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Properties
| Property Name | Value |
|---|
| TranscriptId | 437092 |
| Track | FilteredModels2 |
| ProteinId | 437006 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:150201..151500 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4600 ID=mRNA_4600|Name=jgi.p|Nanoce1779_2|437006|organism=Nannochloropsis oceanica|type=mRNA|length=1202bp
CCTCCTCGCTCACCACTTAAAACGCATAGACAGTCATGCTTCTCTTCAAT
CATATCAGACCGTTTCCTTTCTGAAATGTGCGCGGCGTGATTTCGCTGTC
CGCCTTGCAGAAGGTGTATATGGAATTTAGGGCGTTCGTTGCCTTTGCTT
GCATGCCGTTCGTGACGTACCCGAAACACCCTTCTCTTTGTGCACCCACA
TCGACACACTTACATTATAATTTCGCGCATGTTACACAGATTTTAATCTG
CAGACGCCATCGTCTTTGTTCCTTCTTCCGGAACCGCCGCCATTTTACAA
CCAGCATGACATCGATCCACCAAGCCGCCGCTCGCGGTGCCGTCTCCCTA
GTCAACCATTTCCTTGAATCCTCCTGCGAGACACTTAATGCCCGTGACAC
CCAAGGACGCACTCCACTCATGCATGCTTGCCAGTGGGGGCAATACCTAG
TATGCCGTCTTTTGTTAGACCGGAATGCGCATGTTAATGCGGTTGACTTT
CATCGGCGTAATGCCTTGTACTGGACCCTAGTCACATCTGGGGCGAGTGT
GAAGATTGTGGAGTTACTGTTGGAGAGAGGGGTTGATGTAATGGGAGGGA
GGGATTGTCCTTCTTTCCTTCCTTCCTCATGTTTGGTTGGTGGGAGGAGG
CGGAGGAGGAAGAGGAGGAGTGGGTCTCGTGGACGAGAAAGAGGAGAAGA
AGGAGAAAGGGGTGAGGTGGAAGTAAAGGAGGAGGAGGAAGAGGACGAGG
AGGAGGAGGGATTTCGTGGAGGAGGGGCAGGCATGACATTTCTGATGCGC
AGGTGAGTGAAGATGAAGGTAAAGGAGGAGGTGGGGGGAACGAATAGAGG
GAGGGAGAGAGTTTAGATAGGGATCAGAGGCGGAAGTGGGATAAGAGGAG
TCATTCACAAGGCCGTCTACACCCAATCATCCTCCCTCCTTCCTCCCTCC
TTCCATCCCTCACTCCCTCCCTGTCTCTGTAGTTGCGCCCTCGGGTACGA
GCAGATTGTCCGTCTCTTTCTTCGTCATGGTGGCAGTGATGTTAACGCCC
GCGACCGTTACGGGAAAACGGCCCTGCACCATGCCTGCGAGCGAGGGAGG
GAGAAAGTTGTGGGTCTCCTACTGGAGGGGGGGAGGGAGGGAGAGAGGGA
GGGAGGGCAGCAGGTGGATGTCGAAATCAGGGATAGGGATGGAAGGACGG
CG back to topprotein sequence of jgi.p|Nanoce1779_2|437006 >mRNA_4600-protein ID=mRNA_4600-protein|Name=jgi.p|Nanoce1779_2|437006|organism=Nannochloropsis oceanica|type=polypeptide|length=229bp
MEFRAFVAFACMPFVTYPKHPSLCAPTSTHLHYNFAHVTQILICRRHRLC
SFFRNRRHFTTSMTSIHQAAARGAVSLVNHFLESSCETLNARDTQGRTPL
MHACQWGQYLVCRLLLDRNAHVNAVDFHRRNALYWTLVTSGASVKIVELL
LERGVDVMGGRDCPSFLPSSCLVGGRRRRRKRRSGSRGRERGEEGERGEV
EVKEEEEEDEEEEGFRGGGAGMTFLMRR* back to topmRNA from alignment at scaffold_9:150201..151500- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4600 ID=mRNA_4600|Name=jgi.p|Nanoce1779_2|437006|organism=Nannochloropsis oceanica|type=mRNA|length=1300bp|location=Sequence derived from alignment at scaffold_9:150201..151500- (Nannochloropsis oceanica)
CCTCCTCGCTCACCACTTAAAACGCATAGACAGTCATGCTTCTCTTCAAT
CATATCAGACCGTTTCCTTTCTGAAATGTGCGCGGCGTGATTTCGCTGTC
CGCCTTGCAGAAGGTGTATATGGAATTTAGGGCGTTCGTTGCCTTTGCTT
GCATGCCGTTCGTGACGTACCCGAAACACCCTTCTCTTTGTGCACCCACA
TCGACACACTTACATTATAATTTCGCGCATGTTACACAGATTTTAATCTG
CAGACGCCATCGTCTTTGTTCCTTCTTCCGGAACCGCCGCCATTTTACAA
CCAGCATGACATCGATCCACCAAGCCGCCGCTCGGTAAGCCCGCCTCTTT
