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Properties
| Property Name | Value |
|---|
| TranscriptId | 589660 |
| Track | FilteredModels2 |
| ProteinId | 589574 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:928147..930179 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4554 ID=mRNA_4554|Name=jgi.p|Nanoce1779_2|589574|organism=Nannochloropsis oceanica|type=mRNA|length=954bp
ACAGGACCCGCCGACTTTCAACCCAGCAAGACACACACAGTAACCATGCG
TGTTTGCAGCACCTTCGGTAAGTTTTGGGGGTGGTGGTTGTTGAAAGAGG
AATGCCCTTACTCGGCCGACGGAAGCGGCCAGGCCATCGTGACCCTCTCT
TCAGTTCATTGCCACCAAGTCGCGACAACCACACCTTCCCCTTTCACCTT
CACTTCCACAGGCACTTTTATATACGCCGGCTCCACTGTCCTCGCGACCT
GGGCCCTCCTTACCCTGGCCTGGTCTACCTCTAGTGAACCGACGCTGACC
GTGGACGGAATGCCCACCTCCGTCTTCATGCGCATGGGTCCTTTCGGTAT
GAAGGCTCGAGTCAGTCAGGCGGGCGCGCCCCTGTACACGGCCGACGCTT
TTCACTGGTGCTCTCGCACGGACCCCGGGCCCATATTCGACGAGCCCACG
CACCAATTTGCCTACTGCACTTTTCTGACCGCCACACAGATTTCAGGCGT
CGTTTCTTGCGCTCTTGGCATGGCCGGCATCTTCCTAGCCTTTCTCCTGG
CGTGCAACAGCATCAAGAACAAGGAGCGGAAGCACGTGACAGGCCTGCTT
GCTTCAGTCATGTTCTTCCAGTTCATCGGGGCCTTGGGCTGCGTTGTCTC
ATGGGTCTGCCTGAATCAAATTGCGGCTTCGGACCTGGACGTGACGCTCC
CTGGTGCCGACCTCTACTTTGGCAAGAGCTGGTTTGCCATGACGGTCTCG
AGCGCCATTGCCTTCTTCGCCTTTTGCGGCACGGCCCATGCTTCGCGGAA
AGAGCGCGCGAAGGAACGGGCCGCCCTCCGAAAGAACAGCAGGGCAGAGG
GATACGAGGGAGCTTACAGCTACGACGACCAGGAGGAGGAGGAGGAGGAG
TACAAAAACGATGGGATGCACGCGGTCGTGACGAACCCCTAGAGGGAGGG
AGGG back to topprotein sequence of jgi.p|Nanoce1779_2|589574 >mRNA_4554-protein ID=mRNA_4554-protein|Name=jgi.p|Nanoce1779_2|589574|organism=Nannochloropsis oceanica|type=polypeptide|length=299bp
MRVCSTFGKFWGWWLLKEECPYSADGSGQAIVTLSSVHCHQVATTTPSPF
TFTSTGTFIYAGSTVLATWALLTLAWSTSSEPTLTVDGMPTSVFMRMGPF
GMKARVSQAGAPLYTADAFHWCSRTDPGPIFDEPTHQFAYCTFLTATQIS
GVVSCALGMAGIFLAFLLACNSIKNKERKHVTGLLASVMFFQFIGALGCV
VSWVCLNQIAASDLDVTLPGADLYFGKSWFAMTVSSAIAFFAFCGTAHAS
RKERAKERAALRKNSRAEGYEGAYSYDDQEEEEEEYKNDGMHAVVTNP* back to topmRNA from alignment at scaffold_10:928147..930179+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4554 ID=mRNA_4554|Name=jgi.p|Nanoce1779_2|589574|organism=Nannochloropsis oceanica|type=mRNA|length=2033bp|location=Sequence derived from alignment at scaffold_10:928147..930179+ (Nannochloropsis oceanica)
