCTTCCTCGCATTCGTCCTCGTCCGCGTCTACCTTGTCTGTCTCCCCT GGTGCTATCTCTGTGCCACATACACCACCACCGCCGTCCTCCCAATTCAT CACCTCCGCCGCAGCCGTCGGCGCCGTCATTAGCTCTTCACAAACAGCCC CAGCGATCTCCCCACCATCAGCAGTCAGAAGAAGGGCGGTTCTTCCCCCC ATCACTACCAAATCCCAACTCACGCTCCTGCAAGATCGTTGGCCTAACAA CGCAGCCGCACCAACAGCAGGAGCTGCCACAGCAGCAGCCGCAGCAGCAG GAGGATCAGGAGCAGGAACAGCGCCGCCTGTTTTCAAGCGGAAAAAGGAA TCACCGTCACAACAGCAGCAAAAGCAGAAACGGCGGCAGCAACCCCCTGT CCCCCATACTCCGGCCATCAAAAATCTCGTCGCCCTCCTCTCCGACGAAC TCCCCTCGCTCTCCCCTTCCCTCCTTCTCCCCCTCCTCCCCCCCTCCTTC CTCCATGATCCCGACATTGAGCAAGTCAGGATCCGCCTCCGCTTCCTCAA ACAAGCCCTTCCTGGCGTCAATCTTTCCCAGGTGCTCCCTGAAGCCCCCC GTCTGCTCTCCTACCACGGCCCAAATGCCCCCGAAATGGAACGTCTAATC TCCGAGAGGTACCACCGCCTCATCAGCGTCACACAAAACAAACAAGACGC CATCGCCTTGATAGAGGCAGCACCACGCGCCCTTTTATTGAGAGATTTCG ATTCGCGGGTCCTGCCCTACCTGGAGCTCTTCACTTCCGCCCTTCCCGGC CTCAAACCCTCCTACCTCCTTGCCAAGCACCCAGTGCTGCTGAACAAGGG CATAAACTCCACCATCCTCCCCCGCCTCGCCGCACTTCCGTTTCTCCTTC CATCTTCCCTATCCCCCCTGTCTCCCAAGGACCTGGCCTCCTTGGTCCGC CCCTACCCCGCCCTTTTCACCCTCCCCCTCCCCTCCCTCTCCACCCGCCT CGCCTCCCTCTCCCTTCTCCTCCCCCCCTCTCTACTCCTCCCCACCCTTT GCCAGCATCCTCGCGCTTGGACTGCCGACCTGTCGGAGGTCATTGCTCCC CAGCTCCACCTCCTCCTCGCCTCACTGGGCCCCACCACCACATCGTCCAT CCTCCACCACCTCCCCTCCATCCTCTACCACCCACCCTCAGCGCTCACGC AGAAACTCGACCTCCTCTCCTCCCTCTTAGGGGGTTCTGTAGGTGGCGTG AACTTGCTGCTGTCCAAGAATCCCATGATCCTCGCAATGGATGTGACGGC CAACGTGGCGCCCAAGTTGCGATTCGTCCGCTCGCTCTTCCCGGACCTGG AGGAGGATGACTTCGTGGCCCTCCTCGGGACGGAGGCAGGGAGTCAATGC CTGACCGCGGCCTTTGGGAGGCTGGGACGACTTTCATATTTAACGCAAGT TCGGCCGGGATTAAGCTTGGAGGAGGGCATGAAGCTGGTGGTGTGCCCGA GTGAGGAGCTGCGGCGGCTCTACCCGGGCTACGAGAATTTTTTAGAAGAT CGGATCGAACCCCGTTTCCCCACATACACATGGGAGCAGTTGTGTGCGTT GCCGTTTGCCTTGCGGGAGCAGGCGCACGGGGAATTGCTGCATGGTGCGT ATTCAAAAAACGGCGGAAGTAGGTGA back to top
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