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Properties
| Property Name | Value |
|---|
| TranscriptId | 555474 |
| Track | FilteredModels2 |
| ProteinId | 555388 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:890546..895273 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4545 ID=mRNA_4545|Name=jgi.p|Nanoce1779_2|555388|organism=Nannochloropsis oceanica|type=mRNA|length=756bp
ACAGCGACCACCTAGGTCAAGCACTTGGAGACGACAGTGTATAACAGACG
CATTATCTTAGAATAGGCAGAAAGGGAGCTAGAATTGCAGCAGCTGCAGG
AACAGCATCAGCACCAGCGGTAATAGCAGCCGAACCAGTAGCAGTACCAG
TAGCGGTAGCAGTAGCGGTAGCAGTATCACCGAATGTCACTTTCCGCTCT
CCTCGCCGGCATTGCCAATCCCCCATCTCCCGCCCATCAGCTTTCCTACC
TGGAAGACCTCAATCTACAGCTCACCATTGGCCATGGTCCCCTCCGCCTT
GGTGAAGTGACCCCCCTCCTCCTCTCCCTCCTCACCTCTTCTTCCCCCTC
CCCCGAAGCTGTCCTCCTCGCCATCAGAGGCCTTAATACCATCCTGGACA
TTAACCCTCGTGCTGCTGATCTCTTTCGGCCGCCAAACCCGGCCATACCT
GCCTTGTGCGAGAAGCTGCTCACGATTGAAGATATTGAGATCGCTGAACA
ATGCCTGAAGTGCCTCAGCCTGGTGGCAGGGAGGGAAGGAGGTCAGGCCC
GGGCAGTGCTGGAGGCCGGGGGATTGACAGCCGCTACCCTATATTTTGAC
TTCTTTCCGTTACACCTTCAACGGCTTGCATTACGGACATGCCTGGCCTT
GTGTGCGTGCGTGGGAGGGAAAGAGGGAGGGAGGGGAGACGGGGAGAAGG
TCCAGGCGGTAGTGCCGTTTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG
TGTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|555388 >mRNA_4545-protein ID=mRNA_4545-protein|Name=jgi.p|Nanoce1779_2|555388|organism=Nannochloropsis oceanica|type=polypeptide|length=191bp
MSLSALLAGIANPPSPAHQLSYLEDLNLQLTIGHGPLRLGEVTPLLLSLL
TSSSPSPEAVLLAIRGLNTILDINPRAADLFRPPNPAIPALCEKLLTIED
IEIAEQCLKCLSLVAGREGGQARAVLEAGGLTAATLYFDFFPLHLQRLAL
RTCLALCACVGGKEGGRGDGEKVQAVVPFWWWWWWWWWWC* back to topmRNA from alignment at scaffold_10:890546..895273- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4545 ID=mRNA_4545|Name=jgi.p|Nanoce1779_2|555388|organism=Nannochloropsis oceanica|type=mRNA|length=4728bp|location=Sequence derived from alignment at scaffold_10:890546..895273- (Nannochloropsis oceanica)
ACAGCGACCACCTAGGTCAAGCACTTGGAGACGACAGTGTATAACAGACG
CATTATCTTAGAATAGGCAGAAAGGGAGCTAGAATTGCAGCAGCTGCAGG
AACAGCATCAGCACCAGCGGTAATAGCAGCCGAACCAGTAGCAGTACCAG
TAGCGGTAGCAGTAGCGGTAGCAGTATCACCGAATGTCACTTTCCGCTCT
CCTCGCCGGCATTGCCAATCCCCCATCTCCCGCCCATCAGCTTTCCTACC
TGGAAGACCTCAATCTACAGCTCACCATTGGCCATGGTCCCCTCCGCCTT
GGTGAAGTGACCCCCCTCCTCCTCTCCCTCCTCACCTCTTCTTCCCCCTC
