jgi.p|Nanoce1779_2|587091, mRNA_4590 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|587091
Unique Name	mRNA_4590
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4893
Alignment location	scaffold_9:116435..121425 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	587177
Track	FilteredModels2
ProteinId	587091

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_9	supercontig	scaffold_9:116435..121425 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|587091	gene_4590	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|587091	mRNA_4590-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_4590	CDS_4590	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_9:116435..121425-
coding sequence from alignment at scaffold_9:116435..121425-

mRNA sequence

>mRNA_4590 ID=mRNA_4590|Name=jgi.p|Nanoce1779_2|587091|organism=Nannochloropsis oceanica|type=mRNA|length=4893bp
ACAGACTGGATAGAAAGAGGACTCGAGCATGTCTACCATGGGAGCTTCAT
TTGCATTGAGGCGCTGTGCCTCGTCGTTGTATTTGTTGCGTCCGCATCGC
GGTGCCCACCTTTTCCTTCTTTTACCCAACTCGTCCTTTACACGCTTCTA
CTGGCCGGAACCACTGCGGCAGCCGATTCTTCGTGCGCCTTCAGCTTGAC
AGGACAGGTCAGGCAGCCGTACGTGCTGCCAGACAAGCGGTCGACAGTCC
GCATCGAGGCCATGAACCCATCGTCCAGTACGACAGTAGTTGCAGTCCAA
CTGCGATTGCCCCAAAACACGACGTACAAGACCGGAAAAGCCAAGTCATG
GAGGCCTCGTCTGGCTCGCATAGACGGCAGTAGGCGTCCTGTCTATGACC
CGGAAACGCACACGGTGGCGTGGGCCAATATCACGCTGCGGCCGCGGGGT
GTCATCAAGTTGTCGGCCAAGGTTCGGCTTGAGCCTTGTTATCCGGGCCC
GCATCTCAACTTCTCATATGTGGCATTTGCCACGGATGAAGCCGGCAATA
CAATATGTTCGCAGGATGGCGTGGCGAGCGTGGCTGTCAAGGACAAGAAG
ATGCACTTCGGTCGAGCCATCCCTGACTGCGGTCTCATTTCAGAAGCATG
TATATCTGGCCAATTTCGGCCGCCAGCGGGCGGGCCGTGCCAGTTCTGCA
CACCTGGAACCTACTGAAACCTGTCCTTTGAGGCCATTGCCTGCCTCAAC
TGCCCTTCCGATCAGACATCCCTGCAGGGGGCAGCGCAATGCTTCACGCC
ATGCGCGTCCGGAACGGCCCTCAACACCACGGACTTTAGCTGTGTCCCAA
TCCCAGCGAGCGTGTTCGATGATGCTGCGGCCAACAACATCACTATCGAC
GTCAACACCACGGAAGTTTTTGTGGTCAATGATCCTGGGAGTCTAGAGGA
CTCGATCGGCGCAGCTGCCCTGATGAACGGAACGGTGCTCATCGTCCTGG
CACCTAACCTCTACCCCCAGGTGAACAGTTACGTCCTTACAGCGAACCTC
