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Properties
| Property Name | Value |
|---|
| TranscriptId | 437236 |
| Track | FilteredModels2 |
| ProteinId | 437150 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:175351..176949 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4608 ID=mRNA_4608|Name=jgi.p|Nanoce1779_2|437150|organism=Nannochloropsis oceanica|type=mRNA|length=1162bp
CTGCAGTGCGACCAAGACGAGAAGAAGTGCAAGGTGGGGAGGTTGGCACG
CGCCCCTGTCAGCCTCTCCTTCTACCCACCGCCGAGACAGGAGGAGGAGG
AGGAGGAGAATAAGGAGGAGGAGGACGGGAAGGAGGGAGGAGGGAGGGAA
GGAGAAAGAGATAGAGGAGGGGAAGGGTTTCGGCACAGGGAGCTACGGTC
AAGCGTGCGAGGAATTTACGGAGGAGGAGAAGAAGGGCATGGAAGGTAAT
GTGGTGGTGGTAGAGAGGGGGGGGTGTAGCTTTGTGTCCAAGGTGAGGCG
TGTGCAGGCGGCAGGGGGGGTGGGGGTGGTAGTGTTGGATTTGCGCTCTG
TTCCTCCCTCCTCGTCTTTTCCCTCGTCCTCGTCCCCGTCCATGTCGACG
GAGGGGAAGAAGGAGGAGGAGGGGGGAGAAGGAGGAGGAGGGGGAGGAGG
GGGAGGAGGAGGGACAGAAACAGACTCCATCTTTTCGACGTGGCAAGTGA
TGCACGACGATCAGACAGGGAGCGATATTGTGATTCCTTCCACCCTACTA
GGAGGAGAGGGAGCGTGGAGCATCTTACAGACGGGGTATCTCCCCATCTC
TCCCTCCCTCCTTCCCTTCTTGCCCGAGGTGCAGGGGGGGGGAGGGAGGG
AAGGAGGGAAGGTGTTGGTGAGGATGGGAGCGGAAGACATGCTAGCTCTG
GAAGAGGAGACAGAGCTCTTGGACTTGACTGCATTGATAGGCCCCGCACT
GGAGGGGAGGGAGGGTGGGAGGGAAGGAGGAGGAGGAGGGAAGAAGGCGA
ATGACTTATTGGCAAGTCTGATGAAGGGGATGAAGGATATTTTGTTGCCA
CGTCAGCAGAGGGGCAGGGGGTTGCCTTTGAAGGGAGGAGGAGGGAGGGA
AGAGGAGGAAGAGGAGGAGGAGGTGGAGGAGGATTATGATGATGATGATG
ATGATGATGATGATGATGAGGATGATGAGGAGGAGGAGGAGGAGGAGGAA
TGGTTGGAAGCTCTTGAGGAGGAGGATATGGAGGCGGAGGAGGAGGAGGA
GGAGGAGGATGATGAGGAGGAGTGGTCGGAAGCACACGATGAGTAGGAGA
CGAGGAAGCTGCTTCAGGCGACCGCTGACGGTTATGATACTTGAGAAAGA
GAAGAGAGAGAG back to topprotein sequence of jgi.p|Nanoce1779_2|437150 >mRNA_4608-protein ID=mRNA_4608-protein|Name=jgi.p|Nanoce1779_2|437150|organism=Nannochloropsis oceanica|type=polypeptide|length=286bp
MEGNVVVVERGGCSFVSKVRRVQAAGGVGVVVLDLRSVPPSSSFPSSSSP
SMSTEGKKEEEGGEGGGGGGGGGGGTETDSIFSTWQVMHDDQTGSDIVIP
STLLGGEGAWSILQTGYLPISPSLLPFLPEVQGGGGREGGKVLVRMGAED
MLALEEETELLDLTALIGPALEGREGGREGGGGGKKANDLLASLMKGMKD
ILLPRQQRGRGLPLKGGGGREEEEEEEEVEEDYDDDDDDDDDDEDDEEEE
EEEEWLEALEEEDMEAEEEEEEEDDEEEWSEAHDE* back to topmRNA from alignment at scaffold_9:175351..176949+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4608 ID=mRNA_4608|Name=jgi.p|Nanoce1779_2|437150|organism=Nannochloropsis oceanica|type=mRNA|length=1599bp|location=Sequence derived from alignment at scaffold_9:175351..176949+ (Nannochloropsis oceanica)
CTGCAGTGCGACCAAGACGAGAAGAAGTGCAAGGTGGGGAGGTTGGCACG
CGCCCCTGTCAGCCTCTCCTTCTACCCACCGCCGAGACAGGAGGAGGAGG
AGGAGGAGAATAAGGAGGAGGAGGACGGGAAGGAGGGAGGCAAGGAGGAA
AGGAGGGAGGAAGGGAGGAGGAGGAGGAGGAGGCCGGGACGGTTTGAAGA
GTTCTGGGCTCAGTCACGAGAAGCAGCCCTCACTTATGTAAGCATGGAGA
