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Properties
| Property Name | Value |
| TranscriptId | 589331 |
| Track | FilteredModels2 |
| ProteinId | 589245 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_10 | supercontig | scaffold_10:696660..700467 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4478 ID=mRNA_4478|Name=jgi.p|Nanoce1779_2|589245|organism=Nannochloropsis oceanica|type=mRNA|length=2044bp AAGATAAAAACGAAAATAAACAGATGGGGCTGTCATGCACCCACTGAAAC GATGAAAGAGACCTGAGTCGAGTTTCGAGTGGCCCTCTTGTGGCAGGTGA CTTGATTCTGGGTTGCAGCGCTGCACCTCAGATCGAGAAGAACAGCACAC CAGAAGCCAACAGCACCTCCAGATAATGGTCCCGCGCCGAATCCAGGCCT TTATGGGGATGGTGTTAGCGTGCAGCAGTATAACGTGCCCAATCATGGCC TTTGTGTCCTTTCCTGCACGAGGTCCGGCCATCCTAAGCCGTGGCAGAAA AGCAGTAGCACCCCTAGCCCCTACGCATCACTACGGCCTTCCCGCTTTGT ACATGCACCTGGGCAGCGAACCACCTCCGCCCACACTCGTGGAGGAGACC AGTGCCATTCTAGACATCCCGGCGGCTTTGATTAGTAACAACTTTCCTAC CCCCAACTCGAACTCGAGCCTTATCACGGCAGCTTTGCGATTTCTTGAGG GCGAACCCATGGACAAGCAGATCTTGAAAAAATGGCTCAATCTGGTGCTC TTGGTCGCAGCGGGAGTCTATGGCACCTCGCTCCTCGTCACCGTGGACAT GGATAACTGGCGGGGTTGGACCTTGCAAGAAATCATGCTCCGTATTCCCT ACGACAACTGGCAAGAGTATGAAGGAGGCCTGAGCACACATCCCATCCTG GTGAAAACGATTATCAATGTCGTGATTTACATTATCGGTGACTGGATGTC ACAAGTCGGTTGGGGCCGCACAAAAAATTTGCTTGACTTTGACCTGGCGC GCACAGCTCGTAATGGCCTCATCGGTGCTATGTTTGGGCCGCTGGTTCAC TATTATTATGATTTCTCGGATTGGCTCCTGCCGATGGACGTGCCTATTAA TAGGGTCTACAAGCTCCTCATGGATCAGTCTATTTATTTCTTTGTCAAGT GTAGCGCATACATCGCTTTGGTAGGTCTGTTGCGTGGCGATCCACCGAAG GAAGTGGTGCAGGACGTGAAAGGGCGCATTTGGCCCGTCGTTTTCCGCGG ATGGCGCTTCTGGCCAGTGGCGCACATTGTAACGTACGGCTTCATTCCTA CCCGGCATCGTGTCCTGTGGGTGAACATGCTTGACTTGCTGTGGTCCTCT ATCCTTGCCCAATTGGCCTCCAAGGAAGGGGGGGAAGAGTTGGCTGCGGC TTCGGTGGCAGTTGAAATCTCTGGGGCTGCTCCCAATGCTCTCGAAACCA GCCAGACTTCTGCTTCCGCCTTGCCTCCTTCCTGTTCTCAGATGGTTCCT AATGCATCGGTCACAGCATATTTCGCAGAGAACCGCACCGAGGAGGATGC AGCAATGCAGGAAGCGATAGCAGCAACAGCAAGAGATTCAATGCCTTCAC TGTTGCCCATCACGGCCGACGAGCTTTCCTCAGCTCCTGGGCTTGACGTT GTTAATCCTCATGACGGAGAGACAGGAGAAGAGAAAGGCGTCAACTTGCT GGTACAGTTGGGAAGAAAGGAGGCGGGGGGGCGGTGAAATGAAAGGCAGA TAAATATATATATCCTCGAGAGGATGGCAGATAAACGGGAGAAAAGGTAG ATAACTGATTTTAAATACAAGCACACAGGGGGGTTGCCGCAAGGTCGTCC CATTGTATTATGTCTGTGCCACCTCATTTTCCAGTGTTATTACGAAGATC AATTTCGCTTGTACATTTCGTCTTTCGCAGGTCAATAAGTAGTCGAATTC