GTGGTCCTAGCGGGTAGCCCACTGCAGGGCGGTAGACGGCGACGTCCGCA
TGCTAGTCATCGGGAGCTGCAGGGTACGGATGATGAGACCGTCATTTATG
CGACGGGGAGTAATCGGCATTTTGTGATGTCGAACGCAGACATCTGGCTT
AATGGTATCACTCTTCAAGGCGCCTCAACTGGTCCCACATCTGGAGGCGT
GGAACTTCAGAACGGGGCCAAGGGGCTGTTTGTTAGCACGAAGTTCCGCG
CCTGTCGCAGCACGGGGGAAGGTGGCAGTTTTAGGCTCATCGGAGGGTCC
TCTTGCTCCGTGGGCACGGGGTGTGTTTGTCAGCAATGCTGGTGCCCAGG
GTGGGGCCATCTACGCCGGGGCAGGCTGCTCGGTGACCGTCAATAACACG
GTTTCATTTACAAACAACTCCGCGCCGCGCACATCGTCTTCGGCGAGTGG
GGGTGGTGCCATCTACCTGGCCAGCACTGCTTCGCTTCTGCTGGACTATG
ACGTCGCGTTTACTGGAAACGTAAATGATGATGTGACCATCACGGGCGGC
TCGGTGTCATGTCTAAACTCGCTGTACTCTACAGGCCTGGTGAATTGCAC
AAGTGGCTGCACGGGCTCCTACAAAATTCCCGCTAGCTGCCCCGTCTGTT
CGATGAGCAGTGGTAGCACCTGCACGAGCTGTCCCCAGAGGAGCTTCGGG
GGAAGCAGTGCAGCGCTGGTGTGCCAGCACTGCCCGTACGGCTACACAAC
CATCTACCCACCCTCGAGCGTATCGCCATTTGACTGTATCCTAATTACAG
ATTCACCCACGCTCTCACCAACATCCCCGGGGGATACCGTCTCCCCCACA
TCGAGCCCTACAATAGCGGCGCCCACGGTGGCACCCACGAAGGCGCCCAC
CCCCTCCCCGACGACCGAACAGCCGACGGTAAGTCCAACTCCTGTGGGGT
ACAAGGCGCCGGCGATGGCCCACTATTACCACGACAGTTGTATCGCGACG
CCCACCGTACCTGCACCTCCTAGCTTCGCGGACGGCGCTTTGCTAACGGC
CGGGAGCGGCGGCACATATGCACTGCTCTCTCAGGCAATTGATGCAGCCT
CTGCGGGGGACCGCATCCAGATCCTCCCGGGTATTATCGAAGAAACAGCC
ACCGTGACCGTGAGCAAGAGCCTAGAAATCTTCGGGACGGGTCCCGACTG
CATCGTGCAGCGGGATAGCACGACGGCTGTCATCACAATCGCCGCGGGGA
CCAACGACGTCTACATTCACACCCTCGGTGTGATCAACAACCAGGTCCCT
AGTACAGACCCGGGTGGCCTTTCCTCCTGCATCACGGCCGCCACTATGCA
AACGGCCACTCCAAGTGGCGCCACTGGCATCTATATTGCCAACTCCACCT
TCACCTTCCCAAAGATGGGCGTGAGCATTGATGCGTCAGACTGGGTGGTA
CGGGATTGTGTCTTCACGCCTAACGCCAACGCGCCGGGCACTACTCTCCG
CGCCCTGGCTCCCTATGGTAGCACGGGCCAGTCTTTTGCCACGGGCAACA
CCTTCAACAACCCTAGTGAGTCCTCCCGACTTATCGCTGTTTTTATGACC
GCTGCAGGACCTCGGGGGGCGTCCTTCACTACGGGGTGGAAGGGCAATTT
CACACTGGCCAACAACGTCATAAGCACCTCTGGGGGAGCCCCGCGTGCTT
ACATTGACACGACTGGCATGTACCGTCAGCCGGGCGATCAAAGTGATCTT
GGTAGCAACGGTGAGTTCTCCATGTACTGCAGGGGAATGACTTCCAGGTG
AACTACACGTCGTCCCCTGCGCTCTTCTACGTGGGCTACGCCCAGGCGCA
GGCCTTCGGTTTCTTTGACGTACTTCTTGTTAAGGATAATGTCTTTGGGG