CCCCGAAGCTGTCCTCCTCGCCATCAGAGGCCTTAATACCATCCTGGACA
TTAACCCTCGTGCTGCTGATCTCTTTGTCAAGCGAACTTACCAGCAAAAC
CGACAGCAACAGCAACAACAACTTCAACTGCAACAACAGCAGCAGCAGCA
GCAGCAGCGGCCGCCAAACCCGGCCATACCTGCCTTGTGCGAGAAGCTGC
TCACGATTGAAGATATTGAGATCGCTGAACAATGCCTGAAGTGCCTCAGC
CTGGTGGCAGGGAGGGAAGGAGGTCAGGCCCGGGCAGTGCTGGAGGCCGG
GGGATTGACAGCCGCTACCCTATATTTTGACTTCTTTCCGTTACACCTTC
AACGGCTTGCATTACGGACATGCCTGGCCTTGTGTGCGTGCGTGGGAGGG
AAAGAGGGAGGGAGGGGAGACGGGGAGAAGGTCCAGGCGGTAGTGCCGTT
TTGGGTCCGTTGTTTGGGGTTAGACGACCAGTTGATTCGGGTGCAGGCAT
GTCAGTGTCTGTGTACGGTGATTGAGAAATTCGCAGCCCTCCCTTCCTCC
CTCCCTCCTCCTCCTCTTCCACCTCCACCGTCAGCCCCGCGCTCGACGGT
TGAAGGTGGAGGGTTTGGCGCTGGTGGGGGAGGAGGGCGAGGAGGAGGAC
GAGGAAGAGGGGGAGGGAGAGAAGGAGGAAGCAGTGTAGCTTCTACGCTG
TCGTCGCTTTCTGTCCTGCTCCCTCCCGCGACGACTCTGTCTGTTGCTGC
TGATCATGGTGACGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAG
CAGCAGCGGCAGCATTGGTAACGGCAAAATGCGCTTCCTCCCGTCCATCC
TCCCGCTCCTCACCCCCTTCCTCCCTCCCGCCCTGGCGCTCGCACTTCCT
CCACCACCTCGCCCACACGGATGGTCTCCTCCCTCACTGGCAGCGTCTAC
TCGACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCGTCCCTCCCCATC
AAAACTCGAATCGTGAGGGCCTTGGCCTTCCTTGTCCAGAGGGCGCCTGC
CACTCTCTCTCTGATGTACAACCACGGCTTCCTTCCCTCCCTCCGTCGGC
TCCTCCTCCACGCCCTTGCGGAGGAGGAGGGAGGGGGGGAGGGGGGAAAT
GGGACAGATCCGGGAGCGGAGTCCTTTACGAAGGCTTTGTTTGTGCTGGC
CGAGGCGATGATGCCGAAGGTGGATGCACCGCATGACCCGCGGAGGGAGG
GAGGGAAGGAGGGGGGGAGGGAGGTCAGGTGGATGGAGAAGGAAAGCAGG
AAGGACAAGAGCGGTAGTAGGACCAGCAGCAGCAGCAGTAACAGCAGCAG
CAGCAGCAGTAACAGCAGCAGCAGTAACAGAGAGAAAACGCGAATAGCAA
AGGAGGATCACTTTGAAAAGGAAGAGAGGGAGGGCAGGAAGGAGGGAGGG
GTTGATGACATGGACGACAATGGTGAGGGAAAGAACCTAGCCTCTACCGG
CACTCCTGCTATTTCCTCCCTCCCTCCCTCCCTCGCATCCCCAGCATCCA
TAGATGACGCGGCATCAATTTTGGCGGCTGTCGCCGTTGCAGAGGAGAAG
GAAGGAAGGGAGGGAGGGGGGAAGGGAGGGGCATGGCCGTGTCCTGCTTG
TACTTTCCATAATTTCAATGGACTCGCCCTTCAGTGCGAGATGTGTGGGA
GCCGCAGCCCTCACTTGGCAGCCACCGTCGCCGCCGCAGCAGCGACAGCA
GCAGCAGCCGCGAGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGTAGGAGGAGGAGTAGTCGCAGCAAGAGCAGAAG
GAGGAAGAAAGGTAGCAGAAGCAGCCAGAGCAGCCGAAGCAGCCACCGCA
GCAGCAGCACTTGTCGGAGGAAGAGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAAGGAGGGAGAGGTGCTCCATTCCAATGCTGCCGAGGGCCCGTATG
GTTCCTTTTCCATCATGGCGGTATACGATGAATCTCCCTCTTACTTCTCC
ATGTACTGCAGCACTCTACTCCTTCCCCTCCTCCGCCTCGCCCTCCGCCA
CACCACCAGCACCATCCCCTCCTCCCTCCTCCCTTCCTCCTCCTCCTCTT