ACAGGACCCGCCGACTTTCAACCCAGCAAGACACACACAGTAACCATGCG
TGTTTGCAGCACCTTCGGTAAGTTTTGGGGGTGGTGGTTGTTGAAAGAGG
AATGCCCTTACTCGGCCGACGGAAGCGGCCAGGCCATCGTGACCCTCTCT
TCAGTTCATTGCCACCAAGTCGCGACAACCACACCTTCCCCTTTCACCTT
CACTTCCACAGGCACTTTTATATACGCCGGCTCCACTGTCCTCGCGACCT
GGGCCCTCCTTACCCTGGGTACGTGATTTCTTCGCCGGCTGTGGACCTAC
GAATCCGCGGGAGCGATTTGTTCTATTACCGGTCATTTCACCCTTCCCTC
CCTCACTCCTTCCCTCTCTCACTCCCTCCTTCCCTCCCTTCCCCAGCCTG
GTCTACCTCTAGTGAACCGACGCTGACCGTGGACGGAATGCCCACCTCCG
TCTTCATGCGCATGGGTCCTTTCGGTATGAAGGCTCGAGTCAGTCAGGTA
ACGAGAGAGAGGGAAAGAGAGAAGGCGGGGTGGTAGGGAGAGATGCATGA
AAAGGAAGGAGTGGAAAACAGATAGAGAGGTTGTGGGATAGCATTATGGG
AGCGGCGTGGGCAGAAATTCTCGCTGGTTTCTGATCCCTCCCTCCCTCCC
TCCCTGTCCCCCTTCCTTCCTATTCATCCCATCCTCCCTCGCTCCTCTCC
TCTTCATTTCAGTATTTCATGCTCCCCCAGCTCATTTAACTCCACTCCCT
CCCCTGCTCATTTAAACTTCACTCCTCCCCCTTTCTCTCCTTCTTTCGCC
CCTCTTTCCCCCCCTAAGGCGGGCGCGCCCCTGTACACGGCCGACGCTTT
TCACTGGTGCTCTCGCACGGACCCCGGGCCCATATTCGACGAGCCCACGC
ACCAATTTGCCTACTGCACTTTTCTGACCGCCACACAGATTTCAGGTACA
GAGGGCAGGAGGGCAGGAGGGCAGGAGGGAGGGAGGGAGGGAGGCTGTCG
GCCTCGTAGTACGAAGTGGATAGAGGGAGGAAAAACAGGAGACTCATCCC
TTCCCTCCTTCCCTCCCTCCCTCTCTCTCTTCTTGTCCTCCATAAGGCGT
CGTTTCTTGCGCTCTTGGCATGGCCGGCATCTTCCTAGCCTTTCTCCTGG
CGTGCAACAGCATCAAGAACAAGGAGCGGAAGCACGTGACAGGCCTGCTT
GCTTCAGTCATGTTCTTCCAGTTCATCGGGGCCTTGGTACGCGCCCTCCC
TCCCTCCCTCCCCCCCTCCCTCGCGAACGCCCATGCTCCCCCTCGATCAA
AAGCGTCAGCTCATCTCTCCCTCCCCTCCTCCTACTCAACCCCCTCCCTC
CCTCCTTCCCTCCCTCCCTCCCTCCAGGGCTGCGTTGTCTCATGGGTCTG
CCTGAATCAAATTGCGGCTTCGGACCTGGACGTGACGCTCCCTGGTGCCG
ACCTCTACTTTGGCAAGAGCTGGTTTGCCATGACGGGTAGGTCGGATCTC
CCTCCCTCCCTCCCCCCCTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCC
TCCCTTCCCCACCCCCCCCCCTTGCCTCCCTCCCTTCCTCCCTTCTGTCC
TCTCTTTTTCTCGCTCTCGCTCCCTCCCTCCCACCCCGCCTCCTTCTCTC
TCTTTTTCCTCTCTCGCTCTATGGCGCTGCATCCGTCTTCCCACTAATTT
CCTCCCTCCCTCCCTCCGTCTCATCCCTATCCCCCTCTCGCCCTTCCGTC
CCTCATTCTCAAGCACGTTGGCCCCCTCCCTCTCTGACGCTAACCCCTCC
