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Properties
| Property Name | Value |
|---|
| TranscriptId | 436471 |
| Track | FilteredModels2 |
| ProteinId | 436385 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:86177..87777 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4583 ID=mRNA_4583|Name=jgi.p|Nanoce1779_2|436385|organism=Nannochloropsis oceanica|type=mRNA|length=872bp
TCACACAAGATGAAAGGGTGCAGGAGGATAAGGAAGGAGGGAGGGAGAGA
GGAAGGGAGCACATGGATAACCGTTCCCCCTTCCCTCCCTCTCCAGTTAC
TGCTCCGCTTCCTTCTCCGGGCGCATGCCCATGGCAGAGCTCGCTGACGC
TATTGTATCGACGGGGAGGAGGACACTGATGCATGCCGTCGAACACGTGC
ATAAGTCGCCTGTGTGGCAGCCGGCGCAGGTGGTGTACGGCGACACGGAC
TCCCTCTTTGTCTGCTTTCGGGGCCGATCCACAGCACAAGCATTGAGAGA
GGGGAAGGCTTTGGCTCAGGCCGTCACTACCCTCAATCCTCCGGGTGTGG
TGCTGCAATTCGAGAAAGTGTATGCCACCTGTGTCTTGATCAGTAAGAAA
CGCTACGTGGGCCAGGCGTTCGAGAAGGAGGAGGAGGTGGAGGGAGGGGA
AGAGGGAGGGAAATGGGGCGGGCGATTTGACGCCAAAGGCATTGAAGTTG
TTAGACGGGACGGGTGTCCGTTGGTGGTTAAGGTTCAAGAGAAAGCCTTA
CGCATCCTCTTTGAGACCCGCGACCTCTCCGCAGTCAAAGCCTACCTCCT
GCGACAGCTGGCCAAGATCCAGGCCGGCCGTGTGCGTCTACAGGATTTCA
TTTTTGCCAAAGAAGTGAAATTGGCTCCTTCCCTCCCTATGCCCTTCATG
ACAGAGCTCACCCTCCTCCGTCCGCCTGTGTCGCCCTTCGTGCCATGGCC
TCCGACCCTCGGGCCGTCCCTCGGTATGGTGAGCGTGTGCCGTACGTGGT
CGTCACTGGCCCGCCCGTCACGCGCCTGATGGATCAAGTAGTCGATCCCC
GCGTCCTTCTCCCAGGTCCCGG back to topprotein sequence of jgi.p|Nanoce1779_2|436385 >mRNA_4583-protein ID=mRNA_4583-protein|Name=jgi.p|Nanoce1779_2|436385|organism=Nannochloropsis oceanica|type=polypeptide|length=235bp
MPMAELADAIVSTGRRTLMHAVEHVHKSPVWQPAQVVYGDTDSLFVCFRG
RSTAQALREGKALAQAVTTLNPPGVVLQFEKVYATCVLISKKRYVGQAFE
KEEEVEGGEEGGKWGGRFDAKGIEVVRRDGCPLVVKVQEKALRILFETRD
LSAVKAYLLRQLAKIQAGRVRLQDFIFAKEVKLAPSLPMPFMTELTLLRP
PVSPFVPWPPTLGPSLGMVSVCRTWSSLARPSRA* back to topmRNA from alignment at scaffold_9:86177..87777- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4583 ID=mRNA_4583|Name=jgi.p|Nanoce1779_2|436385|organism=Nannochloropsis oceanica|type=mRNA|length=1601bp|location=Sequence derived from alignment at scaffold_9:86177..87777- (Nannochloropsis oceanica)
TCACACAAGATGAAAGGGTGCAGGAGGATAAGGAAGGAGGGAGGGAGAGA
