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Properties
| Property Name | Value |
|---|
| TranscriptId | 435550 |
| Track | FilteredModels2 |
| ProteinId | 435464 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_9 | supercontig | scaffold_9:8255..9441 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4564 ID=mRNA_4564|Name=jgi.p|Nanoce1779_2|435464|organism=Nannochloropsis oceanica|type=mRNA|length=988bp
CAGCGTTTGCCCTTGTCCGACACTACAACCTCCTCCTCCTTTTCCTCCTT
TTCCTCCTCCTCCTCCTTTTCCTCCTCCTCCTCCTCCTCCTCCTTTTCCT
CCTCCCTTTCCTCCTCTAACACCACCACCTCCTACTACTACTCTATCTCC
CCCTCCTCCACCACCTCCTTCTGTTCGTCCGGTATGTCTTTTCATACGTC
TCCCAGCGATATGACCAGTTTTGTTGCTGCTGCTGTTACAGCTGTTGCTA
CTTGCACTCTTGCAGCTGCCATTATTACCCATCCCTCCCCCTCCGATTCC
ACTCTCGGTATTTTGACGAGGTATATTGCTACAGCCCAGCGTCTCACCTC
GGTACACCTCACCAGTCGTTCCACCGCCCCAACACCATCTACCTCCCCTG
CTCCAGTACATTCCGCTTCTCCGTTACCGTCTTGCCCTTCCTCCTCATCA
TCCTCCTTATCCCCCTTTCTGCCTTGCTGGCCCACCATCCAGACCGTCAC
CGCCTGTCTCCGATCTCAGCTTGCCTGCGATCATCCCTCCATCACTCTCT
GTCAACGCCAGGCCCTCCTCCTCATGCAGCGTGAAGCCGTCGCGTCATCC
CTTACCGCCTACCCCCGTTTGCTCCAGCAATTCACCGCATGGGGCCTCGA
CGAGGCGGACCTTTGGACCTGCCTGACCTACATCCTAGAACTAGCCCCCC
TTGTCATCCACATCAAGCTTGGTGAGATCTTGCCGAAACTCGTGGAAGGC
ATCCACTATCGGAATCAGTTTGAGACCGGCACTTCCTCTGGGAAGCTCTG
CAGCACCAGTCGCACGACATGGGAGGACATGCTCTTCCACGAGGCATACC
AGGAGGCCAAGGCGCACGAGCGGCTCAAGTACGGGGTATGAGCATTTACA
ACGCGCAGACCTGCGTCCATGCGGCGGTGCAATACGGCAAGTCCTACTTC
GAGCTAACGTACGCCACCCGTTTTCCGTGCCACATTCA back to topprotein sequence of jgi.p|Nanoce1779_2|435464 >mRNA_4564-protein ID=mRNA_4564-protein|Name=jgi.p|Nanoce1779_2|435464|organism=Nannochloropsis oceanica|type=polypeptide|length=236bp
MSFHTSPSDMTSFVAAAVTAVATCTLAAAIITHPSPSDSTLGILTRYIAT
AQRLTSVHLTSRSTAPTPSTSPAPVHSASPLPSCPSSSSSSLSPFLPCWP
TIQTVTACLRSQLACDHPSITLCQRQALLLMQREAVASSLTAYPRLLQQF
TAWGLDEADLWTCLTYILELAPLVIHIKLGEILPKLVEGIHYRNQFETGT
SSGKLCSTSRTTWEDMLFHEAYQEAKAHERLKYGV* back to topmRNA from alignment at scaffold_9:8255..9441- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4564 ID=mRNA_4564|Name=jgi.p|Nanoce1779_2|435464|organism=Nannochloropsis oceanica|type=mRNA|length=1187bp|location=Sequence derived from alignment at scaffold_9:8255..9441- (Nannochloropsis oceanica)
CAGCGTTTGCCCTTGTCCGACACTACAACCTCCTCCTCCTTTTCCTCCTT
TTCCTCCTCCTCCTCCTTTTCCTCCTCCTCCTCCTCCTCCTCCTTTTCCT
CCTCCCTTTCCTCCTCTAACACCACCACCTCCTACTACTACTCTATCTCC
CCCTCCTCCACCACCTCCTTCTGTTCGTCCGGTATGTCTTTTCATACGTC
TCCCAGCGATATGACCAGTTTTGTTGCTGCTGCTGTTACAGCTGTTGCTA
CTTGCACTCTTGCAGCTGCCATTATTACCCATCCCTCCCCCTCCGATTCC
ACTCTCGGTATTTTGACGAGGTATATTGCTACAGCCCAGCGTCTCACCTC
GGTACACCTCACCAGTCGTTCCACCGCCCCAACACCATCTACCTCCCCTG