CTCCCTCCCTCCCTCCCTCCCTAGTCTCGAGCGCCATTGCCTTCTTCGCC
TTTTGCGGCACGGCCCATGCTTCGCGGAAAGAGCGCGCGAAGGAACGGGC
CGCCCTCCGAAAGAACAGCAGGGCAGAGGGATACGAGGGAGCTTACAGCT
ACGACGACCAGGAGGAGGAGGAGGAGGAGTACAAAAACGATGGGATGCAC
GCGGTCGTGACGAACCCCTAGAGGGAGGGAGGG back to topCoding sequence (CDS) from alignment at scaffold_10:928147..930179+ >mRNA_4554 ID=mRNA_4554|Name=jgi.p|Nanoce1779_2|589574|organism=Nannochloropsis oceanica|type=CDS|length=5382bp|location=Sequence derived from alignment at scaffold_10:928147..930179+ (Nannochloropsis oceanica)
ATGCGTGTTTGCAGCACCTTCGGTAAGTTTTGGGGGTGGTGGTTGTTGAA
AGAGGAATGCCCTTACTCGGCCGACGGAAGCGGCCAGGCCATCGTGACCC
TCTCTTCAGTTCATTGCCACCAAGTCGCGACAACCACACCTTCCCCTTTC
ACCTTCACTTCCACAGGCACTTTTATATACGCCGGCTCCACTGTCCTCGC
GACCTGGGCCCTCCTTACCCTGGCCTGGTCTACCTCTAGTGAACCGACGC
TGACCGTGGACGGAATGCCCACCTCCGTCTTCATGCGCATGGGTCCTTTC
GGTATGAAGGCTCGAGTCAGTCAGGCGGGCGCGCCCCTGTACACGGCCGA
CGCTTTTCACTGGTGCTCTCGCACGGACCCCGGGCCCATATTCGACGAGC
CCACGCACCAATTTGCCTACTGCACTTTTCTGACCGCCACACAGATTTCA
GGCGTCGTTTCTTGCGCTCTTGGCATGGCCGGCATCTTCCTAGCCTTTCT
CCTGGCGTGCAACAGCATCAAGAACAAGGAGCGGAAGCACGTGACAGGCC
TGCTTGCTTCAGTCATGTTCTTCCAGTTCATCGGGGCCTTGGGCTGCGTT
GTCTCATGGGTCTGCCTGAATCAAATTGCGGCTTCGGACCTGGACGTGAC
GCTCCCTGGTGCCGACCTCTACTTTGGCAAGAGCTGGTTTGCCATGACGG
TCTCGAGCGCCATTGCCTTCTTCGCCTTTTGCGGCACGGCCCATGCTTCG
CGGAAAGAGCGCGCGAAGGAACGGGCCGCCCTCCGAAAGAACAGCAGGGC
AGAGGGATACGAGGGAGCTTACAGCTACGACGACCAGGAGGAGGAGGAGG
AGGAGTACAAAAACGATGGGATGCACGCGGTCGTGACGAACCCCTAGATG
CGTGTTTGCAGCACCTTCGGTAAGTTTTGGGGGTGGTGGTTGTTGAAAGA
GGAATGCCCTTACTCGGCCGACGGAAGCGGCCAGGCCATCGTGACCCTCT
CTTCAGTTCATTGCCACCAAGTCGCGACAACCACACCTTCCCCTTTCACC
TTCACTTCCACAGGCACTTTTATATACGCCGGCTCCACTGTCCTCGCGAC
CTGGGCCCTCCTTACCCTGGCCTGGTCTACCTCTAGTGAACCGACGCTGA
CCGTGGACGGAATGCCCACCTCCGTCTTCATGCGCATGGGTCCTTTCGGT
ATGAAGGCTCGAGTCAGTCAGGCGGGCGCGCCCCTGTACACGGCCGACGC
TTTTCACTGGTGCTCTCGCACGGACCCCGGGCCCATATTCGACGAGCCCA
CGCACCAATTTGCCTACTGCACTTTTCTGACCGCCACACAGATTTCAGGC
GTCGTTTCTTGCGCTCTTGGCATGGCCGGCATCTTCCTAGCCTTTCTCCT
GGCGTGCAACAGCATCAAGAACAAGGAGCGGAAGCACGTGACAGGCCTGC