CGCGTACCAGTGGCTCCCAAAAGGGTGCTTTGTATTTCACTTCATCACAG
GCGGGAATCTTGGGCTCCTTTGCGGGAGGCTATTACGCCGGGGGCAACTC
TTTTTCCACATCCAATGTTGAACTCGATTCTAACTATGTGGACGCATCTT
TTACACCCAATTTGTTGGTGATAAATACCAACACATTCACGGCTCCCTCT
CCGCTCATCACGTCCATCTATCCGGCGGCTGCAACTGGTCTTCTCAAGGT
AGACAGCATACAACTCGTGGCGGGTGATCGTGTCTTTGCTGTGGATAATT
GCGATGCTGTAAAGAACGGTCTTTATACCTCGGAGGCTGGGGCATGGCCC
CGCACGACCGATTTCGCTGTGGGTATGGACGTCTATGCCTCTTTCTTTCA
GGTCATGAACGGGACGGAGTTCGGCGGAACTAGTTGGAACTGCACCAACG
AGGCCGGCTCCGCCGTGGTGGGCACCGACGCACTGTTCTTCAGTCAAGCG
TAGATTCGTTGTTTCCCAAGCTGCCAGGCTGTCAGTCTGCGTTACAAGTA
AATCTATGTGAAAGTAGAACAACGATTATTATGGAATGGAGGGGTAGACG
AGAGATCAGTAGAAGGGAGGAAAAAGGGAGGAAAAACAGAGCGAAATTGG
GGGAAATCAAAGTATATATTGATGAAAGTGGGAGGATTCTGAGTTGTTAT
GTGTGTGTGATGGACTGACTGGTAAGGAGGAAGTTTTCTATTCATGACCA
AGGCCTGCAGCATGATACTGGGCAGGTCGCGAACGTACGATTTCCTACCT
CCGGCGCCATCGACAGGACCGCCAGAGGAGTCACCTGTCGGCAGCAATCG
CCAGTTCTTGTCATGCCGCACCCAGAGAAGCAATTGAAGGTAATTTTGTC
GTGTTGAGTATTAACAATAATAATAATTAGTACTACTATCAACTTTTACT
ATTACTTATTATTATTATTGGTGTGTCGCACGTCCTCGGGATTGAAAAGT
GGAAAATAAAGAAACGAGTGGGACAGCGTTCCCGATCCAAAATCGCTAAA
TTATTTCCGGCAAAGTCCTGATATCATATTGACTAGATGAATCGTAAGGA
CCTTAGGCTTAAGAACAAGCGCTGGCATGCACAGAAGGTGGATAAGCATC
CTAATTTGACTAGTTTTACGTATCCCTCCTCCTAATCTAAAGCTGAAGGC
AATACAGGGAAACATCACAACCAGCAAGAATAAAGAGAAAGCACCCTTAT
TTCAACGATAGCCGTCACTTGAATCAGGCTGATAAGTCATCGATTGTGAA
CATAATCATTGAATGTCAACAATTGCCATCACGATGAGAAGTCATTGAAT
TGAAACCTAAGGCAGGACTTTGATCATCAATTTATTTTCTTAAAGACTTC
TTTAAGATTGCCCATTGTCTCATTCTCCTCTGAATTCCCCCCTTTCTAAT
CGCATATGAGAGAGGACGAAGACAATGACAGAGCCTGACGAGGAGAACCC
TCCTGCAACACCTCTATCCACTCATTATTACCGTTGTAACAGTACTTTTT
TTACATAACCTTACTCTTTCCTCGTGTTTTACAAAAATGCTGTGTTTTCT
CCCTGCCCCCTTTTCTCTCTCACTCTCCTTTTCTCTCTCATTTTCTCTCT
CGCTCGATGTTTGTTGCTCTCTCATTTAGTGTATGGAGGTTTTGAGATGC
TGCTACTGTATATAGGTCTGTACACTCTGATATTATCAAGGGAAGCGAAG
CGGAAGGGAACGGAGAGAGGGAACGAGGGAGGGAAGGAGAGAAGGCTGGC
TAAAAATGAGGGCGAAAGATCCCGGGCCGACAAGAAGCACGAAGCAACGC
TTCTCCTGCTCCTGCTCCTGCTGCTGCCGCTGCTGCTCCCCACATCAAAT
GGGCCTTGGGTGCCGATCGAGGCCGGCCTCTCTTCTTAGGCGG

