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Properties
| Property Name | Value |
|---|
| TranscriptId | 587297 |
| Track | FilteredModels2 |
| ProteinId | 587211 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:214093..215114 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4619 ID=mRNA_4619|Name=jgi.p|Nanoce1779_2|587211|organism=Nannochloropsis oceanica|type=mRNA|length=724bp
ACAGACCACCCAGTCCTCACTCAATTAAGCAACATGTCTGTCGAACTCCC
CCCTCTGCCGTGGGAGAGGAGCGCCTTGGCGCCTCACATCTCGGAGGAGA
CGATTGACTACCACTATGGGAAGCATCACGCTGCCTATGTGACGAAATTG
AATGGCATGATCAAGGATGACCCCACCTACGCGGGCAAGTCCGTGGAGGA
GATCATGCTAGCTGCTCCCGCCGGTGGTCTCTTTAACAACGCCGCGCAGA
CCTGGAACCACACGTTTTATTGGAACAGCATGGCGCCCAATGCTGGGGGA
CCCCCCACGGGCCCAATCGCGGATGCGATCAACTCCTCGTTTGGCTCTTT
TGACGAGTTTAAGAAGCAATTCTCGGCCGCGGCCGCCGGTCACTTCGGCA
GTGGGTGGGCGTGGCTAGTCAAGAAGGACGGAAAGCTGGCCGTGGTGTCC
ACGCACGACGCGGGAAATCCCTTGAAGGAAGGGTTGGGCACGCCTATCAT
GACGTGTGATGTGTGGGAGCATGCTTACTATGTGGATTATCGTAATGCTC
GACCGGCTTATATCGAGGCGTGGTGGTCCCTGGTGAACTGGGAGTGGGCC
AACGCCCGCTTGGCGGAGGCCTAGAAGGGAGTAGAGGGAAGGAAGGAAGG
AAGGAGGGAGGGGAAGAGGGAGGGGAAGAGGGAGGGGGTGGGATGTGCTC
TCTTTTTTGGTGTGATAGGGAAAG back to topprotein sequence of jgi.p|Nanoce1779_2|587211 >mRNA_4619-protein ID=mRNA_4619-protein|Name=jgi.p|Nanoce1779_2|587211|organism=Nannochloropsis oceanica|type=polypeptide|length=197bp
MSVELPPLPWERSALAPHISEETIDYHYGKHHAAYVTKLNGMIKDDPTYA
GKSVEEIMLAAPAGGLFNNAAQTWNHTFYWNSMAPNAGGPPTGPIADAIN
SSFGSFDEFKKQFSAAAAGHFGSGWAWLVKKDGKLAVVSTHDAGNPLKEG
LGTPIMTCDVWEHAYYVDYRNARPAYIEAWWSLVNWEWANARLAEA* back to topmRNA from alignment at scaffold_9:214093..215114- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4619 ID=mRNA_4619|Name=jgi.p|Nanoce1779_2|587211|organism=Nannochloropsis oceanica|type=mRNA|length=1022bp|location=Sequence derived from alignment at scaffold_9:214093..215114- (Nannochloropsis oceanica)
ACAGACCACCCAGTCCTCACTCAATTAAGCAACATGTCTGTCGAACTCCC
CCCTCTGCCGTGGGAGAGGAGCGCCTTGGCGCCTCACATCTCGGAGGAGA
CGATTGACTACCACTATGGGAAGCATCACGCTGCCTATGTGACGAAATTG
AATGGCATGATCAAGGTACGTTCCCTTTTTCTCTGCCCTCTCTTAGTCGT
GGGACAGACAAGACGAGCATATATGCATGCATGACTGCAGGCTTAAGGTG
GCGCAACATCGTTGCAGGTAGTTCTATCAAGGATTGGCTATCCTGTTTCC
TCCCTTTCCCGTCGTTATCCCTCCCTCTCCGTTCTCTCTCCCGTCCTCCA
TTCCGAATATATAGGATGACCCCACCTACGCGGGCAAGTCCGTGGAGGAG
ATCATGCTAGCTGCTCCCGCCGGTGGTCTCTTTAACAACGCCGCGCAGGT
ATGTCATTGCCTCTTCCTTTGCTCCCTTATCTCCCATCCAACCACCTGGT
CCTCCCTCCGTCCATCGTTTTCCCCCTCCCTCCCCTCCTCCCCTTAGACC
TGGAACCACACGTTTTATTGGAACAGCATGGCGCCCAATGCTGGGGGACC
CCCCACGGGCCCAATCGCGGATGCGATCAACTCCTCGTTTGGCTCTTTTG