TTGCTTCAGTCATGTTCTTCCAGTTCATCGGGGCCTTGGGCTGCGTTGTC
TCATGGGTCTGCCTGAATCAAATTGCGGCTTCGGACCTGGACGTGACGCT
CCCTGGTGCCGACCTCTACTTTGGCAAGAGCTGGTTTGCCATGACGGTCT
CGAGCGCCATTGCCTTCTTCGCCTTTTGCGGCACGGCCCATGCTTCGCGG
AAAGAGCGCGCGAAGGAACGGGCCGCCCTCCGAAAGAACAGCAGGGCAGA
GGGATACGAGGGAGCTTACAGCTACGACGACCAGGAGGAGGAGGAGGAGG
AGTACAAAAACGATGGGATGCACGCGGTCGTGACGAACCCCTAGATGCGT
GTTTGCAGCACCTTCGGTAAGTTTTGGGGGTGGTGGTTGTTGAAAGAGGA
ATGCCCTTACTCGGCCGACGGAAGCGGCCAGGCCATCGTGACCCTCTCTT
CAGTTCATTGCCACCAAGTCGCGACAACCACACCTTCCCCTTTCACCTTC
ACTTCCACAGGCACTTTTATATACGCCGGCTCCACTGTCCTCGCGACCTG
GGCCCTCCTTACCCTGGCCTGGTCTACCTCTAGTGAACCGACGCTGACCG
TGGACGGAATGCCCACCTCCGTCTTCATGCGCATGGGTCCTTTCGGTATG
AAGGCTCGAGTCAGTCAGGCGGGCGCGCCCCTGTACACGGCCGACGCTTT
TCACTGGTGCTCTCGCACGGACCCCGGGCCCATATTCGACGAGCCCACGC
ACCAATTTGCCTACTGCACTTTTCTGACCGCCACACAGATTTCAGGCGTC
GTTTCTTGCGCTCTTGGCATGGCCGGCATCTTCCTAGCCTTTCTCCTGGC
GTGCAACAGCATCAAGAACAAGGAGCGGAAGCACGTGACAGGCCTGCTTG
CTTCAGTCATGTTCTTCCAGTTCATCGGGGCCTTGGGCTGCGTTGTCTCA
TGGGTCTGCCTGAATCAAATTGCGGCTTCGGACCTGGACGTGACGCTCCC
TGGTGCCGACCTCTACTTTGGCAAGAGCTGGTTTGCCATGACGGTCTCGA
GCGCCATTGCCTTCTTCGCCTTTTGCGGCACGGCCCATGCTTCGCGGAAA
GAGCGCGCGAAGGAACGGGCCGCCCTCCGAAAGAACAGCAGGGCAGAGGG
ATACGAGGGAGCTTACAGCTACGACGACCAGGAGGAGGAGGAGGAGGAGT
ACAAAAACGATGGGATGCACGCGGTCGTGACGAACCCCTAGATGCGTGTT
TGCAGCACCTTCGGTAAGTTTTGGGGGTGGTGGTTGTTGAAAGAGGAATG
CCCTTACTCGGCCGACGGAAGCGGCCAGGCCATCGTGACCCTCTCTTCAG
TTCATTGCCACCAAGTCGCGACAACCACACCTTCCCCTTTCACCTTCACT
TCCACAGGCACTTTTATATACGCCGGCTCCACTGTCCTCGCGACCTGGGC
CCTCCTTACCCTGGCCTGGTCTACCTCTAGTGAACCGACGCTGACCGTGG
ACGGAATGCCCACCTCCGTCTTCATGCGCATGGGTCCTTTCGGTATGAAG
GCTCGAGTCAGTCAGGCGGGCGCGCCCCTGTACACGGCCGACGCTTTTCA
CTGGTGCTCTCGCACGGACCCCGGGCCCATATTCGACGAGCCCACGCACC
AATTTGCCTACTGCACTTTTCTGACCGCCACACAGATTTCAGGCGTCGTT
TCTTGCGCTCTTGGCATGGCCGGCATCTTCCTAGCCTTTCTCCTGGCGTG
CAACAGCATCAAGAACAAGGAGCGGAAGCACGTGACAGGCCTGCTTGCTT
CAGTCATGTTCTTCCAGTTCATCGGGGCCTTGGGCTGCGTTGTCTCATGG
GTCTGCCTGAATCAAATTGCGGCTTCGGACCTGGACGTGACGCTCCCTGG
TGCCGACCTCTACTTTGGCAAGAGCTGGTTTGCCATGACGGTCTCGAGCG
CCATTGCCTTCTTCGCCTTTTGCGGCACGGCCCATGCTTCGCGGAAAGAG