AAGCAAGCCCCTCCCTCCCTCTCCCTCCCTCCTTCCCTCCCTCCCTCGCG
CCCGCCCTCTCTTCCCTCAGATCAGACACTATGTCTTACTGCCCCTTTTT
CCGAGCCCCCGGTTCCCACTCCCTCAATCATCCCTCCCTCCCTCCCTCCC
TCCCTCTCTCCCCTCAGGTCGAGCACCACATCTACCCCTCCTTCCACGTC
CTGGGCTACCCGGCAAATTTTGGTCCTGAGCTTCGACACGTAGGCCCCAC
CTACGGCTTCCTCGTTCCCCTCCTCCCTCCCTCCCGCCCGCCCTCAACCC
CCACTTTATCCGCGAAGGAAGAGGAGGAGGGAGGGAAGGAGAAAGAGATA
GAGGAGGGGAAGGGTTTCGGCACAGGGAGCTACGGTCAAGCGTGCGAGGA
ATTTACGGAGGAGGAGAAGAAGGGCATGGAAGGTAATGTGGTGGTGGTAG
AGAGGGGGGGGTGTAGCTTTGTGTCCAAGGTGAGGCGTGTGCAGGCGGCA
GGGGGGGTGGGGGTGGTAGTGTTGGATTTGCGCTCTGTTCCTCCCTCCTC
GTCTTTTCCCTCGTCCTCGTCCCCGTCCATGTCGACGGAGGGGAAGAAGG
AGGAGGAGGGGGGAGAAGGAGGAGGAGGGGGAGGAGGGGGAGGAGGAGGG
ACAGAAACAGACTCCATCTTTTCGACGTGGCAAGTGATGCACGACGATCA
GACAGGGAGCGATATTGTGATTCCTTCCACCCTACTAGGAGGAGAGGGAG
CGTGGAGCATCTTACAGACGGGGTATCTCCCCATCTCTCCCTCCCTCCTT
CCCTTCTTGCCCGAGGTGCAGGGGGGGGGAGGGAGGGAAGGAGGGAAGGT
GTTGGTGAGGATGGGAGCGGAAGACATGCTAGCTCTGGAAGAGGAGACAG
AGCTCTTGGACTTGACTGCATTGATAGGCCCCGCACTGGAGGGGAGGGAG
GGTGGGAGGGAAGGAGGAGGAGGAGGGAAGAAGGCGAATGACTTATTGGC
AAGTCTGATGAAGGGGATGAAGGATATTTTGTTGCCACGTCAGCAGAGGG
GCAGGGGGTTGCCTTTGAAGGGAGGAGGAGGGAGGGAAGAGGAGGAAGAG
GAGGAGGAGGTGGAGGAGGATTATGATGATGATGATGATGATGATGATGA
TGATGAGGATGATGAGGAGGAGGAGGAGGAGGAGGAATGGTTGGAAGCTC
TTGAGGAGGAGGATATGGAGGCGGAGGAGGAGGAGGAGGAGGAGGATGAT
GAGGAGGAGTGGTCGGAAGCACACGATGAGTAGGAGACGAGGAAGCTGCT
TCAGGCGACCGCTGACGGTTATGATACTTGAGAAAGAGAAGAGAGAGAG back to topCoding sequence (CDS) from alignment at scaffold_9:175351..176949+ >mRNA_4608 ID=mRNA_4608|Name=jgi.p|Nanoce1779_2|437150|organism=Nannochloropsis oceanica|type=CDS|length=858bp|location=Sequence derived from alignment at scaffold_9:175351..176949+ (Nannochloropsis oceanica)
ATGGAAGGTAATGTGGTGGTGGTAGAGAGGGGGGGGTGTAGCTTTGTGTC
CAAGGTGAGGCGTGTGCAGGCGGCAGGGGGGGTGGGGGTGGTAGTGTTGG
ATTTGCGCTCTGTTCCTCCCTCCTCGTCTTTTCCCTCGTCCTCGTCCCCG
TCCATGTCGACGGAGGGGAAGAAGGAGGAGGAGGGGGGAGAAGGAGGAGG
AGGGGGAGGAGGGGGAGGAGGAGGGACAGAAACAGACTCCATCTTTTCGA
CGTGGCAAGTGATGCACGACGATCAGACAGGGAGCGATATTGTGATTCCT
TCCACCCTACTAGGAGGAGAGGGAGCGTGGAGCATCTTACAGACGGGGTA
TCTCCCCATCTCTCCCTCCCTCCTTCCCTTCTTGCCCGAGGTGCAGGGGG
GGGGAGGGAGGGAAGGAGGGAAGGTGTTGGTGAGGATGGGAGCGGAAGAC
ATGCTAGCTCTGGAAGAGGAGACAGAGCTCTTGGACTTGACTGCATTGAT
AGGCCCCGCACTGGAGGGGAGGGAGGGTGGGAGGGAAGGAGGAGGAGGAG
GGAAGAAGGCGAATGACTTATTGGCAAGTCTGATGAAGGGGATGAAGGAT
ATTTTGTTGCCACGTCAGCAGAGGGGCAGGGGGTTGCCTTTGAAGGGAGG
AGGAGGGAGGGAAGAGGAGGAAGAGGAGGAGGAGGTGGAGGAGGATTATG
ATGATGATGATGATGATGATGATGATGATGAGGATGATGAGGAGGAGGAG
GAGGAGGAGGAATGGTTGGAAGCTCTTGAGGAGGAGGATATGGAGGCGGA
GGAGGAGGAGGAGGAGGAGGATGATGAGGAGGAGTGGTCGGAAGCACACG
ATGAGTAG back to top
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