TTAGGTCACAATGATTGAGGGAAATGAAATAGATGGAGTTGCAGTGGCCA GCAGCGAAGGAAAAAGAAACAGGAGGTGGGGATAAGATGAAGGGAAGGGT GGACGCAGCGAGGGAACGAGAGAGTGCGTGTGTGATTTAAATACGGCACA GGAGCAGGGGAGATTGGAAACCGGTCTTCGCTGTCGTTGCTGCATTGAAA CGTTTACACATCAGATGTCTGTGCTTTTCTCAGCCAAAAACGCCCTCTTT AGATAATTTTCAACGCAACATAAACGTTACAAGGATGATGCTTT back to topprotein sequence of jgi.p|Nanoce1779_2|589245 >mRNA_4478-protein ID=mRNA_4478-protein|Name=jgi.p|Nanoce1779_2|589245|organism=Nannochloropsis oceanica|type=polypeptide|length=454bp MVPRRIQAFMGMVLACSSITCPIMAFVSFPARGPAILSRGRKAVAPLAPT HHYGLPALYMHLGSEPPPPTLVEETSAILDIPAALISNNFPTPNSNSSLI TAALRFLEGEPMDKQILKKWLNLVLLVAAGVYGTSLLVTVDMDNWRGWTL QEIMLRIPYDNWQEYEGGLSTHPILVKTIINVVIYIIGDWMSQVGWGRTK NLLDFDLARTARNGLIGAMFGPLVHYYYDFSDWLLPMDVPINRVYKLLMD QSIYFFVKCSAYIALVGLLRGDPPKEVVQDVKGRIWPVVFRGWRFWPVAH IVTYGFIPTRHRVLWVNMLDLLWSSILAQLASKEGGEELAAASVAVEISG AAPNALETSQTSASALPPSCSQMVPNASVTAYFAENRTEEDAAMQEAIAA TARDSMPSLLPITADELSSAPGLDVVNPHDGETGEEKGVNLLVQLGRKEA GGR* back to topmRNA from alignment at scaffold_10:696660..700467- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4478 ID=mRNA_4478|Name=jgi.p|Nanoce1779_2|589245|organism=Nannochloropsis oceanica|type=mRNA|length=3808bp|location=Sequence derived from alignment at scaffold_10:696660..700467- (Nannochloropsis oceanica) AAGATAAAAACGAAAATAAACATCAAATTTAGGTCGAGTGCGGGTAGCAA
CCATGTACGCGTCGCTCTTGTTGCTGTTCCTTCCTCTTCTAAACATCTCA
ATAATTGAGAAGGGTTGTGTCTAAGAAGGAAAAATGAGAAGGCAGCTAGG
CTTACACATTTCGCTGGAACCTACATTGATTCCGACGACATGTACCGTGT
CGACTTCGCTGCGAAATAATAAGGCTTACTTCAGCGATTTTTGCCAAGGC
GACTTCAGTGTCACTGGGCTTTCGAGCTGGCTGGCGAGGCAACTTGTCCC
GGACAGGTCAATTTCGTGGCGAGAGTGTGCAAAAGGATGCCGAATCGTTG
CCGCTAGCCGATTGATAGATCGTACGTGTGCATTTCAATGGGTTAAGCAT
TCCAGCAGGCGAGGTACAATTGCTCCTTCAACCTTTCTGGCGCGTAAGTC
TTTGACGACTTGATCAGTGCGGACTAGATGATAATGGACCGTAGGCCCTG
GCGGGATGCACTGGCAAATGCAATTAGCTGTAAAAGTGCTTGGGATGGAG
TTGGTTTTCCCTCTGCGGTTGGAGAAGGCAAAGGAGTTATGGTGAAAAAT
GAAATGTATGAGTACTACTAGTAGCGGTGATGTCGCATGTCTGGGTGACG
TGGGTGCATGCATCATTGCGCTTTGAAAAGCCCCAAATCTACACGAAAGC
GCAGAGAGATAAATCAACATATGCCATGCATCGAGACGGATCTTTGCGGA
GTTTAGCTCAAGTTGAAGCGCAGACCTGCATAATTTATTCACCATACCTT
CAGCTTTGATCTTTTCGTGTTTTCACGGTCTGCGTGACGAGCCTCCGTCT
CCTTCGCTCCCTCCCCTAATGAGGCCAGCCCGACGCAAGGCCACCAGATA
