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Properties
| Property Name | Value |
|---|
| TranscriptId | 589668 |
| Track | FilteredModels2 |
| ProteinId | 589582 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:941115..942760 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4559 ID=mRNA_4559|Name=jgi.p|Nanoce1779_2|589582|organism=Nannochloropsis oceanica|type=mRNA|length=1505bp
CTGCTGCTGCTGCTGCTGCTGCTCGCCCCATCCGACAGCCCCTCCAGCAC
CGCAATGACGGACAAACACTTACTCAGGGCGTCCCACAGAGACGCCAGAT
TTATCTGACGCAGTAAATGCTCGCTCCCTACAGCTGAGGACGAGGACGAG
GGCTGGAGGGAGGAAATGGGACTGTTCGCAACAGCAGGAGGAGTAGCTTC
AGGTTTGGACTCTGCTACTCCTACTCCTCGTGCTGAATCAGCCATAGGGG
CGTCCTGCTCTTCCTCTTCCTCGTCCTCATCCTCCTCCCCCTCCTCTTTC
TCCTTCCTCGGGACCCCCTTCTCGGCCAAGGCCATGATCGTCTGCAGCAC
CCGGAGTAGTTTGATTTCACTGCTCTTGGCCGACAAGGTCACCACCGACG
CAGGAATGCTCCTCTTCCGCTTCTCCGTTCTCGTCTTCGTCTTCTCCTCC
TTCTCCTTGCCCTCGTCCTCGCCATCCTCCGGGTCATGGACGTCGAGCAG
ACCAGACAGGGCGTGATGGAGGGATCCGAGCTCATCGAGAGCAGTGGCAC
CTAACCCGCCAGCCACCGACAGCAGCTCCTGAAGCAAATGCATCCTGTTC
GCCGGCACCCTGGAGAGAGCCCCTGCTATCTTGTTCACGCGGTAGCACGT
GGTGTCGCTGCATGTCTCTTCCAAAAACACCCCGCATAACCGTTGCAGGC
GCCTAGGCCCCAGGATGAGCCCGGGCACCTCCACAGTGGCAAAGAGAGAG
GACGGCTGGCCTTTTGGCTCCGCTGCTGCTCCTGCTGCTCCTGCTGCTGG
TGCTCCGGCGGCGGTGGCCGCGTCTGAAGAAGCTGGGCCCCCATCTGCCT
TGGCTTCTGCACGAGAAGCAGAGAGAGAAGGAGATGAAGTAGGAGCAGGA
GCAGCAGCAGCAGCGGTGTCATTCTGGGTGTTCTTGACGTCGGCCTTGGC
ATCTGCGCCTCCCTCCTCCCCTTCCTCCCTCTTCGCGGCCGCCGCTGCTT
CTGCTTCTGAATTCTCCACTGCAGTCGCCACAGCTTTTGCTGCCGCTGCA
TCTTCCTCTTCTTTCTTCTTCTTGCGTTCCTTCTCCTTCTTCCTCTCCTC
CTTCTTCTTCTTTCGAAGTTTCTCTTCCGGCGTCAGGTAGGAGGCCAGGG
TGGTGACGAGGACAGTCTCTAGGAGGGTCAAGACCCCATCCAATCGGGCC
GTCGAGGCCGTGTAATGAGGCGCCGCCAAAAGATCCACCACATTCTCAAT
CAACGACGAGGACGAGGACGAGGGAGGGGTATCGACGTCCATCTTGCTGT
CCCCCTCTACTTCCACCTCTTCCTCCTTCGCGCCCTCCCCCTGAGTCACC
ATGTCCACACGCACCCTCGGGCTAGTCTGACACAAAAACAGAAGCAAATC
GGCGATATGCCTCGCAGCCTGCATCGGCACCTCCCTCCCTCCCTGCCTCC
CTCCCTCCCCCATAGCCACAGACGACGACGACGCCGCCAGCATATCTGAG
ACTGG back to topprotein sequence of jgi.p|Nanoce1779_2|589582 >mRNA_4559-protein ID=mRNA_4559-protein|Name=jgi.p|Nanoce1779_2|589582|organism=Nannochloropsis oceanica|type=polypeptide|length=142bp
MSPGTSTVAKREDGWPFGSAAAPAAPAAGAPAAVAASEEAGPPSALASAR
EAEREGDEVGAGAAAAAVSFWVFLTSALASAPPSSPSSLFAAAAASASEF
STAVATAFAAAASSSSFFFLRSFSFFLSSFFFFRSFSSGVR* back to topmRNA from alignment at scaffold_10:941115..942760+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4559 ID=mRNA_4559|Name=jgi.p|Nanoce1779_2|589582|organism=Nannochloropsis oceanica|type=mRNA|length=1646bp|location=Sequence derived from alignment at scaffold_10:941115..942760+ (Nannochloropsis oceanica)
