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Properties
Property Name | Value |
TranscriptId | 435500 |
Track | FilteredModels2 |
ProteinId | 435414 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_9 | supercontig | scaffold_9:12927..14981 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4566 ID=mRNA_4566|Name=jgi.p|Nanoce1779_2|435414|organism=Nannochloropsis oceanica|type=mRNA|length=566bp GGTAGACTTGCCAACTGGAATAAAAACGATATGTATAGCCTACCTTCTAA ACCTTCTACTCAAAGCAACATGACCCACACGCCCACCGCTATCGCCACCC ACATCGAGGAGAGCCATGTTATCCCCGCACCCATCACGGACGTGTGGTCG GTCATTAAGAGCATGAAGATGGAGACGTGGTGGAGCTTGCTCGACAAGGT CACATCCGACTCTTCTGCGCCCGGTCTGTCCATCGGGAGCACCTACACGC TGCACTTTAAGGACGGTACGGCATGGGGCATTGTGATCATGGAGGCCAGC GAGCTGCATAAGTCTGTGTCCTTCGAGCTGGTGAGCAGCAATCCCAGCAT TTCTGTATCCTCGGCCCTCCACAAGCTTAGCTGCAAGCCCGTCACTGCCA CGAACCAGAGCTTCATCTCCTGGTCCACAGATTTCAGCAACGACGCCTCC GCCGACACCGTCCTTGACTCTCGCTTCAAGAAGCGCGAAGGACTCCAAGG ACTGCATGACCACTTCGCTACCAATAAGTAGAGGGAGGGAGGAAGAGAGA GCCAAGAACTTTAGGG back to topprotein sequence of jgi.p|Nanoce1779_2|435414 >mRNA_4566-protein ID=mRNA_4566-protein|Name=jgi.p|Nanoce1779_2|435414|organism=Nannochloropsis oceanica|type=polypeptide|length=167bp MYSLPSKPSTQSNMTHTPTAIATHIEESHVIPAPITDVWSVIKSMKMETW WSLLDKVTSDSSAPGLSIGSTYTLHFKDGTAWGIVIMEASELHKSVSFEL VSSNPSISVSSALHKLSCKPVTATNQSFISWSTDFSNDASADTVLDSRFK KREGLQGLHDHFATNK* back to topmRNA from alignment at scaffold_9:12927..14981+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4566 ID=mRNA_4566|Name=jgi.p|Nanoce1779_2|435414|organism=Nannochloropsis oceanica|type=mRNA|length=2055bp|location=Sequence derived from alignment at scaffold_9:12927..14981+ (Nannochloropsis oceanica) GGTAGACTTGCCAACTGGAATAAAAACGATATGTATAGGTGCGTGTGTAC
GATGCGGCATGATTTGGCAATAGCGCAGCAGGGACATACGCCCTAAACCC
AGACCGCAGCAGGAAAGCACGTCACTCAGTCTCCCTCCTCCCTTGTCTCC
GCCTCGTACTACTGCTGCTGCGCTGGCCGGTTTCCCATGCCATCTGGGCG
GCGGCACTGCTTTTCTCACGGTTGCGGGAGTGCTTTTCTCACACCACTCG