protein sequence of jgi.p|Nanoce1779_2|587091

>mRNA_4590-protein ID=mRNA_4590-protein|Name=jgi.p|Nanoce1779_2|587091|organism=Nannochloropsis oceanica|type=polypeptide|length=550bp
MVSLFKAPQLVPHLEAWNFRTGPRGCLLARSSAPVAARGKVAVLGSSEGP
LAPWARGVFVSNAGAQGGAIYAGAGCSVTVNNTVSFTNNSAPRTSSSASG
GGAIYLASTASLLLDYDVAFTGNVNDDVTITGGSVSCLNSLYSTGLVNCT
SGCTGSYKIPASCPVCSMSSGSTCTSCPQRSFGGSSAALVCQHCPYGYTT
IYPPSSVSPFDCILITDSPTLSPTSPGDTVSPTSSPTIAAPTVAPTKAPT
PSPTTEQPTVSPTPVGYKAPAMAHYYHDSCIATPTVPAPPSFADGALLTA
GSGGTYALLSQAIDAASAGDRIQILPGIIEETATVTVSKSLEIFGTGPDC
IVQRDSTTAVITIAAGTNDVYIHTLGVINNQVPSTDPGGLSSCITAATMQ
TATPSGATGIYIANSTFTFPKMGVSIDASDWVVRDCVFTPNANAPGTTLR
ALAPYGSTGQSFATGNTFNNPSESSRLIAVFMTAAGPRGASFTTGWKGNF
TLANNVISTSGGAPRAYIDTTGMYRQPGDQSDLGSNGEFSMYCRGMTSR*

mRNA from alignment at scaffold_9:116435..121425-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4590 ID=mRNA_4590|Name=jgi.p|Nanoce1779_2|587091|organism=Nannochloropsis oceanica|type=mRNA|length=4991bp|location=Sequence derived from alignment at scaffold_9:116435..121425- (Nannochloropsis oceanica)
ACAGACTGGATAGAAAGAGGACTCGAGCATGTCTACCATGGGAGCTTCAT
TTGCATTGAGGCGCTGTGCCTCGTCGTTGTATTTGTTGCGTCCGCATCGC
GGTGCCCACCTTTTCCTTCTTTTACCCAACTCGTCCTTTACACGCTTCTA
CTGGCCGGAACCACTGCGGCAGCCGATTCTTCGTGCGCCTTCAGCTTGAC
AGGACAGGTCAGGCAGCCGTACGTGCTGCCAGACAAGCGGTCGACAGTCC
GCATCGAGGCCATGAACCCATCGTCCAGTACGACAGTAGTTGCAGTCCAA
CTGCGATTGCCCCAAAACACGACGTACAAGACCGGAAAAGCCAAGTCATG
GAGGCCTCGTCTGGCTCGCATAGACGGCAGTAGGCGTCCTGTCTATGACC
CGGAAACGCACACGGTGGCGTGGGCCAATATCACGCTGCGGCCGCGGGGT
GTCATCAAGTTGTCGGCCAAGGTTCGGCTTGAGCCTTGTTATCCGGGCCC
GCATCTCAACTTCTCATATGTGGCATTTGCCACGGATGAAGCCGGCAATA
CAATATGTTCGCAGGATGGCGTGGCGAGCGTGGCTGTCAAGGACAAGAAG
ATGCACTTCGGTCGAGCCATCCCTGACTGCGGTCTCATTTCAGAAGCATG
TATATCTGGCCAATTTCGGCCGCCAGCGGGCGGGCCGTGCCAGTTCTGCA
CACCTGGAACCTACTGAAACCTGTCCTTTGAGGCCATTGCCTGCCTCAAC
TGCCCTTCCGATCAGACATCCCTGCAGGGGGCAGCGCAATGCTTCACGCC
ATGCGCGTCCGGAACGGCCCTCAACACCACGGACTTTAGCTGTGTCCCAA
TCCCAGCGAGCGTGTTCGATGATGCTGCGGCCAACAACATCACTATCGAC