CCTCTTTCTCGCCTTCCTCCAGCAGCAGTAGTAGCAGCAGTGACACACTC
GGCTCGATGTGTGCGATCCTTTCCTCCCTTCATGCCCACTACCCGTCCTC
CCTCCACCCATCCGCCATCGCCTCCCCAATTGCAGCCCTCCTCTCTCGAC
CCGTGCTTTCTCTCCTCATGGACAGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGCGGGCGGGCTCGAGAGCAGGCCTTGCGACTAGGGACCTCACT
GTTGGAGTCGTTGCCGGAGGTGTACGGAGAGGAGTTTCTTAGGCACGGGG
TAGGGAGAGAGGTTCGACGCTGGGAGCAGCAGCAGCAGCAGCAGCGGCAG
GAGGAGCTGTCAGCGGAGAAGCACCAGCAAAACGAGGGCGCTGCCGGAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGTCAATGGAGTAATAATAACAA
AAGAGGCTTGCCCACCTTTCTACCCCTCTCTCCCCATCGCCCACCCCTCC
GATCAACTCAAGTCAAGAGTAGGAGGAGGAAGAGAACGAAGAGGAAGGGG
AAGAGGAGGAGGAAGAAGAGAAGACGAAGAAGACGAAAAAGAAGATAAAG
AAAAAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAGGAGGAGGCAAAGGA
GGCATATCTAAGTCTCGCATGTCCCTCTTTCCCTCCCCTCCCCCCTCCCT
CCCCCCCTCCCTCCCCGTAGCCCTGGCCCGATTTGCTGCGGCCCTACGAC
CAGCCACGCCCTCCCTCCCGCCCTCCCTCCCGCCCTCCCTGACCTCCTCC
TCCTCCTCCTCCTCCCCCTCCTCCCCCTCGGTAGGCCGAGGGACGACAAT
TTTCATGAGGACAAAAAAGCAGAAGGACCCTCAGGTTCATCTTGGTCGCC
AAGGAGAGGAGGAGGAGGGGAAGGAGGAAGGGGAAAGCGAGACGTCGCGT
CATCTCCGAAAGCTGGCCGGGGCATTGATGGACAGGAGGGAGGGAGGGAG
GGAGGAAGAGAGAGAGGGCAAGCATGACAAGAAGGTGGAAACGAAGAAGA
AGAAGAAGATGGAGGAAGGTCTGAGGAAGGGAGGGAAGGAGGGAGGGAAG
AAGACGCAGAAGGGGAATGAAATAAATGAGTCTGTCTCGAGCCACGACGA
CGAGGAAGAGGACGAGGAGGAGGAGGAAGGGAGGGAGGGAGGCGGGAGGT
TGGAAGGATTACTGAGGGCGTTGGCGGATGTGTTTTTAAGAAGGGGGGGA
GTGACGCCTTACGAGATGATAGAGAGTGGAATCGTGCCGGCGCTGGCCTC
CTTCTTGGGAGAGATACTGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGGGCAGGGGGAGGAAGGGGAGGAGCGATGGCATGGAA
AAGGCGAGGATGTTCGCGGCGGCGTTTGCTCGATCGGTGGGGAAGGGAGG
GAAGGAAGGAGGAGAGGAAGAGGGAGGATCCCCGGCAATGGTCATGTTGC
TGAGTGCCCTCCAAGCGACGCTAAGGGCAGTTGATGACCTTCCCACCGTC
CTTCATGGACATGGGAAGGGAGGGAGGGAGGGAGGGAGGAAGGGAGGAGA
GGTCTTCAACCAGTATTCAAACCTCCTTCGTCCTTTTCGCTTTCGTCTCA
AGCCCTCCTCGTCCTCCTTCCCTCCCTCCCCCTCGTTCTCGTCCATGCCC
TTTTCTTCGTCGGTGTTCTTGGTCGAACCGTTGACGACGGTTGGGCAGTT
GAGGAGGTATGTGGAGAGACAGGCACGGAACGCCTGTCAATGGAGGAGGG
AGAAGGAGGAGGAAGAAGCCAGGAAAAGGAGGGAGGAGGGGAGGAGGAGG
GAGGAGGCGGAGCAGGCCGTTGCCATGGTGGCGGCGGCAAGGAGAAGGGC
GCAGCGGGCAAGGAGGGAAGGAAGGAGGGAGGAGTTGAAGGGAAAAAAGG
AGGAGGAGGAGAAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAA
AGGGGGGGGCAACATTTGGGCATCCATTCGCCGTCGTTCCCTTCGGACTG
AGCGAGGAGAGGGCGCGTTTTCCTCTTCCTCTTCCACGTCCTCCCTCCCT