GGAAGGGAGCACATGGATAACCGTTCCCCCTTCCCTCCCTCTCCAGTTAC
TGCTCCGCTTCCTTCTCCGGGCGCATGCCCATGGCAGAGCTCGCTGACGC
TATTGTATCGACGGGGAGGAGGACACTGATGCATGCCGTCGAACACGTGC
ATAAGTCGCCTGTGTGGCAGCCGGCGCAGGTGAGGAGGGAGGGGCGAGGG
AGCGGGTGGGGGGGAAGGCAGGAGAGGGAGGGAGGGTGGGAAATGAACGA
TGAAGCTTTGCACTGCAACGTTCTCATTAACTCACTCCTCCCCATCCCTC
TCTTTCTTGCCTTTCTTTTTATCCCCTTCCTTCCTCCCTCCCTTCCTCCC
TTCCTTCTTCCCTCATCCTTTCCATAGGTGGTGTACGGCGACACGGACTC
CCTCTTTGTCTGCTTTCGGGGCCGATCCACAGCACAAGCATTGAGGTGGG
GAGGGAGGGAGGGATGGAAGGAGGAAAGGAGGGAGGGAAAGAGGGAGAGA
GAGAGATGACGTGAAAGATGGAGGGCCCTACCTTCCTCGTCTTACCCCTC
CCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCGCTTAGAGAGGGGAAGGC
TTTGGCTCAGGCCGTCACTACCCTCAATCCTCCGGGTGTGGTGCTGCAAT
TCGAGAAAGTGTATGCCACCTGTGTCTTGATCAGTAAGAAACGCTACGTG
GGCCAGGCGTTCGAGAAGGAGGAGGAGGTGGAGGGAGGGGAAGAGGGAGG
GAAATGGGGCGGGCGATTTGACGCCAAAGGCATTGAAGTTGTTAGACGGG
ACGGGTGTCCGTTGGTGGTTAAGGTTCAAGAGAAAGCCTTACGCATCCTC
TTTGAGGTGCGTCCTCCCTCCCTCCCTCCCTCCCTCCCTTGCTTCCATCC
CTTAGGTCCGAGACCCCTCCCTCCAGTGTGAAGACCTGCGTCTTGCAGCA
GCCATTGAAAGAAATCAATTCCGCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTTCCCCAGACCCGCGACCTCTCCGCAGTCAAAGCCT
ACCTCCTGCGACAGCTGGCCAAGATCCAGGCCGGCCGTGTGCGTCTACAG
GATTTCATTTTTGCCAAAGAAGTGAAATTGGGCTCCTACAAGTAAAGAGG
GAGGGAGGGAGGGAGGGAGGGAGGAAGCCGGAGACGAATGGGTGCTTTTC
TGTCGTTTCCCTTTGCTTATTCTTTGTTTTTCTCCCTCCCTCCCTCCCTC
CTTCCCTCCCTATGCCCTTCATGACAGAGCTCACCCTCCTCCGTCCGCCT
GTGTCGCCCTTCGTGCCATGGCCTCCGACCCTCGGGCCGTCCCTCGGTAC
GTCCCTCCCTCCCTCCCTCCCTCCCTCCTTTCCTCCCTCCCTCGTTCCCC
CCCCACACCATTCCTCCCTCCCTCCCTCCCTCCCTCTTCCCCTCCTTCAT
AGGTATGGTGAGCGTGTGCCGTACGTGGTCGTCACTGGCCCGCCCGTCAC
GCGCCTGATGGATCAAGTAGTCGATCCCCGCGTCCTTCTCCCAGGTCCCG
G back to topCoding sequence (CDS) from alignment at scaffold_9:86177..87777- >mRNA_4583 ID=mRNA_4583|Name=jgi.p|Nanoce1779_2|436385|organism=Nannochloropsis oceanica|type=CDS|length=4230bp|location=Sequence derived from alignment at scaffold_9:86177..87777- (Nannochloropsis oceanica)
GTATGGTGAGCGTGTGCCGTACGTGGTCGTCACTGGCCCGCCCGTCACGC
GCCTGACTCCTTCCCTCCCTATGCCCTTCATGACAGAGCTCACCCTCCTC
CGTCCGCCTGTGTCGCCCTTCGTGCCATGGCCTCCGACCCTCGGGCCGTC
CCTCGACCCGCGACCTCTCCGCAGTCAAAGCCTACCTCCTGCGACAGCTG