CTCCAGTACATTCCGCTTCTCCGTTACCGTCTTGCCCTTCCTCCTCATCA
TCCTCCTTATCCCCCTTTCTGCCTTGCTGGCCCACCATCCAGACCGTCAC
CGCCTGTCTCCGATCTCAGCTTGCCTGCGATCATCCCTCCATCACTCTCT
GTCAACGCCAGGCCCTCCTCCTCATGCAGCGTGAAGCCGTCGCGTCATCC
CTTACCGCCTACCCCCGTTTGCTCCAGCAATTCACCGCATGGGGCCTCGA
CGAGGCGGACCTTTGGACCTGCCTGACCTACATCCTAGAACTAGCCCCCC
TTGTCATCCACATCAAGCTTGGTGAGATCTTGCCGAAACTCGTGGAAGGC
ATCCACTATCGGAATCAGGTAGGGAAGGAGGAAAGGAGGGAGTGAAGGGG
GACGAGGGACGGAGAACCGGAGAGAAAGGAGGAGGTAGGGATGGATGGAG
GCTGGGAGGGGAGAGCAATGTTATCAACTTACTAAATTTTCCGTGTCATT
GTGAACCTTGACACTCCATCTCCCCATCCCCTCGATCCTCCCCCCTCTCC
TCCTTCCCCGCCCTTAGTTTGAGACCGGCACTTCCTCTGGGAAGCTCTGC
AGCACCAGTCGCACGACATGGGAGGACATGCTCTTCCACGAGGCATACCA
GGAGGCCAAGGCGCACGAGCGGCTCAAGTACGGGGTATGAGCATTTACAA
CGCGCAGACCTGCGTCCATGCGGCGGTGCAATACGGCAAGTCCTACTTCG
AGCTAACGTACGCCACCCGTTTTCCGTGCCACATTCA back to topCoding sequence (CDS) from alignment at scaffold_9:8255..9441- >mRNA_4564 ID=mRNA_4564|Name=jgi.p|Nanoce1779_2|435464|organism=Nannochloropsis oceanica|type=CDS|length=1416bp|location=Sequence derived from alignment at scaffold_9:8255..9441- (Nannochloropsis oceanica)
TTTGAGACCGGCACTTCCTCTGGGAAGCTCTGCAGCACCAGTCGCACGAC
ATGGGAGGACATGCTCTTCCACGAGGCATACCAGGAGGCCAAGGCGCACG
AGCGGCTCAAGTACGGGGTATGAATGTCTTTTCATACGTCTCCCAGCGAT
ATGACCAGTTTTGTTGCTGCTGCTGTTACAGCTGTTGCTACTTGCACTCT
TGCAGCTGCCATTATTACCCATCCCTCCCCCTCCGATTCCACTCTCGGTA
TTTTGACGAGGTATATTGCTACAGCCCAGCGTCTCACCTCGGTACACCTC
ACCAGTCGTTCCACCGCCCCAACACCATCTACCTCCCCTGCTCCAGTACA
TTCCGCTTCTCCGTTACCGTCTTGCCCTTCCTCCTCATCATCCTCCTTAT
CCCCCTTTCTGCCTTGCTGGCCCACCATCCAGACCGTCACCGCCTGTCTC
CGATCTCAGCTTGCCTGCGATCATCCCTCCATCACTCTCTGTCAACGCCA
GGCCCTCCTCCTCATGCAGCGTGAAGCCGTCGCGTCATCCCTTACCGCCT
ACCCCCGTTTGCTCCAGCAATTCACCGCATGGGGCCTCGACGAGGCGGAC
CTTTGGACCTGCCTGACCTACATCCTAGAACTAGCCCCCCTTGTCATCCA
CATCAAGCTTGGTGAGATCTTGCCGAAACTCGTGGAAGGCATCCACTATC
GGAATCAGTTTGAGACCGGCACTTCCTCTGGGAAGCTCTGCAGCACCAGT
CGCACGACATGGGAGGACATGCTCTTCCACGAGGCATACCAGGAGGCCAA
GGCGCACGAGCGGCTCAAGTACGGGGTATGAATGTCTTTTCATACGTCTC
CCAGCGATATGACCAGTTTTGTTGCTGCTGCTGTTACAGCTGTTGCTACT
TGCACTCTTGCAGCTGCCATTATTACCCATCCCTCCCCCTCCGATTCCAC
TCTCGGTATTTTGACGAGGTATATTGCTACAGCCCAGCGTCTCACCTCGG
TACACCTCACCAGTCGTTCCACCGCCCCAACACCATCTACCTCCCCTGCT
CCAGTACATTCCGCTTCTCCGTTACCGTCTTGCCCTTCCTCCTCATCATC
CTCCTTATCCCCCTTTCTGCCTTGCTGGCCCACCATCCAGACCGTCACCG
CCTGTCTCCGATCTCAGCTTGCCTGCGATCATCCCTCCATCACTCTCTGT
CAACGCCAGGCCCTCCTCCTCATGCAGCGTGAAGCCGTCGCGTCATCCCT
TACCGCCTACCCCCGTTTGCTCCAGCAATTCACCGCATGGGGCCTCGACG
AGGCGGACCTTTGGACCTGCCTGACCTACATCCTAGAACTAGCCCCCCTT
GTCATCCACATCAAGCTTGGTGAGATCTTGCCGAAACTCGTGGAAGGCAT
CCACTATCGGAATCAG back to top
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