GTCAACACCACGGAAGTTTTTGTGGTCAATGATCCTGGGAGTCTAGAGGA
CTCGATCGGCGCAGCTGCCCTGATGAACGGAACGGTGCTCATCGTCCTGG
CACCTAACCTCTACCCCCAGGTGAACAGTTACGTCCTTACAGCGAACCTC
GTGGTCCTAGCGGGTAGCCCACTGCAGGGCGGTAGACGGCGACGTCCGCA
TGCTAGTCATCGGGAGCTGCAGGGTACGGATGATGAGACCGTCATTTATG
CGACGGGGAGTAATCGGCATTTTGTGATGTCGAACGCAGACATCTGGCTT
AATGGTATCACTCTTCAAGGCGCCTCAACTGGTCCCACATCTGGAGGCGT
GGAACTTCAGAACGGGGCCAAGGGGCTGTTTGTTAGCACGAAGTTCCGCG
CCTGTCGCAGCACGGGGGAAGGTGGCAGTTTTAGGCTCATCGGAGGGTCC
TCTTGCTCCGTGGGCACGGGGTGTGTTTGTCAGCAATGCTGGTGCCCAGG
GTGGGGCCATCTACGCCGGGGCAGGCTGCTCGGTGACCGTCAATAACACG
GTTTCATTTACAAACAACTCCGCGCCGCGCACATCGTCTTCGGCGAGTGG
GGGTGGTGCCATCTACCTGGCCAGCACTGCTTCGCTTCTGCTGGACTATG
ACGTCGCGTTTACTGGAAACGTAAATGATGATGTGACCATCACGGGCGGC
TCGGTGTCATGTCTAAACTCGCTGTACTCTACAGGCCTGGTGAATTGCAC
AAGTGGCTGCACGGGCTCCTACAAAATTCCCGCTAGCTGCCCCGTCTGTT
CGATGAGCAGTGGTAGCACCTGCACGAGCTGTCCCCAGAGGAGCTTCGGG
GGAAGCAGTGCAGCGCTGGTGTGCCAGCACTGCCCGTACGGCTACACAAC
CATCTACCCACCCTCGAGCGTATCGCCATTTGACTGTATCCTAATTACAG
ATTCACCCACGCTCTCACCAACATCCCCGGGGTATGTATATAGGTTCTTG
GTAGTGATGTATCAGACATCCACATTCTTCAGATTTTATAGACTTCTAAC
CTATATCATCACCTTATACAACCATGCAGGGATACCGTCTCCCCCACATC
GAGCCCTACAATAGCGGCGCCCACGGTGGCACCCACGAAGGCGCCCACCC
CCTCCCCGACGACCGAACAGCCGACGGTAAGTCCAACTCCTGTGGGGTAC
AAGGCGCCGGCGATGGCCCACTATTACCACGACAGTTGTATCGCGACGCC
CACCGTACCTGCACCTCCTAGCTTCGCGGACGGCGCTTTGCTAACGGCCG
GGAGCGGCGGCACATATGCACTGCTCTCTCAGGCAATTGATGCAGCCTCT
GCGGGGGACCGCATCCAGATCCTCCCGGGTATTATCGAAGAAACAGCCAC
CGTGACCGTGAGCAAGAGCCTAGAAATCTTCGGGACGGGTCCCGACTGCA
TCGTGCAGCGGGATAGCACGACGGCTGTCATCACAATCGCCGCGGGGACC
AACGACGTCTACATTCACACCCTCGGTGTGATCAACAACCAGGTCCCTAG
TACAGACCCGGGTGGCCTTTCCTCCTGCATCACGGCCGCCACTATGCAAA
CGGCCACTCCAAGTGGCGCCACTGGCATCTATATTGCCAACTCCACCTTC
ACCTTCCCAAAGATGGGCGTGAGCATTGATGCGTCAGACTGGGTGGTACG
GGATTGTGTCTTCACGCCTAACGCCAACGCGCCGGGCACTACTCTCCGCG
CCCTGGCTCCCTATGGTAGCACGGGCCAGTCTTTTGCCACGGGCAACACC
TTCAACAACCCTAGTGAGTCCTCCCGACTTATCGCTGTTTTTATGACCGC
TGCAGGACCTCGGGGGGCGTCCTTCACTACGGGGTGGAAGGGCAATTTCA