ACGAGTTTAAGAAGCAATTCTCGGCCGCGGCCGCCGGTCACTTCGGCAGT
GGGTGGGCGTGGCTAGTCAAGAAGGACGGAAAGCTGGCCGTGGTGTCCAC
GCACGACGCGGGAAATCCCTTGAAGGAAGGGTTGGGCACGCCTATCATGA
CGTGTGATGTGTGGGAGCATGCTTACTATGTGGATTATCGTAATGCTCGA
CCGGCTTATATCGAGGCGTGGTGGTCCCTGGTGAACTGGGAGTGGGCCAA
CGCCCGCTTGGCGGAGGCCTAGAAGGGAGTAGAGGGAAGGAAGGAAGGAA
GGAGGGAGGGGAAGAGGGAGGGGAAGAGGGAGGGGGTGGGATGTGCTCTC
TTTTTTGGTGTGATAGGGAAAG back to topCoding sequence (CDS) from alignment at scaffold_9:214093..215114- >mRNA_4619 ID=mRNA_4619|Name=jgi.p|Nanoce1779_2|587211|organism=Nannochloropsis oceanica|type=CDS|length=1773bp|location=Sequence derived from alignment at scaffold_9:214093..215114- (Nannochloropsis oceanica)
ACCTGGAACCACACGTTTTATTGGAACAGCATGGCGCCCAATGCTGGGGG
ACCCCCCACGGGCCCAATCGCGGATGCGATCAACTCCTCGTTTGGCTCTT
TTGACGAGTTTAAGAAGCAATTCTCGGCCGCGGCCGCCGGTCACTTCGGC
AGTGGGTGGGCGTGGCTAGTCAAGAAGGACGGAAAGCTGGCCGTGGTGTC
CACGCACGACGCGGGAAATCCCTTGAAGGAAGGGTTGGGCACGCCTATCA
TGACGTGTGATGTGTGGGAGCATGCTTACTATGTGGATTATCGTAATGCT
CGACCGGCTTATATCGAGGCGTGGTGGTCCCTGGTGAACTGGGAGTGGGC
CAACGCCCGCTTGGCGGAGGCCTAGGATGACCCCACCTACGCGGGCAAGT
CCGTGGAGGAGATCATGCTAGCTGCTCCCGCCGGTGGTCTCTTTAACAAC
GCCGCGCAGATGTCTGTCGAACTCCCCCCTCTGCCGTGGGAGAGGAGCGC
CTTGGCGCCTCACATCTCGGAGGAGACGATTGACTACCACTATGGGAAGC
ATCACGCTGCCTATGTGACGAAATTGAATGGCATGATCAAGACCTGGAAC
CACACGTTTTATTGGAACAGCATGGCGCCCAATGCTGGGGGACCCCCCAC
GGGCCCAATCGCGGATGCGATCAACTCCTCGTTTGGCTCTTTTGACGAGT
TTAAGAAGCAATTCTCGGCCGCGGCCGCCGGTCACTTCGGCAGTGGGTGG
GCGTGGCTAGTCAAGAAGGACGGAAAGCTGGCCGTGGTGTCCACGCACGA
CGCGGGAAATCCCTTGAAGGAAGGGTTGGGCACGCCTATCATGACGTGTG
ATGTGTGGGAGCATGCTTACTATGTGGATTATCGTAATGCTCGACCGGCT
TATATCGAGGCGTGGTGGTCCCTGGTGAACTGGGAGTGGGCCAACGCCCG
CTTGGCGGAGGCCTAGGATGACCCCACCTACGCGGGCAAGTCCGTGGAGG
AGATCATGCTAGCTGCTCCCGCCGGTGGTCTCTTTAACAACGCCGCGCAG
ATGTCTGTCGAACTCCCCCCTCTGCCGTGGGAGAGGAGCGCCTTGGCGCC
TCACATCTCGGAGGAGACGATTGACTACCACTATGGGAAGCATCACGCTG
CCTATGTGACGAAATTGAATGGCATGATCAAGACCTGGAACCACACGTTT
TATTGGAACAGCATGGCGCCCAATGCTGGGGGACCCCCCACGGGCCCAAT
CGCGGATGCGATCAACTCCTCGTTTGGCTCTTTTGACGAGTTTAAGAAGC
AATTCTCGGCCGCGGCCGCCGGTCACTTCGGCAGTGGGTGGGCGTGGCTA
GTCAAGAAGGACGGAAAGCTGGCCGTGGTGTCCACGCACGACGCGGGAAA
TCCCTTGAAGGAAGGGTTGGGCACGCCTATCATGACGTGTGATGTGTGGG
AGCATGCTTACTATGTGGATTATCGTAATGCTCGACCGGCTTATATCGAG
GCGTGGTGGTCCCTGGTGAACTGGGAGTGGGCCAACGCCCGCTTGGCGGA
GGCCTAGGATGACCCCACCTACGCGGGCAAGTCCGTGGAGGAGATCATGC
TAGCTGCTCCCGCCGGTGGTCTCTTTAACAACGCCGCGCAGATGTCTGTC
GAACTCCCCCCTCTGCCGTGGGAGAGGAGCGCCTTGGCGCCTCACATCTC
GGAGGAGACGATTGACTACCACTATGGGAAGCATCACGCTGCCTATGTGA
CGAAATTGAATGGCATGATCAAG back to top
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