TCCTCCTCCTCCTCGTCTACCTCAGCGGTGATGAGCATGACTAGAAGAAG
CAAACGTGGTTGCACGCCTACCGCGACTACTGCTGCTATTGCTAGTGGTG
GTGGTGGTGGTGGTGGTGGTGGTGTTGA back to topCoding sequence (CDS) from alignment at scaffold_10:890546..895273- >mRNA_4545 ID=mRNA_4545|Name=jgi.p|Nanoce1779_2|555388|organism=Nannochloropsis oceanica|type=CDS|length=1719bp|location=Sequence derived from alignment at scaffold_10:890546..895273- (Nannochloropsis oceanica)
TGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTGACGGCCGCCAAACCCGGC
CATACCTGCCTTGTGCGAGAAGCTGCTCACGATTGAAGATATTGAGATCG
CTGAACAATGCCTGAAGTGCCTCAGCCTGGTGGCAGGGAGGGAAGGAGGT
CAGGCCCGGGCAGTGCTGGAGGCCGGGGGATTGACAGCCGCTACCCTATA
TTTTGACTTCTTTCCGTTACACCTTCAACGGCTTGCATTACGGACATGCC
TGGCCTTGTGTGCGTGCGTGGGAGGGAAAGAGGGAGGGAGGGGAGACGGG
GAGAAGGTCCAGGCGGTAGTGCCGTTTTGGATGTCACTTTCCGCTCTCCT
CGCCGGCATTGCCAATCCCCCATCTCCCGCCCATCAGCTTTCCTACCTGG
AAGACCTCAATCTACAGCTCACCATTGGCCATGGTCCCCTCCGCCTTGGT
GAAGTGACCCCCCTCCTCCTCTCCCTCCTCACCTCTTCTTCCCCCTCCCC
CGAAGCTGTCCTCCTCGCCATCAGAGGCCTTAATACCATCCTGGACATTA
ACCCTCGTGCTGCTGATCTCTTTTGGTGGTGGTGGTGGTGGTGGTGGTGG
TGTTGACGGCCGCCAAACCCGGCCATACCTGCCTTGTGCGAGAAGCTGCT
CACGATTGAAGATATTGAGATCGCTGAACAATGCCTGAAGTGCCTCAGCC
TGGTGGCAGGGAGGGAAGGAGGTCAGGCCCGGGCAGTGCTGGAGGCCGGG
GGATTGACAGCCGCTACCCTATATTTTGACTTCTTTCCGTTACACCTTCA
ACGGCTTGCATTACGGACATGCCTGGCCTTGTGTGCGTGCGTGGGAGGGA
AAGAGGGAGGGAGGGGAGACGGGGAGAAGGTCCAGGCGGTAGTGCCGTTT
TGGATGTCACTTTCCGCTCTCCTCGCCGGCATTGCCAATCCCCCATCTCC
CGCCCATCAGCTTTCCTACCTGGAAGACCTCAATCTACAGCTCACCATTG
GCCATGGTCCCCTCCGCCTTGGTGAAGTGACCCCCCTCCTCCTCTCCCTC
CTCACCTCTTCTTCCCCCTCCCCCGAAGCTGTCCTCCTCGCCATCAGAGG
CCTTAATACCATCCTGGACATTAACCCTCGTGCTGCTGATCTCTTTTGGT
GGTGGTGGTGGTGGTGGTGGTGGTGTTGACGGCCGCCAAACCCGGCCATA
CCTGCCTTGTGCGAGAAGCTGCTCACGATTGAAGATATTGAGATCGCTGA
ACAATGCCTGAAGTGCCTCAGCCTGGTGGCAGGGAGGGAAGGAGGTCAGG
CCCGGGCAGTGCTGGAGGCCGGGGGATTGACAGCCGCTACCCTATATTTT
GACTTCTTTCCGTTACACCTTCAACGGCTTGCATTACGGACATGCCTGGC
CTTGTGTGCGTGCGTGGGAGGGAAAGAGGGAGGGAGGGGAGACGGGGAGA
AGGTCCAGGCGGTAGTGCCGTTTTGGATGTCACTTTCCGCTCTCCTCGCC
GGCATTGCCAATCCCCCATCTCCCGCCCATCAGCTTTCCTACCTGGAAGA
CCTCAATCTACAGCTCACCATTGGCCATGGTCCCCTCCGCCTTGGTGAAG
TGACCCCCCTCCTCCTCTCCCTCCTCACCTCTTCTTCCCCCTCCCCCGAA
GCTGTCCTCCTCGCCATCAGAGGCCTTAATACCATCCTGGACATTAACCC
TCGTGCTGCTGATCTCTTT back to top
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