CCCTTCCTATCCCCCGCCTTCCTTTAATCGTCAGTTCCCAGCCAATTTGA
CCATCGATCTTCCATCTTTCATTCCTTCTTAGCGGTGCCGTCTCCCTAGT
CAACCATTTCCTTGAATCCTCCTGCGAGACACTTAATGCCCGTGACACCC
AAGGACGCACTCCACTCATGCATGCTTGCCAGTGGGGGCAATACCTAGTA
TGCCGTCTTTTGTTAGACCGGAATGCGCATGTTAATGCGGTTGACTTTCA
TCGGCGTAATGCCTTGTACTGGACCCTAGTCACATCTGGGGCGAGTGTGA
AGATTGTGGAGTTACTGTTGGAGAGAGGGGTTGATGTAATGGGAGGGAGG
GATTGTCCTTCTTTCCTTCCTTCCTCATGTTTGGTTGGTGGGAGGAGGCG
GAGGAGGAAGAGGAGGAGTGGGTCTCGTGGACGAGAAAGAGGAGAAGAAG
GAGAAAGGGGTGAGGTGGAAGTAAAGGAGGAGGAGGAAGAGGACGAGGAG
GAGGAGGGATTTCGTGGAGGAGGGGCAGGCATGACATTTCTGATGCGCAG
GTGAGTGAAGATGAAGGTAAAGGAGGAGGTGGGGGGAACGAATAGAGGGA
GGGAGAGAGTTTAGATAGGGATCAGAGGCGGAAGTGGGATAAGAGGAGTC
ATTCACAAGGCCGTCTACACCCAATCATCCTCCCTCCTTCCTCCCTCCTT
CCATCCCTCACTCCCTCCCTGTCTCTGTAGTTGCGCCCTCGGGTACGAGC
AGATTGTCCGTCTCTTTCTTCGTCATGGTGGCAGTGATGTTAACGCCCGC
GACCGTTACGGGAAAACGGCCCTGCACCATGCCTGCGAGCGAGGGAGGGA
GAAAGTTGTGGGTCTCCTACTGGAGGGGGGGAGGGAGGGAGAGAGGGAGG
GAGGGCAGCAGGTGGATGTCGAAATCAGGGATAGGGATGGAAGGACGGCG
back to topCoding sequence (CDS) from alignment at scaffold_9:150201..151500- >mRNA_4600 ID=mRNA_4600|Name=jgi.p|Nanoce1779_2|437006|organism=Nannochloropsis oceanica|type=CDS|length=1374bp|location=Sequence derived from alignment at scaffold_9:150201..151500- (Nannochloropsis oceanica)
CGGTGCCGTCTCCCTAGTCAACCATTTCCTTGAATCCTCCTGCGAGACAC
TTAATGCCCGTGACACCCAAGGACGCACTCCACTCATGCATGCTTGCCAG
TGGGGGCAATACCTAGTATGCCGTCTTTTGTTAGACCGGAATGCGCATGT
TAATGCGGTTGACTTTCATCGGCGTAATGCCTTGTACTGGACCCTAGTCA
CATCTGGGGCGAGTGTGAAGATTGTGGAGTTACTGTTGGAGAGAGGGGTT
GATGTAATGGGAGGGAGGGATTGTCCTTCTTTCCTTCCTTCCTCATGTTT
GGTTGGTGGGAGGAGGCGGAGGAGGAAGAGGAGGAGTGGGTCTCGTGGAC
GAGAAAGAGGAGAAGAAGGAGAAAGGGGTGAGGTGGAAGTAAAGGAGGAG
GAGGAAGAGGACGAGGAGGAGGAGGGATTTCGTGGAGGAGGGGCAGGCAT
GACATTTCTGATGCGCAGGTGAATGGAATTTAGGGCGTTCGTTGCCTTTG
CTTGCATGCCGTTCGTGACGTACCCGAAACACCCTTCTCTTTGTGCACCC
ACATCGACACACTTACATTATAATTTCGCGCATGTTACACAGATTTTAAT
CTGCAGACGCCATCGTCTTTGTTCCTTCTTCCGGAACCGCCGCCATTTTA
CAACCAGCATGACATCGATCCACCAAGCCGCCGCTCGCGGTGCCGTCTCC
CTAGTCAACCATTTCCTTGAATCCTCCTGCGAGACACTTAATGCCCGTGA
CACCCAAGGACGCACTCCACTCATGCATGCTTGCCAGTGGGGGCAATACC
TAGTATGCCGTCTTTTGTTAGACCGGAATGCGCATGTTAATGCGGTTGAC
TTTCATCGGCGTAATGCCTTGTACTGGACCCTAGTCACATCTGGGGCGAG
TGTGAAGATTGTGGAGTTACTGTTGGAGAGAGGGGTTGATGTAATGGGAG
GGAGGGATTGTCCTTCTTTCCTTCCTTCCTCATGTTTGGTTGGTGGGAGG
AGGCGGAGGAGGAAGAGGAGGAGTGGGTCTCGTGGACGAGAAAGAGGAGA
AGAAGGAGAAAGGGGTGAGGTGGAAGTAAAGGAGGAGGAGGAAGAGGACG
AGGAGGAGGAGGGATTTCGTGGAGGAGGGGCAGGCATGACATTTCTGATG
CGCAGGTGAATGGAATTTAGGGCGTTCGTTGCCTTTGCTTGCATGCCGTT
CGTGACGTACCCGAAACACCCTTCTCTTTGTGCACCCACATCGACACACT
TACATTATAATTTCGCGCATGTTACACAGATTTTAATCTGCAGACGCCAT
CGTCTTTGTTCCTTCTTCCGGAACCGCCGCCATTTTACAACCAGCATGAC
ATCGATCCACCAAGCCGCCGCTCG back to top
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