CTCCTCCCGCTACACGTTACAGCCTACCTTCTAAACCTTCTACTCAAAGC
AACATGACCCACACGCCCACCGCTATCGCCACCCACATCGAGGAGAGCCA
TGTTATCCCCGCACCCATCACGGACGGTAAGTGAGGCCAGGAGGGAGGGA
GGGAGGGAGGGAAGGAGGGAGGGAGAGAGGGAGGGAGGTAATTGGGGTCT
TTCACTTCTGCCTCGCCTTACATCGATCTCCCAAGAGAATCAGTTCAACA
ACCAACCAGCGCTACCTAACCTCCGTACTCTCTTCCTTCCTATGTCCTAA
TTAAAGTGTGGTCGGTCATTAAGAGCATGAAGATGGAGACGTGGTGGAGC
TTGCTCGACAAGGTGGGGGAGGGAGGGGGGGGAGGGAGGGAGACAGGGAG
GCAGCATGCTTTCATTCATTTGTTCAACCGACATTATACACCATTCCCCT
CCGTCCTTTCTTTCCTCTTTCCCTCCCTCCCGCCCTCCCTTCCTCCCCAA
GGTCACATCCGACTCTTCTGCGCCCGGTCTGTCCATCGGGAGCACCTACA
CGCTGCACTTTAAGGACGGTACGGCATGGGGCATTGTGATCATGGAGGCC
AGCGAGCTGCATAAGTGAGTACGAGAGGGAGGGAGGGAAGGCGACAATGG
ATTGTCAGGAGCCTCATGCCTATTGTCTAATCGACAGTCACTCGACCACC
TGCCCACGTACGCTTCCCTCACTCCCTCCCTCCCTCCCTCTCTCCCTCTC
CAGGTCTGTGTCCTTCGAGCTGGTGAGCAGCAATCCCAGCATTTCTGTAT
CCTCGGCCCTCCACAAGCTTAGCTGCAAGGTAGGGACGAGGAAAGGAGGG
ACAAAAGGAAGAGAAGGGGGCAGGGAGGCAGGGAGGGAGGGAGGGAGGAA
CAGAAGGTGGGAGAAGCTTTGTCAGAGAGAGTAACCACCCCTGCGTCTCT
ATGGTAGTGACCCTGCGCAAGTGTCACCCATCGCCCCCATCCACCTTGCC
ATGATGAGAAGGAGAGCGGGGGAGGGGGAGGAGGGGGAGGAGAAAGAGCG
AAAGGGGGTCGGGGAGGATGAGCTGGGGCAATGACAGTCGTAGGCGCCAT
AATTTTCTCTCCTCGACTCAACAAAGAAATTTTAACCACTCCCCTCCCTC
CCTCCCTCCCTTCCTCCCTCCTCCCTCAGCCCGTCACTGCCACGAACCAG
AGCTTCATCTCCTGGTCCACAGATTTCAGCAACGACGCCTCCGCCGACAC
CGTCCTTGACTCTCGCTTCAAGAAGCGTGAGTCTGTTCACACCTTCCCCC
CCTCCCTCCCTCCCCTGTTCCTTCCCTCCTTCCTTCCCTCCTTTCTTTCT
TCCATCCCTTCCTCCCTCTTCTTCACGGATGATGATGCTCCCATTTCGTT
TGAGAGAAAGGTACCACGACGCGAAGCACTCATCCCTCCCTCCCTCCCTC
CCTCAGGCGAAGGACTCCAAGGACTGCATGACCACTTCGCTACCAATAAG
TAGAGGGAGGGAGGAAGAGAGAGCGGGAGGGACAGAGGGAGGGATAGAGG
GAGGGAGGGAGAGAGGGAGGAATAGAGGCCAAGAACTTTAGGGAGAGAGG
GAGGGAGGGAGGGATAGAAAGAGGGATAGAGGGAGGGACAGAGGGAGGGA
TAGAGGGAGGGAGGGAGGGATGGAGGAATAGAGGCCAAGAACTTTAGGGA
GAGAGGGAGGGAGGGAGGGATGGAAGGAGGGATAGAGGGAGGGACAGAGG
GAGGGATAGAGGGAGGGAGGGAGGGATGGAGGAATAGAGGCCAAGAACTT
