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Properties
Property Name | Value |
TranscriptId | 436530 |
Track | FilteredModels2 |
ProteinId | 436444 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_9 | supercontig | scaffold_9:101421..103667 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4586 ID=mRNA_4586|Name=jgi.p|Nanoce1779_2|436444|organism=Nannochloropsis oceanica|type=mRNA|length=1591bp GGTCAAGGTGATTCGGAAGGAAGACTTTCTGATGAAATTGGCAGTGGCCT TGTTGTCGTACGGGTGTCCCATACCCAGGATTGAGCACAGCATGCAAGTC CTGCTAAAGACTCTGGGGTTGGAAGGCTCGTTCACTGTCCTCCCGTCCAT GATGTTCATTTCCTTTGGCGTAGCTATCTCCTCCAATTCGGAGACGCATA TTCTTCGGGTGGGGGGAGGGTTGGATGTCTACAAGCTGCGGCGCGTGAAT CATTTGGTGAACCAAATTGTGGAACACCGCATCCTGGACCTACCCCACGC AATAAGCAAGCTTGACAGTCTTATCGCCGAACAGTCCCTGTACAATTGGC AAACCAAAGTGGCCTGCTACGCCATTGCCTCAGCCTGTGTCGCCCCTCTC TACTTCCATGGCTCCCTGACCGACGGACTTCTCACAGGAATAGTAGGGTT CTTCGCCGGCTGTCTATGGGTGCTCTCGGATGCGTCCTATATCTTGGGGA AAATAGGCTTAATTACCTCGGCTATTTTATCTTCCTTCCTTGGCACCGTT CTTTCCGCCCATGTTCCCGGGAGATGTGCGCTAGCTATCCATTTTGGTCC CATCACCTACCTTCTGCCTGGATGGAGCATTACCTCTGCGGTTATCGAAC TTGCCACGCAGAATGTCCTTTCAGGAACAACACGGATGATGACAGCGTTG ATGAATGCGCTCCTATTGGGCTTCGGCCTCGACCTAGGCCATCGAATGGC TTTTTGGGAGGCGGATGACAGTTGGGTGTCCATGGAAAATTGCACTGGTG TTTCCAACAGTGTCAAAATACCCCTGTTCCTCACAACCGTAACATGTTTT AATATCCTGATGAAAGGGGCGCCTGCCCAATGGCTGGGCATGCTTTGTGT GGCCACCATCTCTTACGTGACTATCAACGTCGCAAGTACCGTGGGCGGAA TGTCTCCGAGTAGTGCTACCGTGGTGACTGCGTTTTTGGTCGGTATCGCT GGAAACCTGTATGCTTACGCAACCAACAGCCCGGCATTGATCCCGATACT TTCGGGTGTCTTTTTGATTGTGCCGGGAGGGATCAGCGTGAAAGGGGTGC ATGCAATGATCAATAACGACATGAGCGGAGGCTTGGCATTTGGGAGTGGG ATGATGGTGGTGGCGGTCTGCATCTCCATTGGTTTGTTTGCAGCCAGCAT CGTCATGTATAAGCCCAAGGTGAAGTTGTCGAATACCGTCTTCTTCTAGC ATTTTCACCTCTGGTCATCCGGGCATGCATCCTTATTAAAGTTGAAATGG GTTAAGGTAACGGCCACCAATTCATCTGCATGGCCTCTTGAGTGGTTATG TTACAATTAGTGTATGAATAGATGCGCTCAGCTTAGCGGAGCATAGGTTC ACACCAGATAATGTCGTTTCTTTATGTTTAGTGATAAATTAACTAGAAAA TTCTAGAGAAGTTGATGAGAAAGTGTTTACAAAAAAACATAAAAAATAAA