GTCTCGATACGAGCAAAATAATATGTTGATGGGTCGAGGCGCATCCCGCG
GTGGTCTTTTGCCACTGCGGCTGCGCTTGCTCCCTCTCCTCCCCTCCATC
TCCCCACCCCTTGGCTTATCCGTATTCTTCTCGGCGTCTTCTGAATGCTT
GTTTGGCTCTTTGTTAACGGGCGGCGGCGTCGGATGAGATGGTAGGTCCT
CATCGTCGTCGAAATCCAGCTCGTCTTGTTCGTCGTGTGGGTCCATGGCG
AAATAAAAGTCTAGGGATTAGCTGGGAGGGTAGGAGGCTGGTGGTGAGAG
GGGTAGTATGAGGGGCTCGGTTCAAGGCAGCTTTGCAGGCTTGTGTCGTC
GTCTATCGACTGCTTTATCCACAGAAAATGCTGTATATGTGTGAATAACG
AGAGGAGGCAGTGGGAAAAGAGAAATCTCGAGCCAGGGCTAGGAAGTGAA
ATAGTCTCCTGGTTGCAGCATCCCGGGCGCGGCCTGGGACCGAAGGAACG
ACCTCAGGTTGGACTCTCGGAGATCGGAGTTCTATCGCGTTTGCAATGAT
GCCTTGTCTACACCTTTTCTTATGTCTCTTCATTCTCCCGCACTGCACCA
AAACACACAGATGGGGCTGTCATGCACCCACTGAAACGATGAAAGAGACC
TGAGTCGAGTTTCGAGTGGCCCTCTTGTGGCAGGTGACTTGATTCTGGGT
TGCAGCGCTGCACCTCAGATCGAGAAGAACAGCACACCAGAAGCCAACAG
CACCTCCAGATAATGGTCCCGCGCCGAATCCAGGCCTTTATGGGGATGGT
GTTAGCGTGCAGCAGTATAACGTGCCCAATCATGGCCTTTGTGTCCTTTC
CTGCACGAGGTCCGGCCATCCTAAGCCGTGGCAGAAAAGCAGTAGCACCC
CTAGCCCCTACGCATCACTACGGCCTTCCCGCTTTGTACATGCACCTGGG
CAGCGAACCACCTCCGCCCACACTCGTGGAGGAGACCAGTGCCATTCTAG
ACATCCCGGCGGCTTTGATTAGTAACAACTTTCCTACCCCCAACTCGGTA
AGTTAGTGGAAGAAATAACGCTACTCCATCCTGACCTCTGTAGTTAGTAC
ATCCCTCCATGCTTACACACACACACACACACACACACACACACACACAC
ACACACACACACAAACATACATGCATCACCAGAACTCGAGCCTTATCACG
GCAGCTTTGCGATTTCTTGAGGGCGAACCCATGGACAAGCAGATCTTGAA
AAAATGGCTCAATCTGGTGCTCTTGGTCGCAGCGGGAGTCTATGGCACCT
CGCTCCTCGTCACCGTGGACATGGATAACTGGCGGGGTTGGACCTTGCAA
GAAATCATGCTCCGTATTCCCTGTAAGAGCTGTAATAAAATCCAGGCAGT
GGGGCCTCTAGAGACCCCGTTTCATCTTGTCATGTTGTCACATAAACAAG
TACCATTCCTGCCACTTGATAACATGCCCCTTCCTCCTCTCTCTCTCCCA
CCCCAACCACGCAGACGACAACTGGCAAGAGTATGAAGGAGGCCTGAGCA
CACATCCCATCCTGGTGAAAACGATTATCAATGTCGTGATTTACATTATC
GGTGACTGGATGTCACAAGTCGGTTGGGGCCGCACAAAAAATTTGCTTGA
CTTTGACCTGGCGCGCACAGCTCGTAATGGCCTCATCGGTGCTATGTTTG
GGCCGCTGGTTCACTATTATTATGATTTCTCGGATTGGCTCCTGCCGATG
GACGTGCCTATTAATAGGGTCTACAAGCTCCTCATGGATCAGTCTATTTA
TTTCTTTGTCAAGTGTAGCGCATACATCGCTTTGGTAGGTCTGTTGCGTG
GCGATCCACCGAAGGAAGTGGTGCAGGACGTGAAAGGGCGCATTTGGCCC
GTCGTTTTCCGCGGATGGCGCTTCTGGCCAGTGGCGCACATTGTAACGTA
CGGCTTCATTCCTACCCGGCATCGTGTCCTGTGGGTGAACATGCTTGACT
TGCTGTGGTCCTCTATCCTTGCCCAATTGGCCTCCAAGGAAGGGGGGGAA
GAGTTGGCTGCGGCTTCGGTGGCAGTTGAAATCTCTGGGGCTGCTCCCAA
TGCTCTCGAAACCAGCCAGACTTCTGCTTCCGCCTTGCCTCCTTCCTGTT