TAGGG back to topCoding sequence (CDS) from alignment at scaffold_9:12927..14981+ >mRNA_4566 ID=mRNA_4566|Name=jgi.p|Nanoce1779_2|435414|organism=Nannochloropsis oceanica|type=CDS|length=3507bp|location=Sequence derived from alignment at scaffold_9:12927..14981+ (Nannochloropsis oceanica) ATGTATAGCCTACCTTCTAAACCTTCTACTCAAAGCAACATGACCCACAC GCCCACCGCTATCGCCACCCACATCGAGGAGAGCCATGTTATCCCCGCAC CCATCACGGACGTGTGGTCGGTCATTAAGAGCATGAAGATGGAGACGTGG TGGAGCTTGCTCGACAAGGTCACATCCGACTCTTCTGCGCCCGGTCTGTC CATCGGGAGCACCTACACGCTGCACTTTAAGGACGGTACGGCATGGGGCA TTGTGATCATGGAGGCCAGCGAGCTGCATAAGTCTGTGTCCTTCGAGCTG GTGAGCAGCAATCCCAGCATTTCTGTATCCTCGGCCCTCCACAAGCTTAG CTGCAAGCCCGTCACTGCCACGAACCAGAGCTTCATCTCCTGGTCCACAG ATTTCAGCAACGACGCCTCCGCCGACACCGTCCTTGACTCTCGCTTCAAG AAGCGCGAAGGACTCCAAGGACTGCATGACCACTTCGCTACCAATAAGTA GATGTATAGCCTACCTTCTAAACCTTCTACTCAAAGCAACATGACCCACA CGCCCACCGCTATCGCCACCCACATCGAGGAGAGCCATGTTATCCCCGCA CCCATCACGGACGTGTGGTCGGTCATTAAGAGCATGAAGATGGAGACGTG GTGGAGCTTGCTCGACAAGGTCACATCCGACTCTTCTGCGCCCGGTCTGT CCATCGGGAGCACCTACACGCTGCACTTTAAGGACGGTACGGCATGGGGC ATTGTGATCATGGAGGCCAGCGAGCTGCATAAGTCTGTGTCCTTCGAGCT GGTGAGCAGCAATCCCAGCATTTCTGTATCCTCGGCCCTCCACAAGCTTA GCTGCAAGCCCGTCACTGCCACGAACCAGAGCTTCATCTCCTGGTCCACA GATTTCAGCAACGACGCCTCCGCCGACACCGTCCTTGACTCTCGCTTCAA GAAGCGCGAAGGACTCCAAGGACTGCATGACCACTTCGCTACCAATAAGT AGATGTATAGCCTACCTTCTAAACCTTCTACTCAAAGCAACATGACCCAC ACGCCCACCGCTATCGCCACCCACATCGAGGAGAGCCATGTTATCCCCGC ACCCATCACGGACGTGTGGTCGGTCATTAAGAGCATGAAGATGGAGACGT GGTGGAGCTTGCTCGACAAGGTCACATCCGACTCTTCTGCGCCCGGTCTG TCCATCGGGAGCACCTACACGCTGCACTTTAAGGACGGTACGGCATGGGG CATTGTGATCATGGAGGCCAGCGAGCTGCATAAGTCTGTGTCCTTCGAGC TGGTGAGCAGCAATCCCAGCATTTCTGTATCCTCGGCCCTCCACAAGCTT AGCTGCAAGCCCGTCACTGCCACGAACCAGAGCTTCATCTCCTGGTCCAC AGATTTCAGCAACGACGCCTCCGCCGACACCGTCCTTGACTCTCGCTTCA AGAAGCGCGAAGGACTCCAAGGACTGCATGACCACTTCGCTACCAATAAG TAGATGTATAGCCTACCTTCTAAACCTTCTACTCAAAGCAACATGACCCA CACGCCCACCGCTATCGCCACCCACATCGAGGAGAGCCATGTTATCCCCG CACCCATCACGGACGTGTGGTCGGTCATTAAGAGCATGAAGATGGAGACG TGGTGGAGCTTGCTCGACAAGGTCACATCCGACTCTTCTGCGCCCGGTCT