GTTCGCATTCGTGTGTGTCTAGTGGTAAATGAAATAGAAAGTAAAATTTA GGGAATATGTCGGGAGGGTGAATATGAGAAAGAATATACGA back to topprotein sequence of jgi.p|Nanoce1779_2|436444 >mRNA_4586-protein ID=mRNA_4586-protein|Name=jgi.p|Nanoce1779_2|436444|organism=Nannochloropsis oceanica|type=polypeptide|length=406bp MKLAVALLSYGCPIPRIEHSMQVLLKTLGLEGSFTVLPSMMFISFGVAIS SNSETHILRVGGGLDVYKLRRVNHLVNQIVEHRILDLPHAISKLDSLIAE QSLYNWQTKVACYAIASACVAPLYFHGSLTDGLLTGIVGFFAGCLWVLSD ASYILGKIGLITSAILSSFLGTVLSAHVPGRCALAIHFGPITYLLPGWSI TSAVIELATQNVLSGTTRMMTALMNALLLGFGLDLGHRMAFWEADDSWVS MENCTGVSNSVKIPLFLTTVTCFNILMKGAPAQWLGMLCVATISYVTINV ASTVGGMSPSSATVVTAFLVGIAGNLYAYATNSPALIPILSGVFLIVPGG ISVKGVHAMINNDMSGGLAFGSGMMVVAVCISIGLFAASIVMYKPKVKLS NTVFF* back to topmRNA from alignment at scaffold_9:101421..103667+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4586 ID=mRNA_4586|Name=jgi.p|Nanoce1779_2|436444|organism=Nannochloropsis oceanica|type=mRNA|length=2247bp|location=Sequence derived from alignment at scaffold_9:101421..103667+ (Nannochloropsis oceanica) GGTCAAGGTGATTCGGAAGGAAGACTTTCTGATGAAATTGGCAGTGGCCT
TGTTGTCGTACGGGTGTCCCATACCCAGGATTGAGCACAGCATGCAAGGT
AATAAACGCAAGAAGGAGGGGAGGAAAGGAGAGGGAGGGAAGGAGAGGAA
GGGAGGGAGGGAAGAAGGGGATGGGTTTATAGAGGGAAAATGTTTAGAGG
TATGCTGAGTTCCAAAATGCCTGGATTCAATTTCCCTCCCCCCTCTTGTT
TACATTTGACTTGTGAGAAATGCAAGGAAGATGCTTACAAGGCCAACCCA
CGCATTCATACTTTCGTGTTCTTTACGCCCTCCCTTCCCTTCCTTCTTCC
CTCCCTCTGTGCAGTCCTGCTAAAGACTCTGGGGTTGGAAGGCTCGTTCA
CTGTCCTCCCGTCCATGATGTTCATTTCCTTTGGCGTAGCTATCTCCTCC
AATTCGGAGACGCATATTCTTCGGGTGGGGGGAGGGTTGGATGTCTACAA
GCTGCGGCGCGTGAATCATTTGGGTAAGAAGGAAGGGACAGAGAGATGGG
AGAGAGAAAACGCCAATAAACTGGAAGGTAGCTGTTCATTCATAATATTA
TTTTTTTTAATTATCACTGCTGCATAGCCACCTGTGTGCGAGCAATGCAT
GTAAAGGGATGGCGTACTCATTCATGTCTCCCGCCCTAATCTCCCTTCAG
TGAACCAAATTGTGGAACACCGCATCCTGGACCTACCCCACGCAATAAGC
AAGCTTGACAGTCTTATCGCCGAACAGTCCCTGTACAATTGGCAAACCAA
AGTGGCCTGCTACGCCATTGCCTCAGCCTGTGTCGCCCCTCTCTACTTCC
ATGGCTCCCTGACCGACGGACTTCTCACAGGAATAGTAGGGTTCTTCGCC
GGCTGTCTATGGGTGCTCTCGGATGCGTCCTATATCTTGGGGAAAATAGG