GCCAAGATCCAGGCCGGCCGTGTGCGTCTACAGGATTTCATTTTTGCCAA
AGAAGTGAAATTGGAGAGGGGAAGGCTTTGGCTCAGGCCGTCACTACCCT
CAATCCTCCGGGTGTGGTGCTGCAATTCGAGAAAGTGTATGCCACCTGTG
TCTTGATCAGTAAGAAACGCTACGTGGGCCAGGCGTTCGAGAAGGAGGAG
GAGGTGGAGGGAGGGGAAGAGGGAGGGAAATGGGGCGGGCGATTTGACGC
CAAAGGCATTGAAGTTGTTAGACGGGACGGGTGTCCGTTGGTGGTTAAGG
TTCAAGAGAAAGCCTTACGCATCCTCTTTGAGGTGGTGTACGGCGACACG
GACTCCCTCTTTGTCTGCTTTCGGGGCCGATCCACAGCACAAGCATTGAG
ATGCCCATGGCAGAGCTCGCTGACGCTATTGTATCGACGGGGAGGAGGAC
ACTGATGCATGCCGTCGAACACGTGCATAAGTCGCCTGTGTGGCAGCCGG
CGCAGGTATGGTGAGCGTGTGCCGTACGTGGTCGTCACTGGCCCGCCCGT
CACGCGCCTGACTCCTTCCCTCCCTATGCCCTTCATGACAGAGCTCACCC
TCCTCCGTCCGCCTGTGTCGCCCTTCGTGCCATGGCCTCCGACCCTCGGG
CCGTCCCTCGACCCGCGACCTCTCCGCAGTCAAAGCCTACCTCCTGCGAC
AGCTGGCCAAGATCCAGGCCGGCCGTGTGCGTCTACAGGATTTCATTTTT
GCCAAAGAAGTGAAATTGGAGAGGGGAAGGCTTTGGCTCAGGCCGTCACT
ACCCTCAATCCTCCGGGTGTGGTGCTGCAATTCGAGAAAGTGTATGCCAC
CTGTGTCTTGATCAGTAAGAAACGCTACGTGGGCCAGGCGTTCGAGAAGG
AGGAGGAGGTGGAGGGAGGGGAAGAGGGAGGGAAATGGGGCGGGCGATTT
GACGCCAAAGGCATTGAAGTTGTTAGACGGGACGGGTGTCCGTTGGTGGT
TAAGGTTCAAGAGAAAGCCTTACGCATCCTCTTTGAGGTGGTGTACGGCG
ACACGGACTCCCTCTTTGTCTGCTTTCGGGGCCGATCCACAGCACAAGCA
TTGAGATGCCCATGGCAGAGCTCGCTGACGCTATTGTATCGACGGGGAGG
AGGACACTGATGCATGCCGTCGAACACGTGCATAAGTCGCCTGTGTGGCA
GCCGGCGCAGGTATGGTGAGCGTGTGCCGTACGTGGTCGTCACTGGCCCG
CCCGTCACGCGCCTGACTCCTTCCCTCCCTATGCCCTTCATGACAGAGCT
CACCCTCCTCCGTCCGCCTGTGTCGCCCTTCGTGCCATGGCCTCCGACCC
TCGGGCCGTCCCTCGACCCGCGACCTCTCCGCAGTCAAAGCCTACCTCCT
GCGACAGCTGGCCAAGATCCAGGCCGGCCGTGTGCGTCTACAGGATTTCA
TTTTTGCCAAAGAAGTGAAATTGGAGAGGGGAAGGCTTTGGCTCAGGCCG
TCACTACCCTCAATCCTCCGGGTGTGGTGCTGCAATTCGAGAAAGTGTAT
GCCACCTGTGTCTTGATCAGTAAGAAACGCTACGTGGGCCAGGCGTTCGA
GAAGGAGGAGGAGGTGGAGGGAGGGGAAGAGGGAGGGAAATGGGGCGGGC
GATTTGACGCCAAAGGCATTGAAGTTGTTAGACGGGACGGGTGTCCGTTG
GTGGTTAAGGTTCAAGAGAAAGCCTTACGCATCCTCTTTGAGGTGGTGTA
CGGCGACACGGACTCCCTCTTTGTCTGCTTTCGGGGCCGATCCACAGCAC
AAGCATTGAGATGCCCATGGCAGAGCTCGCTGACGCTATTGTATCGACGG
GGAGGAGGACACTGATGCATGCCGTCGAACACGTGCATAAGTCGCCTGTG
TGGCAGCCGGCGCAGGTATGGTGAGCGTGTGCCGTACGTGGTCGTCACTG
GCCCGCCCGTCACGCGCCTGACTCCTTCCCTCCCTATGCCCTTCATGACA
GAGCTCACCCTCCTCCGTCCGCCTGTGTCGCCCTTCGTGCCATGGCCTCC