GTCCATCGGGAGCACCTACACGCTGCACTTTAAGGACGGTACGGCATGGG GCATTGTGATCATGGAGGCCAGCGAGCTGCATAAGTCTGTGTCCTTCGAG CTGGTGAGCAGCAATCCCAGCATTTCTGTATCCTCGGCCCTCCACAAGCT TAGCTGCAAGCCCGTCACTGCCACGAACCAGAGCTTCATCTCCTGGTCCA CAGATTTCAGCAACGACGCCTCCGCCGACACCGTCCTTGACTCTCGCTTC AAGAAGCGCGAAGGACTCCAAGGACTGCATGACCACTTCGCTACCAATAA GTAGATGTATAGCCTACCTTCTAAACCTTCTACTCAAAGCAACATGACCC ACACGCCCACCGCTATCGCCACCCACATCGAGGAGAGCCATGTTATCCCC GCACCCATCACGGACGTGTGGTCGGTCATTAAGAGCATGAAGATGGAGAC GTGGTGGAGCTTGCTCGACAAGGTCACATCCGACTCTTCTGCGCCCGGTC TGTCCATCGGGAGCACCTACACGCTGCACTTTAAGGACGGTACGGCATGG GGCATTGTGATCATGGAGGCCAGCGAGCTGCATAAGTCTGTGTCCTTCGA GCTGGTGAGCAGCAATCCCAGCATTTCTGTATCCTCGGCCCTCCACAAGC TTAGCTGCAAGCCCGTCACTGCCACGAACCAGAGCTTCATCTCCTGGTCC ACAGATTTCAGCAACGACGCCTCCGCCGACACCGTCCTTGACTCTCGCTT CAAGAAGCGCGAAGGACTCCAAGGACTGCATGACCACTTCGCTACCAATA AGTAGATGTATAGCCTACCTTCTAAACCTTCTACTCAAAGCAACATGACC CACACGCCCACCGCTATCGCCACCCACATCGAGGAGAGCCATGTTATCCC CGCACCCATCACGGACGTGTGGTCGGTCATTAAGAGCATGAAGATGGAGA CGTGGTGGAGCTTGCTCGACAAGGTCACATCCGACTCTTCTGCGCCCGGT CTGTCCATCGGGAGCACCTACACGCTGCACTTTAAGGACGGTACGGCATG GGGCATTGTGATCATGGAGGCCAGCGAGCTGCATAAGTCTGTGTCCTTCG AGCTGGTGAGCAGCAATCCCAGCATTTCTGTATCCTCGGCCCTCCACAAG CTTAGCTGCAAGCCCGTCACTGCCACGAACCAGAGCTTCATCTCCTGGTC CACAGATTTCAGCAACGACGCCTCCGCCGACACCGTCCTTGACTCTCGCT TCAAGAAGCGCGAAGGACTCCAAGGACTGCATGACCACTTCGCTACCAAT AAGTAGATGTATAGCCTACCTTCTAAACCTTCTACTCAAAGCAACATGAC CCACACGCCCACCGCTATCGCCACCCACATCGAGGAGAGCCATGTTATCC CCGCACCCATCACGGACGTGTGGTCGGTCATTAAGAGCATGAAGATGGAG ACGTGGTGGAGCTTGCTCGACAAGGTCACATCCGACTCTTCTGCGCCCGG TCTGTCCATCGGGAGCACCTACACGCTGCACTTTAAGGACGGTACGGCAT GGGGCATTGTGATCATGGAGGCCAGCGAGCTGCATAAGTCTGTGTCCTTC GAGCTGGTGAGCAGCAATCCCAGCATTTCTGTATCCTCGGCCCTCCACAA GCTTAGCTGCAAGCCCGTCACTGCCACGAACCAGAGCTTCATCTCCTGGT CCACAGATTTCAGCAACGACGCCTCCGCCGACACCGTCCTTGACTCTCGC TTCAAGAAGCGCGAAGGACTCCAAGGACTGCATGACCACTTCGCTACCAA TAAGTAG back to top
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