CACTGGCCAACAACGTCATAAGCACCTCTGGGGGAGCCCCGCGTGCTTAC
ATTGACACGACTGGCATGTACCGTCAGCCGGGCGATCAAAGTGATCTTGG
TAGCAACGGTGAGTTCTCCATGTACTGCAGGGGAATGACTTCCAGGTGAA
CTACACGTCGTCCCCTGCGCTCTTCTACGTGGGCTACGCCCAGGCGCAGG
CCTTCGGTTTCTTTGACGTACTTCTTGTTAAGGATAATGTCTTTGGGGCG
CGTACCAGTGGCTCCCAAAAGGGTGCTTTGTATTTCACTTCATCACAGGC
GGGAATCTTGGGCTCCTTTGCGGGAGGCTATTACGCCGGGGGCAACTCTT
TTTCCACATCCAATGTTGAACTCGATTCTAACTATGTGGACGCATCTTTT
ACACCCAATTTGTTGGTGATAAATACCAACACATTCACGGCTCCCTCTCC
GCTCATCACGTCCATCTATCCGGCGGCTGCAACTGGTCTTCTCAAGGTAG
ACAGCATACAACTCGTGGCGGGTGATCGTGTCTTTGCTGTGGATAATTGC
GATGCTGTAAAGAACGGTCTTTATACCTCGGAGGCTGGGGCATGGCCCCG
CACGACCGATTTCGCTGTGGGTATGGACGTCTATGCCTCTTTCTTTCAGG
TCATGAACGGGACGGAGTTCGGCGGAACTAGTTGGAACTGCACCAACGAG
GCCGGCTCCGCCGTGGTGGGCACCGACGCACTGTTCTTCAGTCAAGCGTA
GATTCGTTGTTTCCCAAGCTGCCAGGCTGTCAGTCTGCGTTACAAGTAAA
TCTATGTGAAAGTAGAACAACGATTATTATGGAATGGAGGGGTAGACGAG
AGATCAGTAGAAGGGAGGAAAAAGGGAGGAAAAACAGAGCGAAATTGGGG
GAAATCAAAGTATATATTGATGAAAGTGGGAGGATTCTGAGTTGTTATGT
GTGTGTGATGGACTGACTGGTAAGGAGGAAGTTTTCTATTCATGACCAAG
GCCTGCAGCATGATACTGGGCAGGTCGCGAACGTACGATTTCCTACCTCC
GGCGCCATCGACAGGACCGCCAGAGGAGTCACCTGTCGGCAGCAATCGCC
AGTTCTTGTCATGCCGCACCCAGAGAAGCAATTGAAGGTAATTTTGTCGT
GTTGAGTATTAACAATAATAATAATTAGTACTACTATCAACTTTTACTAT
TACTTATTATTATTATTGGTGTGTCGCACGTCCTCGGGATTGAAAAGTGG
AAAATAAAGAAACGAGTGGGACAGCGTTCCCGATCCAAAATCGCTAAATT
ATTTCCGGCAAAGTCCTGATATCATATTGACTAGATGAATCGTAAGGACC
TTAGGCTTAAGAACAAGCGCTGGCATGCACAGAAGGTGGATAAGCATCCT
AATTTGACTAGTTTTACGTATCCCTCCTCCTAATCTAAAGCTGAAGGCAA
TACAGGGAAACATCACAACCAGCAAGAATAAAGAGAAAGCACCCTTATTT
CAACGATAGCCGTCACTTGAATCAGGCTGATAAGTCATCGATTGTGAACA
TAATCATTGAATGTCAACAATTGCCATCACGATGAGAAGTCATTGAATTG
AAACCTAAGGCAGGACTTTGATCATCAATTTATTTTCTTAAAGACTTCTT
TAAGATTGCCCATTGTCTCATTCTCCTCTGAATTCCCCCCTTTCTAATCG
CATATGAGAGAGGACGAAGACAATGACAGAGCCTGACGAGGAGAACCCTC
CTGCAACACCTCTATCCACTCATTATTACCGTTGTAACAGTACTTTTTTT
ACATAACCTTACTCTTTCCTCGTGTTTTACAAAAATGCTGTGTTTTCTCC
CTGCCCCCTTTTCTCTCTCACTCTCCTTTTCTCTCTCATTTTCTCTCTCG
CTCGATGTTTGTTGCTCTCTCATTTAGTGTATGGAGGTTTTGAGATGCTG