CTCAGATGGTTCCTAATGCATCGGTCACAGCATATTTCGCAGAGAACCGC
ACCGAGGAGGATGCAGCAATGCAGGAAGCGATAGCAGCAACAGCAAGAGA
TTCAATGCCTTCACTGTTGCCCATCACGGCCGACGAGCTTTCCTCAGCTC
CTGGGCTTGACGTTGTTAATCCTCATGACGGAGAGACAGGAGAAGAGAAA
GGCGTCAACTTGCTGGTACAGTTGGGAAGAAAGGAGGCGGGGGGGCGGTG
AAATGAAAGGCAGATAAATATATATATCCTCGAGAGGATGGCAGATAAAC
GGGAGAAAAGGTAGATAACTGATTTTAAATACAAGCACACAGGGGGGTTG
CCGCAAGGTCGTCCCATTGTATTATGTCTGTGCCACCTCATTTTCCAGTG
TTATTACGAAGATCAATTTCGCTTGTACATTTCGTCTTTCGCAGGTCAAT
AAGTAGTCGAATTCTTAGGTCACAATGATTGAGGGAAATGAAATAGATGG
AGTTGCAGTGGCCAGCAGCGAAGGAAAAAGAAACAGGAGGTGGGGATAAG
ATGAAGGGAAGGGTGGACGCAGCGAGGGAACGAGAGAGTGCGTGTGTGAT
TTAAATACGGCACAGGAGCAGGGGAGATTGGAAACCGGTCTTCGCTGTCG
TTGCTGCATTGAAACGTTTACACATCAGATGTCTGTGCTTTTCTCAGCCA
AAAACGCCCTCTTTAGATAATTTTCAACGCAACATAAACGTTACAAGGAT
GATGCTTT back to topCoding sequence (CDS) from alignment at scaffold_10:696660..700467- >mRNA_4478 ID=mRNA_4478|Name=jgi.p|Nanoce1779_2|589245|organism=Nannochloropsis oceanica|type=CDS|length=4086bp|location=Sequence derived from alignment at scaffold_10:696660..700467- (Nannochloropsis oceanica) ACGACAACTGGCAAGAGTATGAAGGAGGCCTGAGCACACATCCCATCCTG GTGAAAACGATTATCAATGTCGTGATTTACATTATCGGTGACTGGATGTC ACAAGTCGGTTGGGGCCGCACAAAAAATTTGCTTGACTTTGACCTGGCGC GCACAGCTCGTAATGGCCTCATCGGTGCTATGTTTGGGCCGCTGGTTCAC TATTATTATGATTTCTCGGATTGGCTCCTGCCGATGGACGTGCCTATTAA TAGGGTCTACAAGCTCCTCATGGATCAGTCTATTTATTTCTTTGTCAAGT GTAGCGCATACATCGCTTTGGTAGGTCTGTTGCGTGGCGATCCACCGAAG GAAGTGGTGCAGGACGTGAAAGGGCGCATTTGGCCCGTCGTTTTCCGCGG ATGGCGCTTCTGGCCAGTGGCGCACATTGTAACGTACGGCTTCATTCCTA CCCGGCATCGTGTCCTGTGGGTGAACATGCTTGACTTGCTGTGGTCCTCT ATCCTTGCCCAATTGGCCTCCAAGGAAGGGGGGGAAGAGTTGGCTGCGGC TTCGGTGGCAGTTGAAATCTCTGGGGCTGCTCCCAATGCTCTCGAAACCA GCCAGACTTCTGCTTCCGCCTTGCCTCCTTCCTGTTCTCAGATGGTTCCT AATGCATCGGTCACAGCATATTTCGCAGAGAACCGCACCGAGGAGGATGC AGCAATGCAGGAAGCGATAGCAGCAACAGCAAGAGATTCAATGCCTTCAC TGTTGCCCATCACGGCCGACGAGCTTTCCTCAGCTCCTGGGCTTGACGTT GTTAATCCTCATGACGGAGAGACAGGAGAAGAGAAAGGCGTCAACTTGCT GGTACAGTTGGGAAGAAAGGAGGCGGGGGGGCGGTGAAACTCGAGCCTTA TCACGGCAGCTTTGCGATTTCTTGAGGGCGAACCCATGGACAAGCAGATC TTGAAAAAATGGCTCAATCTGGTGCTCTTGGTCGCAGCGGGAGTCTATGG CACCTCGCTCCTCGTCACCGTGGACATGGATAACTGGCGGGGTTGGACCT TGCAAGAAATCATGCTCCGTATTCCCTATGGTCCCGCGCCGAATCCAGGC