CTTAATTACCTCGGCTATTTTATCTTCCTTCCTTGGCACCGTTCTTTCCG
CCCATGTTCCCGGGAGATGTGCGCTAGCTATCCATTTTGGTCCCATCACC
TACCTTCTGCCTGGATGGAGCATTACCTCTGCGGTTATCGGTAAGTCTCA
ATTTCGATGTTCCTTTATTTCACATTTTTCGCTTGTGGAATGCCTTGTAA
TCATTGGTATCAATTTTTCCATCTTTTCTTCTTCTACTCTTTCATCAGAA
CTTGCCACGCAGAATGTCCTTTCAGGAACAACACGGATGATGACAGCGTT
GATGAATGCGCTCCTATTGGGCTTCGGCCTCGACCTAGGTAAGTCATCTG
GTCAGATAAATCTGACCATGGCACTTTCTTAAAATTTAATCGATGCATTC
ATTTTTACATTTAAAGTCTCAATAAACACAAATCTGTATGTAGGCCATCG
AATGGCTTTTTGGGAGGCGGATGACAGTTGGGTGTCCATGGAAAATTGCA
CTGGTGTTTCCAACAGTGTCAAAATACCCCTGTTCCTCACAACCGTAACA
TGTTTTAATATCCTGATGAAAGGGGCGCCTGCCCAATGGCTGGGCATGCT
TTGTGTGGCCACCATCTCTTACGTGACTATCAACGTCGCAAGTACCGTGG
GCGGAATGTCTCCGAGTAGTGCTACCGTGGTGACTGCGTTTTTGGTCGGT
ATCGCTGGAAACCTGTATGCTTACGCAACCAACAGCCCGGCATTGATCCC
GATACTTTCGGGTGTCTTTTTGATTGTGCCGGGAGGGATCAGCGTGAAAG
GGGTGCATGCAATGATCAATAACGACATGAGCGGAGGCTTGGCATTTGGG
AGTGGGATGATGGTGGTGGCGGTCTGCATCTCCATTGGTTTGTTTGCAGC
CAGCATCGTCATGTATAAGCCCAAGGTGAAGTTGTCGAATACCGTCTTCT
TCTAGCATTTTCACCTCTGGTCATCCGGGCATGCATCCTTATTAAAGTTG
AAATGGGTTAAGGTAACGGCCACCAATTCATCTGCATGGCCTCTTGAGTG
GTTATGTTACAATTAGTGTATGAATAGATGCGCTCAGCTTAGCGGAGCAT
AGGTTCACACCAGATAATGTCGTTTCTTTATGTTTAGTGATAAATTAACT
AGAAAATTCTAGAGAAGTTGATGAGAAAGTGTTTACAAAAAAACATAAAA
AATAAAGTTCGCATTCGTGTGTGTCTAGTGGTAAATGAAATAGAAAGTAA
AATTTAGGGAATATGTCGGGAGGGTGAATATGAGAAAGAATATACGA back to topCoding sequence (CDS) from alignment at scaffold_9:101421..103667+ >mRNA_4586 ID=mRNA_4586|Name=jgi.p|Nanoce1779_2|436444|organism=Nannochloropsis oceanica|type=CDS|length=6090bp|location=Sequence derived from alignment at scaffold_9:101421..103667+ (Nannochloropsis oceanica) ATGAAATTGGCAGTGGCCTTGTTGTCGTACGGGTGTCCCATACCCAGGAT TGAGCACAGCATGCAAGTCCTGCTAAAGACTCTGGGGTTGGAAGGCTCGT TCACTGTCCTCCCGTCCATGATGTTCATTTCCTTTGGCGTAGCTATCTCC TCCAATTCGGAGACGCATATTCTTCGGGTGGGGGGAGGGTTGGATGTCTA CAAGCTGCGGCGCGTGAATCATTTGGTGAACCAAATTGTGGAACACCGCA TCCTGGACCTACCCCACGCAATAAGCAAGCTTGACAGTCTTATCGCCGAA CAGTCCCTGTACAATTGGCAAACCAAAGTGGCCTGCTACGCCATTGCCTC