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Properties
| Property Name | Value |
|---|
| TranscriptId | 577446 |
| Track | FilteredModels2 |
| ProteinId | 577360 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:1113284..1114492 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_452 ID=mRNA_452|Name=jgi.p|Nanoce1779_2|577360|organism=Nannochloropsis oceanica|type=mRNA|length=790bp
CAGGCAGCACCAAAGCACCATGTACCGCAAGGTCTTCTTCATAACCATCG
TCGCCCTTGTGGCCCTGACCGCGTCTGCCAAGCAAGGCGACGGCGTTGAC
CTGGACCCTGAGGAGAAAGTGCGCATAGGCGTCAAGTTTCGCCCTGAGAA
GTGCGACGTTAAGTCCAAGAAAGGCGACAAACTGTCAATGCACTATACGG
GCACCCTCTACAAGGATGGGAGCAAGTTCGACTCGAGCCTGGACCGCAAC
CAGCCCTTTGAATTCACCTTGGGCCAAGGCCAGGTCATCAAGGGATGGGA
CAACGGCCTCATTAACATGTGCCCGGGCGAGAAGCGACGCCTGACTATCC
CCGCCTCTCATGGCTACGGCGACCGAGGCGCGGGTGCCAAGATCCCGGGC
GGTGCCACTCTGGTCTTTGACGTGGAGCTGCTGGGTATCACTAGCCCGGA
TAGCGGCAAGGAGTTCTAAAGTTCTTCGATACCGGAAAGGAAGAGCGAGA
CAGAGAGAATGGAAAGGGGCCACAAAAGTTATTTTTGCGACGTACGTAAA
CAATGGAAAAGGGTTTCTTGCTTACCTTGTTGGCTGGTACTAGAAAATAA
AGAAATTGGAGGGAGGATCGGAAAGAGCCATAGATAAGAGAGCGAGAGAG
GCAGAGAGGGAAGGAGAGAGGCGGGATGGAGGTCACATCAACTGTCCTCC
ACCCGGCTATCACCCCTCTGTAGAGACAATAGGAGGCAACGGTACTCTGG
AGAAGAAAGGGAAAAAGGAAAAGTATCGGAACAGCTGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|577360 >mRNA_452-protein ID=mRNA_452-protein|Name=jgi.p|Nanoce1779_2|577360|organism=Nannochloropsis oceanica|type=polypeptide|length=150bp
MYRKVFFITIVALVALTASAKQGDGVDLDPEEKVRIGVKFRPEKCDVKSK
KGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINM
CPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGITSPDSGKEF* back to topmRNA from alignment at scaffold_3:1113284..1114492- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_452 ID=mRNA_452|Name=jgi.p|Nanoce1779_2|577360|organism=Nannochloropsis oceanica|type=mRNA|length=1209bp|location=Sequence derived from alignment at scaffold_3:1113284..1114492- (Nannochloropsis oceanica)
CAGGCAGCACCAAAGCACCATGTACCGCAAGGTCTTCTTCATAACCATCG
TCGCCCTTGTGGCCCTGACCGCGTCTGCCAAGCAAGGCGACGGCGTTGAC
CTGGACCCTGAGGAGAAAGTGGTAAGTGTTGTGTGGTGGTGGTTTTGCTG
AAGCCGGTATTAAACAGGAGAAGTGCAGGGGTGAGCGTGCCTCACTCACA
ACTACTTATTGCTGATAATACTCTCCTCAAACCCACCTATCCCACATCTA
CAAACAACAAACAGCGCATAGGCGTCAAGTTTCGCCCTGAGAAGTGCGAC
GTTAAGTCCAAGAAAGGCGACAAACTGTCAATGCACTATACGGGCACCCT
CTACAAGGATGGGAGCAAGTTCGACTCGAGCCTGGACCGCAACCAGCCCT
TTGAATTCACCTTGGGCCAAGGCCAGGTATGTATCATTGACCGTCATTAT
TCCTTCAAGCATTTCTGATGGCGCTAAATCATGCTTTCTTATCAATCCCG
ATAGGTCATCAAGGGATGGGACAACGGCCTCATTAACATGTGCCCGGGCG
AGAAGCGACGCCTGACTATCCCCGCCTCTCATGGCTACGGCGACCGAGGC
GCGGTACGGATAGAGAGCGAAAGATTTAGCTCCTCTCCCGGCTTTCTTGT
CATGTCTAGCTCCGTTTCTTTGAAATTTGCCCCCGCTCCTATCCCTTGAC
TTGCGCCTGTCATGGCCTTTCTGCAAATCTTAATTTCTTTTACTCTCAGT