CTACTGTATATAGGTCTGTACACTCTGATATTATCAAGGGAAGCGAAGCG
GAAGGGAACGGAGAGAGGGAACGAGGGAGGGAAGGAGAGAAGGCTGGCTA
AAAATGAGGGCGAAAGATCCCGGGCCGACAAGAAGCACGAAGCAACGCTT
CTCCTGCTCCTGCTCCTGCTGCTGCCGCTGCTGCTCCCCACATCAAATGG
GCCTTGGGTGCCGATCGAGGCCGGCCTCTCTTCTTAGGCGG

Coding sequence (CDS) from alignment at scaffold_9:116435..121425-

>mRNA_4590 ID=mRNA_4590|Name=jgi.p|Nanoce1779_2|587091|organism=Nannochloropsis oceanica|type=CDS|length=3300bp|location=Sequence derived from alignment at scaffold_9:116435..121425- (Nannochloropsis oceanica)
GGATACCGTCTCCCCCACATCGAGCCCTACAATAGCGGCGCCCACGGTGG
CACCCACGAAGGCGCCCACCCCCTCCCCGACGACCGAACAGCCGACGGTA
AGTCCAACTCCTGTGGGGTACAAGGCGCCGGCGATGGCCCACTATTACCA
CGACAGTTGTATCGCGACGCCCACCGTACCTGCACCTCCTAGCTTCGCGG
ACGGCGCTTTGCTAACGGCCGGGAGCGGCGGCACATATGCACTGCTCTCT
CAGGCAATTGATGCAGCCTCTGCGGGGGACCGCATCCAGATCCTCCCGGG
TATTATCGAAGAAACAGCCACCGTGACCGTGAGCAAGAGCCTAGAAATCT
TCGGGACGGGTCCCGACTGCATCGTGCAGCGGGATAGCACGACGGCTGTC
ATCACAATCGCCGCGGGGACCAACGACGTCTACATTCACACCCTCGGTGT
GATCAACAACCAGGTCCCTAGTACAGACCCGGGTGGCCTTTCCTCCTGCA
TCACGGCCGCCACTATGCAAACGGCCACTCCAAGTGGCGCCACTGGCATC
TATATTGCCAACTCCACCTTCACCTTCCCAAAGATGGGCGTGAGCATTGA
TGCGTCAGACTGGGTGGTACGGGATTGTGTCTTCACGCCTAACGCCAACG
CGCCGGGCACTACTCTCCGCGCCCTGGCTCCCTATGGTAGCACGGGCCAG
TCTTTTGCCACGGGCAACACCTTCAACAACCCTAGTGAGTCCTCCCGACT
TATCGCTGTTTTTATGACCGCTGCAGGACCTCGGGGGGCGTCCTTCACTA
CGGGGTGGAAGGGCAATTTCACACTGGCCAACAACGTCATAAGCACCTCT
GGGGGAGCCCCGCGTGCTTACATTGACACGACTGGCATGTACCGTCAGCC
GGGCGATCAAAGTGATCTTGGTAGCAACGGTGAGTTCTCCATGTACTGCA
GGGGAATGACTTCCAGGTGAATGGTATCACTCTTCAAGGCGCCTCAACTG
GTCCCACATCTGGAGGCGTGGAACTTCAGAACGGGGCCAAGGGGCTGTTT
GTTAGCACGAAGTTCCGCGCCTGTCGCAGCACGGGGGAAGGTGGCAGTTT
TAGGCTCATCGGAGGGTCCTCTTGCTCCGTGGGCACGGGGTGTGTTTGTC
AGCAATGCTGGTGCCCAGGGTGGGGCCATCTACGCCGGGGCAGGCTGCTC
GGTGACCGTCAATAACACGGTTTCATTTACAAACAACTCCGCGCCGCGCA
CATCGTCTTCGGCGAGTGGGGGTGGTGCCATCTACCTGGCCAGCACTGCT
TCGCTTCTGCTGGACTATGACGTCGCGTTTACTGGAAACGTAAATGATGA
TGTGACCATCACGGGCGGCTCGGTGTCATGTCTAAACTCGCTGTACTCTA