AGCCTGTGTCGCCCCTCTCTACTTCCATGGCTCCCTGACCGACGGACTTC TCACAGGAATAGTAGGGTTCTTCGCCGGCTGTCTATGGGTGCTCTCGGAT GCGTCCTATATCTTGGGGAAAATAGGCTTAATTACCTCGGCTATTTTATC TTCCTTCCTTGGCACCGTTCTTTCCGCCCATGTTCCCGGGAGATGTGCGC TAGCTATCCATTTTGGTCCCATCACCTACCTTCTGCCTGGATGGAGCATT ACCTCTGCGGTTATCGAACTTGCCACGCAGAATGTCCTTTCAGGAACAAC ACGGATGATGACAGCGTTGATGAATGCGCTCCTATTGGGCTTCGGCCTCG ACCTAGGCCATCGAATGGCTTTTTGGGAGGCGGATGACAGTTGGGTGTCC ATGGAAAATTGCACTGGTGTTTCCAACAGTGTCAAAATACCCCTGTTCCT CACAACCGTAACATGTTTTAATATCCTGATGAAAGGGGCGCCTGCCCAAT GGCTGGGCATGCTTTGTGTGGCCACCATCTCTTACGTGACTATCAACGTC GCAAGTACCGTGGGCGGAATGTCTCCGAGTAGTGCTACCGTGGTGACTGC GTTTTTGGTCGGTATCGCTGGAAACCTGTATGCTTACGCAACCAACAGCC CGGCATTGATCCCGATACTTTCGGGTGTCTTTTTGATTGTGCCGGGAGGG ATCAGCGTGAAAGGGGTGCATGCAATGATCAATAACGACATGAGCGGAGG CTTGGCATTTGGGAGTGGGATGATGGTGGTGGCGGTCTGCATCTCCATTG GTTTGTTTGCAGCCAGCATCGTCATGTATAAGCCCAAGGTGAAGTTGTCG AATACCGTCTTCTTCTAGATGAAATTGGCAGTGGCCTTGTTGTCGTACGG GTGTCCCATACCCAGGATTGAGCACAGCATGCAAGTCCTGCTAAAGACTC TGGGGTTGGAAGGCTCGTTCACTGTCCTCCCGTCCATGATGTTCATTTCC TTTGGCGTAGCTATCTCCTCCAATTCGGAGACGCATATTCTTCGGGTGGG GGGAGGGTTGGATGTCTACAAGCTGCGGCGCGTGAATCATTTGGTGAACC AAATTGTGGAACACCGCATCCTGGACCTACCCCACGCAATAAGCAAGCTT GACAGTCTTATCGCCGAACAGTCCCTGTACAATTGGCAAACCAAAGTGGC CTGCTACGCCATTGCCTCAGCCTGTGTCGCCCCTCTCTACTTCCATGGCT CCCTGACCGACGGACTTCTCACAGGAATAGTAGGGTTCTTCGCCGGCTGT CTATGGGTGCTCTCGGATGCGTCCTATATCTTGGGGAAAATAGGCTTAAT TACCTCGGCTATTTTATCTTCCTTCCTTGGCACCGTTCTTTCCGCCCATG TTCCCGGGAGATGTGCGCTAGCTATCCATTTTGGTCCCATCACCTACCTT CTGCCTGGATGGAGCATTACCTCTGCGGTTATCGAACTTGCCACGCAGAA TGTCCTTTCAGGAACAACACGGATGATGACAGCGTTGATGAATGCGCTCC TATTGGGCTTCGGCCTCGACCTAGGCCATCGAATGGCTTTTTGGGAGGCG GATGACAGTTGGGTGTCCATGGAAAATTGCACTGGTGTTTCCAACAGTGT CAAAATACCCCTGTTCCTCACAACCGTAACATGTTTTAATATCCTGATGA AAGGGGCGCCTGCCCAATGGCTGGGCATGCTTTGTGTGGCCACCATCTCT TACGTGACTATCAACGTCGCAAGTACCGTGGGCGGAATGTCTCCGAGTAG TGCTACCGTGGTGACTGCGTTTTTGGTCGGTATCGCTGGAAACCTGTATG CTTACGCAACCAACAGCCCGGCATTGATCCCGATACTTTCGGGTGTCTTT TTGATTGTGCCGGGAGGGATCAGCGTGAAAGGGGTGCATGCAATGATCAA