CAAGCATGCCCACAATCATCTTCTTCATCATCGTTCACCTCACGATAACA
GGGTGCCAAGATCCCGGGCGGTGCCACTCTGGTCTTTGACGTGGAGCTGC
TGGGTATCACTAGCCCGGATAGCGGCAAGGAGTTCTAAAGTTCTTCGATA
CCGGAAAGGAAGAGCGAGACAGAGAGAATGGAAAGGGGCCACAAAAGTTA
TTTTTGCGACGTACGTAAACAATGGAAAAGGGTTTCTTGCTTACCTTGTT
GGCTGGTACTAGAAAATAAAGAAATTGGAGGGAGGATCGGAAAGAGCCAT
AGATAAGAGAGCGAGAGAGGCAGAGAGGGAAGGAGAGAGGCGGGATGGAG
GTCACATCAACTGTCCTCCACCCGGCTATCACCCCTCTGTAGAGACAATA
GGAGGCAACGGTACTCTGGAGAAGAAAGGGAAAAAGGAAAAGTATCGGAA
CAGCTGTGA back to topCoding sequence (CDS) from alignment at scaffold_3:1113284..1114492- >mRNA_452 ID=mRNA_452|Name=jgi.p|Nanoce1779_2|577360|organism=Nannochloropsis oceanica|type=CDS|length=1800bp|location=Sequence derived from alignment at scaffold_3:1113284..1114492- (Nannochloropsis oceanica)
GGTGCCAAGATCCCGGGCGGTGCCACTCTGGTCTTTGACGTGGAGCTGCT
GGGTATCACTAGCCCGGATAGCGGCAAGGAGTTCTAAGTCATCAAGGGAT
GGGACAACGGCCTCATTAACATGTGCCCGGGCGAGAAGCGACGCCTGACT
ATCCCCGCCTCTCATGGCTACGGCGACCGAGGCGCGCGCATAGGCGTCAA
GTTTCGCCCTGAGAAGTGCGACGTTAAGTCCAAGAAAGGCGACAAACTGT
CAATGCACTATACGGGCACCCTCTACAAGGATGGGAGCAAGTTCGACTCG
AGCCTGGACCGCAACCAGCCCTTTGAATTCACCTTGGGCCAAGGCCAGAT
GTACCGCAAGGTCTTCTTCATAACCATCGTCGCCCTTGTGGCCCTGACCG
CGTCTGCCAAGCAAGGCGACGGCGTTGACCTGGACCCTGAGGAGAAAGTG
GGTGCCAAGATCCCGGGCGGTGCCACTCTGGTCTTTGACGTGGAGCTGCT
GGGTATCACTAGCCCGGATAGCGGCAAGGAGTTCTAAGTCATCAAGGGAT
GGGACAACGGCCTCATTAACATGTGCCCGGGCGAGAAGCGACGCCTGACT
ATCCCCGCCTCTCATGGCTACGGCGACCGAGGCGCGCGCATAGGCGTCAA
GTTTCGCCCTGAGAAGTGCGACGTTAAGTCCAAGAAAGGCGACAAACTGT
CAATGCACTATACGGGCACCCTCTACAAGGATGGGAGCAAGTTCGACTCG
AGCCTGGACCGCAACCAGCCCTTTGAATTCACCTTGGGCCAAGGCCAGAT
GTACCGCAAGGTCTTCTTCATAACCATCGTCGCCCTTGTGGCCCTGACCG
CGTCTGCCAAGCAAGGCGACGGCGTTGACCTGGACCCTGAGGAGAAAGTG
GGTGCCAAGATCCCGGGCGGTGCCACTCTGGTCTTTGACGTGGAGCTGCT
GGGTATCACTAGCCCGGATAGCGGCAAGGAGTTCTAAGTCATCAAGGGAT
GGGACAACGGCCTCATTAACATGTGCCCGGGCGAGAAGCGACGCCTGACT
ATCCCCGCCTCTCATGGCTACGGCGACCGAGGCGCGCGCATAGGCGTCAA
GTTTCGCCCTGAGAAGTGCGACGTTAAGTCCAAGAAAGGCGACAAACTGT
CAATGCACTATACGGGCACCCTCTACAAGGATGGGAGCAAGTTCGACTCG
AGCCTGGACCGCAACCAGCCCTTTGAATTCACCTTGGGCCAAGGCCAGAT
GTACCGCAAGGTCTTCTTCATAACCATCGTCGCCCTTGTGGCCCTGACCG
CGTCTGCCAAGCAAGGCGACGGCGTTGACCTGGACCCTGAGGAGAAAGTG
GGTGCCAAGATCCCGGGCGGTGCCACTCTGGTCTTTGACGTGGAGCTGCT
GGGTATCACTAGCCCGGATAGCGGCAAGGAGTTCTAAGTCATCAAGGGAT
GGGACAACGGCCTCATTAACATGTGCCCGGGCGAGAAGCGACGCCTGACT
ATCCCCGCCTCTCATGGCTACGGCGACCGAGGCGCGCGCATAGGCGTCAA
GTTTCGCCCTGAGAAGTGCGACGTTAAGTCCAAGAAAGGCGACAAACTGT
CAATGCACTATACGGGCACCCTCTACAAGGATGGGAGCAAGTTCGACTCG
AGCCTGGACCGCAACCAGCCCTTTGAATTCACCTTGGGCCAAGGCCAGAT
GTACCGCAAGGTCTTCTTCATAACCATCGTCGCCCTTGTGGCCCTGACCG
CGTCTGCCAAGCAAGGCGACGGCGTTGACCTGGACCCTGAGGAGAAAGTG back to top
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