CAGGCCTGGTGAATTGCACAAGTGGCTGCACGGGCTCCTACAAAATTCCC
GCTAGCTGCCCCGTCTGTTCGATGAGCAGTGGTAGCACCTGCACGAGCTG
TCCCCAGAGGAGCTTCGGGGGAAGCAGTGCAGCGCTGGTGTGCCAGCACT
GCCCGTACGGCTACACAACCATCTACCCACCCTCGAGCGTATCGCCATTT
GACTGTATCCTAATTACAGATTCACCCACGCTCTCACCAACATCCCCGGG
GGATACCGTCTCCCCCACATCGAGCCCTACAATAGCGGCGCCCACGGTGG
CACCCACGAAGGCGCCCACCCCCTCCCCGACGACCGAACAGCCGACGGTA
AGTCCAACTCCTGTGGGGTACAAGGCGCCGGCGATGGCCCACTATTACCA
CGACAGTTGTATCGCGACGCCCACCGTACCTGCACCTCCTAGCTTCGCGG
ACGGCGCTTTGCTAACGGCCGGGAGCGGCGGCACATATGCACTGCTCTCT
CAGGCAATTGATGCAGCCTCTGCGGGGGACCGCATCCAGATCCTCCCGGG
TATTATCGAAGAAACAGCCACCGTGACCGTGAGCAAGAGCCTAGAAATCT
TCGGGACGGGTCCCGACTGCATCGTGCAGCGGGATAGCACGACGGCTGTC
ATCACAATCGCCGCGGGGACCAACGACGTCTACATTCACACCCTCGGTGT
GATCAACAACCAGGTCCCTAGTACAGACCCGGGTGGCCTTTCCTCCTGCA
TCACGGCCGCCACTATGCAAACGGCCACTCCAAGTGGCGCCACTGGCATC
TATATTGCCAACTCCACCTTCACCTTCCCAAAGATGGGCGTGAGCATTGA
TGCGTCAGACTGGGTGGTACGGGATTGTGTCTTCACGCCTAACGCCAACG
CGCCGGGCACTACTCTCCGCGCCCTGGCTCCCTATGGTAGCACGGGCCAG
TCTTTTGCCACGGGCAACACCTTCAACAACCCTAGTGAGTCCTCCCGACT
TATCGCTGTTTTTATGACCGCTGCAGGACCTCGGGGGGCGTCCTTCACTA
CGGGGTGGAAGGGCAATTTCACACTGGCCAACAACGTCATAAGCACCTCT
GGGGGAGCCCCGCGTGCTTACATTGACACGACTGGCATGTACCGTCAGCC
GGGCGATCAAAGTGATCTTGGTAGCAACGGTGAGTTCTCCATGTACTGCA
GGGGAATGACTTCCAGGTGAATGGTATCACTCTTCAAGGCGCCTCAACTG
GTCCCACATCTGGAGGCGTGGAACTTCAGAACGGGGCCAAGGGGCTGTTT
GTTAGCACGAAGTTCCGCGCCTGTCGCAGCACGGGGGAAGGTGGCAGTTT
TAGGCTCATCGGAGGGTCCTCTTGCTCCGTGGGCACGGGGTGTGTTTGTC
AGCAATGCTGGTGCCCAGGGTGGGGCCATCTACGCCGGGGCAGGCTGCTC
GGTGACCGTCAATAACACGGTTTCATTTACAAACAACTCCGCGCCGCGCA
CATCGTCTTCGGCGAGTGGGGGTGGTGCCATCTACCTGGCCAGCACTGCT
TCGCTTCTGCTGGACTATGACGTCGCGTTTACTGGAAACGTAAATGATGA
TGTGACCATCACGGGCGGCTCGGTGTCATGTCTAAACTCGCTGTACTCTA
CAGGCCTGGTGAATTGCACAAGTGGCTGCACGGGCTCCTACAAAATTCCC
GCTAGCTGCCCCGTCTGTTCGATGAGCAGTGGTAGCACCTGCACGAGCTG
TCCCCAGAGGAGCTTCGGGGGAAGCAGTGCAGCGCTGGTGTGCCAGCACT
GCCCGTACGGCTACACAACCATCTACCCACCCTCGAGCGTATCGCCATTT
GACTGTATCCTAATTACAGATTCACCCACGCTCTCACCAACATCCCCGGG

Synonyms

Publications