TAACGACATGAGCGGAGGCTTGGCATTTGGGAGTGGGATGATGGTGGTGG CGGTCTGCATCTCCATTGGTTTGTTTGCAGCCAGCATCGTCATGTATAAG CCCAAGGTGAAGTTGTCGAATACCGTCTTCTTCTAGATGAAATTGGCAGT GGCCTTGTTGTCGTACGGGTGTCCCATACCCAGGATTGAGCACAGCATGC AAGTCCTGCTAAAGACTCTGGGGTTGGAAGGCTCGTTCACTGTCCTCCCG TCCATGATGTTCATTTCCTTTGGCGTAGCTATCTCCTCCAATTCGGAGAC GCATATTCTTCGGGTGGGGGGAGGGTTGGATGTCTACAAGCTGCGGCGCG TGAATCATTTGGTGAACCAAATTGTGGAACACCGCATCCTGGACCTACCC CACGCAATAAGCAAGCTTGACAGTCTTATCGCCGAACAGTCCCTGTACAA TTGGCAAACCAAAGTGGCCTGCTACGCCATTGCCTCAGCCTGTGTCGCCC CTCTCTACTTCCATGGCTCCCTGACCGACGGACTTCTCACAGGAATAGTA GGGTTCTTCGCCGGCTGTCTATGGGTGCTCTCGGATGCGTCCTATATCTT GGGGAAAATAGGCTTAATTACCTCGGCTATTTTATCTTCCTTCCTTGGCA CCGTTCTTTCCGCCCATGTTCCCGGGAGATGTGCGCTAGCTATCCATTTT GGTCCCATCACCTACCTTCTGCCTGGATGGAGCATTACCTCTGCGGTTAT CGAACTTGCCACGCAGAATGTCCTTTCAGGAACAACACGGATGATGACAG CGTTGATGAATGCGCTCCTATTGGGCTTCGGCCTCGACCTAGGCCATCGA ATGGCTTTTTGGGAGGCGGATGACAGTTGGGTGTCCATGGAAAATTGCAC TGGTGTTTCCAACAGTGTCAAAATACCCCTGTTCCTCACAACCGTAACAT GTTTTAATATCCTGATGAAAGGGGCGCCTGCCCAATGGCTGGGCATGCTT TGTGTGGCCACCATCTCTTACGTGACTATCAACGTCGCAAGTACCGTGGG CGGAATGTCTCCGAGTAGTGCTACCGTGGTGACTGCGTTTTTGGTCGGTA TCGCTGGAAACCTGTATGCTTACGCAACCAACAGCCCGGCATTGATCCCG ATACTTTCGGGTGTCTTTTTGATTGTGCCGGGAGGGATCAGCGTGAAAGG GGTGCATGCAATGATCAATAACGACATGAGCGGAGGCTTGGCATTTGGGA GTGGGATGATGGTGGTGGCGGTCTGCATCTCCATTGGTTTGTTTGCAGCC AGCATCGTCATGTATAAGCCCAAGGTGAAGTTGTCGAATACCGTCTTCTT CTAGATGAAATTGGCAGTGGCCTTGTTGTCGTACGGGTGTCCCATACCCA GGATTGAGCACAGCATGCAAGTCCTGCTAAAGACTCTGGGGTTGGAAGGC TCGTTCACTGTCCTCCCGTCCATGATGTTCATTTCCTTTGGCGTAGCTAT CTCCTCCAATTCGGAGACGCATATTCTTCGGGTGGGGGGAGGGTTGGATG TCTACAAGCTGCGGCGCGTGAATCATTTGGTGAACCAAATTGTGGAACAC CGCATCCTGGACCTACCCCACGCAATAAGCAAGCTTGACAGTCTTATCGC CGAACAGTCCCTGTACAATTGGCAAACCAAAGTGGCCTGCTACGCCATTG CCTCAGCCTGTGTCGCCCCTCTCTACTTCCATGGCTCCCTGACCGACGGA CTTCTCACAGGAATAGTAGGGTTCTTCGCCGGCTGTCTATGGGTGCTCTC GGATGCGTCCTATATCTTGGGGAAAATAGGCTTAATTACCTCGGCTATTT TATCTTCCTTCCTTGGCACCGTTCTTTCCGCCCATGTTCCCGGGAGATGT