CTGCTGCTGCTGCTGCTGCTGCTCGCCCCATCCGACAGCCCCTCCAGCAC
CGCAATGACGGACAAACACTTACTCAGGGCGTCCCACAGAGACGCCAGAT
TTATCTGACGCAGTAAATGCTCGCTCCCTACAGCTGAGGACGAGGACGAG
GGCTGGAGGGAGGAAATGGGACTGTTCGCAACAGCAGGAGGAGTAGCTTC
AGGTTTGGACTCTGCTACTCCTACTCCTCGTGCTGAATCAGCCATAGGGG
CGTCCTGCTCTTCCTCTTCCTCGTCCTCATCCTCCTCCCCCTCCTCTTTC
TCCTTCCTCGGGACCCCCTTCTCGGCCAAGGCCATGATCGTCTGCAGCAC
CCGGAGTAGTTTGATTTCACTGCTCTTGGCCGACAAGGTCACCACCGACG
CAGGAATGCTCCTCTTCCGCTTCTCCGTTCTCGTCTTCGTCTTCTCCTCC
TTCTCCTTGCCCTCGTCCTCGCCATCCTCCGGGTCATGGACGTCGAGCAG
ACCAGACAGGGCGTGATGGAGGGATCCGAGCTCATCGAGAGCAGTGGCAC
CTAACCCGCCAGCCACCGACAGCAGCTCCTGAGGGGAAAAGGAAGGAGGG
AGGGAGGGCAAGAGAGGGGAAGGTGTGAGGGGGGGGAGCTCAGAGAGAGA
CTGGTGCAAAGGCAAGGAGGACGGGGGGGGGAAAGGTAGAGAAAAAGGGG
GGGAGGGAATGGGGCGCACCTGAAGCAAATGCATCCTGTTCGCCGGCACC
CTGGAGAGAGCCCCTGCTATCTTGTTCACGCGGTAGCACGTGGTGTCGCT
GCATGTCTCTTCCAAAAACACCCCGCATAACCGTTGCAGGCGCCTAGGCC
CCAGGATGAGCCCGGGCACCTCCACAGTGGCAAAGAGAGAGGACGGCTGG
CCTTTTGGCTCCGCTGCTGCTCCTGCTGCTCCTGCTGCTGGTGCTCCGGC
GGCGGTGGCCGCGTCTGAAGAAGCTGGGCCCCCATCTGCCTTGGCTTCTG
CACGAGAAGCAGAGAGAGAAGGAGATGAAGTAGGAGCAGGAGCAGCAGCA
GCAGCGGTGTCATTCTGGGTGTTCTTGACGTCGGCCTTGGCATCTGCGCC
TCCCTCCTCCCCTTCCTCCCTCTTCGCGGCCGCCGCTGCTTCTGCTTCTG
AATTCTCCACTGCAGTCGCCACAGCTTTTGCTGCCGCTGCATCTTCCTCT
TCTTTCTTCTTCTTGCGTTCCTTCTCCTTCTTCCTCTCCTCCTTCTTCTT
CTTTCGAAGTTTCTCTTCCGGCGTCAGGTAGGAGGCCAGGGTGGTGACGA
GGACAGTCTCTAGGAGGGTCAAGACCCCATCCAATCGGGCCGTCGAGGCC
GTGTAATGAGGCGCCGCCAAAAGATCCACCACATTCTCAATCAACGACGA
GGACGAGGACGAGGGAGGGGTATCGACGTCCATCTTGCTGTCCCCCTCTA
CTTCCACCTCTTCCTCCTTCGCGCCCTCCCCCTGAGTCACCATGTCCACA
CGCACCCTCGGGCTAGTCTGACACAAAAACAGAAGCAAATCGGCGATATG
CCTCGCAGCCTGCATCGGCACCTCCCTCCCTCCCTGCCTCCCTCCCTCCC
CCATAGCCACAGACGACGACGACGCCGCCAGCATATCTGAGACTGG back to topCoding sequence (CDS) from alignment at scaffold_10:941115..942760+ >mRNA_4559 ID=mRNA_4559|Name=jgi.p|Nanoce1779_2|589582|organism=Nannochloropsis oceanica|type=CDS|length=426bp|location=Sequence derived from alignment at scaffold_10:941115..942760+ (Nannochloropsis oceanica)
ATGAGCCCGGGCACCTCCACAGTGGCAAAGAGAGAGGACGGCTGGCCTTT
TGGCTCCGCTGCTGCTCCTGCTGCTCCTGCTGCTGGTGCTCCGGCGGCGG
TGGCCGCGTCTGAAGAAGCTGGGCCCCCATCTGCCTTGGCTTCTGCACGA
GAAGCAGAGAGAGAAGGAGATGAAGTAGGAGCAGGAGCAGCAGCAGCAGC
GGTGTCATTCTGGGTGTTCTTGACGTCGGCCTTGGCATCTGCGCCTCCCT
CCTCCCCTTCCTCCCTCTTCGCGGCCGCCGCTGCTTCTGCTTCTGAATTC
TCCACTGCAGTCGCCACAGCTTTTGCTGCCGCTGCATCTTCCTCTTCTTT
CTTCTTCTTGCGTTCCTTCTCCTTCTTCCTCTCCTCCTTCTTCTTCTTTC
GAAGTTTCTCTTCCGGCGTCAGGTAG back to top
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