CGCGCGAAGGAACGGGCCGCCCTCCGAAAGAACAGCAGGGCAGAGGGATA
CGAGGGAGCTTACAGCTACGACGACCAGGAGGAGGAGGAGGAGGAGTACA
AAAACGATGGGATGCACGCGGTCGTGACGAACCCCTAGATGCGTGTTTGC
AGCACCTTCGGTAAGTTTTGGGGGTGGTGGTTGTTGAAAGAGGAATGCCC
TTACTCGGCCGACGGAAGCGGCCAGGCCATCGTGACCCTCTCTTCAGTTC
ATTGCCACCAAGTCGCGACAACCACACCTTCCCCTTTCACCTTCACTTCC
ACAGGCACTTTTATATACGCCGGCTCCACTGTCCTCGCGACCTGGGCCCT
CCTTACCCTGGCCTGGTCTACCTCTAGTGAACCGACGCTGACCGTGGACG
GAATGCCCACCTCCGTCTTCATGCGCATGGGTCCTTTCGGTATGAAGGCT
CGAGTCAGTCAGGCGGGCGCGCCCCTGTACACGGCCGACGCTTTTCACTG
GTGCTCTCGCACGGACCCCGGGCCCATATTCGACGAGCCCACGCACCAAT
TTGCCTACTGCACTTTTCTGACCGCCACACAGATTTCAGGCGTCGTTTCT
TGCGCTCTTGGCATGGCCGGCATCTTCCTAGCCTTTCTCCTGGCGTGCAA
CAGCATCAAGAACAAGGAGCGGAAGCACGTGACAGGCCTGCTTGCTTCAG
TCATGTTCTTCCAGTTCATCGGGGCCTTGGGCTGCGTTGTCTCATGGGTC
TGCCTGAATCAAATTGCGGCTTCGGACCTGGACGTGACGCTCCCTGGTGC
CGACCTCTACTTTGGCAAGAGCTGGTTTGCCATGACGGTCTCGAGCGCCA
TTGCCTTCTTCGCCTTTTGCGGCACGGCCCATGCTTCGCGGAAAGAGCGC
GCGAAGGAACGGGCCGCCCTCCGAAAGAACAGCAGGGCAGAGGGATACGA
GGGAGCTTACAGCTACGACGACCAGGAGGAGGAGGAGGAGGAGTACAAAA
ACGATGGGATGCACGCGGTCGTGACGAACCCCTAGATGCGTGTTTGCAGC
ACCTTCGGTAAGTTTTGGGGGTGGTGGTTGTTGAAAGAGGAATGCCCTTA
CTCGGCCGACGGAAGCGGCCAGGCCATCGTGACCCTCTCTTCAGTTCATT
GCCACCAAGTCGCGACAACCACACCTTCCCCTTTCACCTTCACTTCCACA
GGCACTTTTATATACGCCGGCTCCACTGTCCTCGCGACCTGGGCCCTCCT
TACCCTGGCCTGGTCTACCTCTAGTGAACCGACGCTGACCGTGGACGGAA
TGCCCACCTCCGTCTTCATGCGCATGGGTCCTTTCGGTATGAAGGCTCGA
GTCAGTCAGGCGGGCGCGCCCCTGTACACGGCCGACGCTTTTCACTGGTG
CTCTCGCACGGACCCCGGGCCCATATTCGACGAGCCCACGCACCAATTTG
CCTACTGCACTTTTCTGACCGCCACACAGATTTCAGGCGTCGTTTCTTGC
GCTCTTGGCATGGCCGGCATCTTCCTAGCCTTTCTCCTGGCGTGCAACAG
CATCAAGAACAAGGAGCGGAAGCACGTGACAGGCCTGCTTGCTTCAGTCA
TGTTCTTCCAGTTCATCGGGGCCTTGGGCTGCGTTGTCTCATGGGTCTGC
CTGAATCAAATTGCGGCTTCGGACCTGGACGTGACGCTCCCTGGTGCCGA
CCTCTACTTTGGCAAGAGCTGGTTTGCCATGACGGTCTCGAGCGCCATTG
CCTTCTTCGCCTTTTGCGGCACGGCCCATGCTTCGCGGAAAGAGCGCGCG
AAGGAACGGGCCGCCCTCCGAAAGAACAGCAGGGCAGAGGGATACGAGGG
AGCTTACAGCTACGACGACCAGGAGGAGGAGGAGGAGGAGTACAAAAACG
ATGGGATGCACGCGGTCGTGACGAACCCCTAG back to top
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