GCGCTAGCTATCCATTTTGGTCCCATCACCTACCTTCTGCCTGGATGGAG CATTACCTCTGCGGTTATCGAACTTGCCACGCAGAATGTCCTTTCAGGAA CAACACGGATGATGACAGCGTTGATGAATGCGCTCCTATTGGGCTTCGGC CTCGACCTAGGCCATCGAATGGCTTTTTGGGAGGCGGATGACAGTTGGGT GTCCATGGAAAATTGCACTGGTGTTTCCAACAGTGTCAAAATACCCCTGT TCCTCACAACCGTAACATGTTTTAATATCCTGATGAAAGGGGCGCCTGCC CAATGGCTGGGCATGCTTTGTGTGGCCACCATCTCTTACGTGACTATCAA CGTCGCAAGTACCGTGGGCGGAATGTCTCCGAGTAGTGCTACCGTGGTGA CTGCGTTTTTGGTCGGTATCGCTGGAAACCTGTATGCTTACGCAACCAAC AGCCCGGCATTGATCCCGATACTTTCGGGTGTCTTTTTGATTGTGCCGGG AGGGATCAGCGTGAAAGGGGTGCATGCAATGATCAATAACGACATGAGCG GAGGCTTGGCATTTGGGAGTGGGATGATGGTGGTGGCGGTCTGCATCTCC ATTGGTTTGTTTGCAGCCAGCATCGTCATGTATAAGCCCAAGGTGAAGTT GTCGAATACCGTCTTCTTCTAGATGAAATTGGCAGTGGCCTTGTTGTCGT ACGGGTGTCCCATACCCAGGATTGAGCACAGCATGCAAGTCCTGCTAAAG ACTCTGGGGTTGGAAGGCTCGTTCACTGTCCTCCCGTCCATGATGTTCAT TTCCTTTGGCGTAGCTATCTCCTCCAATTCGGAGACGCATATTCTTCGGG TGGGGGGAGGGTTGGATGTCTACAAGCTGCGGCGCGTGAATCATTTGGTG AACCAAATTGTGGAACACCGCATCCTGGACCTACCCCACGCAATAAGCAA GCTTGACAGTCTTATCGCCGAACAGTCCCTGTACAATTGGCAAACCAAAG TGGCCTGCTACGCCATTGCCTCAGCCTGTGTCGCCCCTCTCTACTTCCAT GGCTCCCTGACCGACGGACTTCTCACAGGAATAGTAGGGTTCTTCGCCGG CTGTCTATGGGTGCTCTCGGATGCGTCCTATATCTTGGGGAAAATAGGCT TAATTACCTCGGCTATTTTATCTTCCTTCCTTGGCACCGTTCTTTCCGCC CATGTTCCCGGGAGATGTGCGCTAGCTATCCATTTTGGTCCCATCACCTA CCTTCTGCCTGGATGGAGCATTACCTCTGCGGTTATCGAACTTGCCACGC AGAATGTCCTTTCAGGAACAACACGGATGATGACAGCGTTGATGAATGCG CTCCTATTGGGCTTCGGCCTCGACCTAGGCCATCGAATGGCTTTTTGGGA GGCGGATGACAGTTGGGTGTCCATGGAAAATTGCACTGGTGTTTCCAACA GTGTCAAAATACCCCTGTTCCTCACAACCGTAACATGTTTTAATATCCTG ATGAAAGGGGCGCCTGCCCAATGGCTGGGCATGCTTTGTGTGGCCACCAT CTCTTACGTGACTATCAACGTCGCAAGTACCGTGGGCGGAATGTCTCCGA GTAGTGCTACCGTGGTGACTGCGTTTTTGGTCGGTATCGCTGGAAACCTG TATGCTTACGCAACCAACAGCCCGGCATTGATCCCGATACTTTCGGGTGT CTTTTTGATTGTGCCGGGAGGGATCAGCGTGAAAGGGGTGCATGCAATGA TCAATAACGACATGAGCGGAGGCTTGGCATTTGGGAGTGGGATGATGGTG GTGGCGGTCTGCATCTCCATTGGTTTGTTTGCAGCCAGCATCGTCATGTA TAAGCCCAAGGTGAAGTTGTCGAATACCGTCTTCTTCTAG back to top
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