GACCCTCGGGCCGTCCCTCGACCCGCGACCTCTCCGCAGTCAAAGCCTAC
CTCCTGCGACAGCTGGCCAAGATCCAGGCCGGCCGTGTGCGTCTACAGGA
TTTCATTTTTGCCAAAGAAGTGAAATTGGAGAGGGGAAGGCTTTGGCTCA
GGCCGTCACTACCCTCAATCCTCCGGGTGTGGTGCTGCAATTCGAGAAAG
TGTATGCCACCTGTGTCTTGATCAGTAAGAAACGCTACGTGGGCCAGGCG
TTCGAGAAGGAGGAGGAGGTGGAGGGAGGGGAAGAGGGAGGGAAATGGGG
CGGGCGATTTGACGCCAAAGGCATTGAAGTTGTTAGACGGGACGGGTGTC
CGTTGGTGGTTAAGGTTCAAGAGAAAGCCTTACGCATCCTCTTTGAGGTG
GTGTACGGCGACACGGACTCCCTCTTTGTCTGCTTTCGGGGCCGATCCAC
AGCACAAGCATTGAGATGCCCATGGCAGAGCTCGCTGACGCTATTGTATC
GACGGGGAGGAGGACACTGATGCATGCCGTCGAACACGTGCATAAGTCGC
CTGTGTGGCAGCCGGCGCAGGTATGGTGAGCGTGTGCCGTACGTGGTCGT
CACTGGCCCGCCCGTCACGCGCCTGACTCCTTCCCTCCCTATGCCCTTCA
TGACAGAGCTCACCCTCCTCCGTCCGCCTGTGTCGCCCTTCGTGCCATGG
CCTCCGACCCTCGGGCCGTCCCTCGACCCGCGACCTCTCCGCAGTCAAAG
CCTACCTCCTGCGACAGCTGGCCAAGATCCAGGCCGGCCGTGTGCGTCTA
CAGGATTTCATTTTTGCCAAAGAAGTGAAATTGGAGAGGGGAAGGCTTTG
GCTCAGGCCGTCACTACCCTCAATCCTCCGGGTGTGGTGCTGCAATTCGA
GAAAGTGTATGCCACCTGTGTCTTGATCAGTAAGAAACGCTACGTGGGCC
AGGCGTTCGAGAAGGAGGAGGAGGTGGAGGGAGGGGAAGAGGGAGGGAAA
TGGGGCGGGCGATTTGACGCCAAAGGCATTGAAGTTGTTAGACGGGACGG
GTGTCCGTTGGTGGTTAAGGTTCAAGAGAAAGCCTTACGCATCCTCTTTG
AGGTGGTGTACGGCGACACGGACTCCCTCTTTGTCTGCTTTCGGGGCCGA
TCCACAGCACAAGCATTGAGATGCCCATGGCAGAGCTCGCTGACGCTATT
GTATCGACGGGGAGGAGGACACTGATGCATGCCGTCGAACACGTGCATAA
GTCGCCTGTGTGGCAGCCGGCGCAGGTATGGTGAGCGTGTGCCGTACGTG
GTCGTCACTGGCCCGCCCGTCACGCGCCTGACTCCTTCCCTCCCTATGCC
CTTCATGACAGAGCTCACCCTCCTCCGTCCGCCTGTGTCGCCCTTCGTGC
CATGGCCTCCGACCCTCGGGCCGTCCCTCGACCCGCGACCTCTCCGCAGT
CAAAGCCTACCTCCTGCGACAGCTGGCCAAGATCCAGGCCGGCCGTGTGC
GTCTACAGGATTTCATTTTTGCCAAAGAAGTGAAATTGGAGAGGGGAAGG
CTTTGGCTCAGGCCGTCACTACCCTCAATCCTCCGGGTGTGGTGCTGCAA
TTCGAGAAAGTGTATGCCACCTGTGTCTTGATCAGTAAGAAACGCTACGT
GGGCCAGGCGTTCGAGAAGGAGGAGGAGGTGGAGGGAGGGGAAGAGGGAG
GGAAATGGGGCGGGCGATTTGACGCCAAAGGCATTGAAGTTGTTAGACGG
GACGGGTGTCCGTTGGTGGTTAAGGTTCAAGAGAAAGCCTTACGCATCCT
CTTTGAGGTGGTGTACGGCGACACGGACTCCCTCTTTGTCTGCTTTCGGG
GCCGATCCACAGCACAAGCATTGAGATGCCCATGGCAGAGCTCGCTGACG
CTATTGTATCGACGGGGAGGAGGACACTGATGCATGCCGTCGAACACGTG
CATAAGTCGCCTGTGTGGCAGCCGGCGCAG back to top
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