CTTTATGGGGATGGTGTTAGCGTGCAGCAGTATAACGTGCCCAATCATGG CCTTTGTGTCCTTTCCTGCACGAGGTCCGGCCATCCTAAGCCGTGGCAGA AAAGCAGTAGCACCCCTAGCCCCTACGCATCACTACGGCCTTCCCGCTTT GTACATGCACCTGGGCAGCGAACCACCTCCGCCCACACTCGTGGAGGAGA CCAGTGCCATTCTAGACATCCCGGCGGCTTTGATTAGTAACAACTTTCCT ACCCCCAACTCGACGACAACTGGCAAGAGTATGAAGGAGGCCTGAGCACA CATCCCATCCTGGTGAAAACGATTATCAATGTCGTGATTTACATTATCGG TGACTGGATGTCACAAGTCGGTTGGGGCCGCACAAAAAATTTGCTTGACT TTGACCTGGCGCGCACAGCTCGTAATGGCCTCATCGGTGCTATGTTTGGG CCGCTGGTTCACTATTATTATGATTTCTCGGATTGGCTCCTGCCGATGGA CGTGCCTATTAATAGGGTCTACAAGCTCCTCATGGATCAGTCTATTTATT TCTTTGTCAAGTGTAGCGCATACATCGCTTTGGTAGGTCTGTTGCGTGGC GATCCACCGAAGGAAGTGGTGCAGGACGTGAAAGGGCGCATTTGGCCCGT CGTTTTCCGCGGATGGCGCTTCTGGCCAGTGGCGCACATTGTAACGTACG GCTTCATTCCTACCCGGCATCGTGTCCTGTGGGTGAACATGCTTGACTTG CTGTGGTCCTCTATCCTTGCCCAATTGGCCTCCAAGGAAGGGGGGGAAGA GTTGGCTGCGGCTTCGGTGGCAGTTGAAATCTCTGGGGCTGCTCCCAATG CTCTCGAAACCAGCCAGACTTCTGCTTCCGCCTTGCCTCCTTCCTGTTCT CAGATGGTTCCTAATGCATCGGTCACAGCATATTTCGCAGAGAACCGCAC CGAGGAGGATGCAGCAATGCAGGAAGCGATAGCAGCAACAGCAAGAGATT CAATGCCTTCACTGTTGCCCATCACGGCCGACGAGCTTTCCTCAGCTCCT GGGCTTGACGTTGTTAATCCTCATGACGGAGAGACAGGAGAAGAGAAAGG CGTCAACTTGCTGGTACAGTTGGGAAGAAAGGAGGCGGGGGGGCGGTGAA ACTCGAGCCTTATCACGGCAGCTTTGCGATTTCTTGAGGGCGAACCCATG GACAAGCAGATCTTGAAAAAATGGCTCAATCTGGTGCTCTTGGTCGCAGC GGGAGTCTATGGCACCTCGCTCCTCGTCACCGTGGACATGGATAACTGGC GGGGTTGGACCTTGCAAGAAATCATGCTCCGTATTCCCTATGGTCCCGCG CCGAATCCAGGCCTTTATGGGGATGGTGTTAGCGTGCAGCAGTATAACGT GCCCAATCATGGCCTTTGTGTCCTTTCCTGCACGAGGTCCGGCCATCCTA AGCCGTGGCAGAAAAGCAGTAGCACCCCTAGCCCCTACGCATCACTACGG CCTTCCCGCTTTGTACATGCACCTGGGCAGCGAACCACCTCCGCCCACAC TCGTGGAGGAGACCAGTGCCATTCTAGACATCCCGGCGGCTTTGATTAGT AACAACTTTCCTACCCCCAACTCGACGACAACTGGCAAGAGTATGAAGGA GGCCTGAGCACACATCCCATCCTGGTGAAAACGATTATCAATGTCGTGAT TTACATTATCGGTGACTGGATGTCACAAGTCGGTTGGGGCCGCACAAAAA ATTTGCTTGACTTTGACCTGGCGCGCACAGCTCGTAATGGCCTCATCGGT GCTATGTTTGGGCCGCTGGTTCACTATTATTATGATTTCTCGGATTGGCT CCTGCCGATGGACGTGCCTATTAATAGGGTCTACAAGCTCCTCATGGATC AGTCTATTTATTTCTTTGTCAAGTGTAGCGCATACATCGCTTTGGTAGGT CTGTTGCGTGGCGATCCACCGAAGGAAGTGGTGCAGGACGTGAAAGGGCG CATTTGGCCCGTCGTTTTCCGCGGATGGCGCTTCTGGCCAGTGGCGCACA TTGTAACGTACGGCTTCATTCCTACCCGGCATCGTGTCCTGTGGGTGAAC ATGCTTGACTTGCTGTGGTCCTCTATCCTTGCCCAATTGGCCTCCAAGGA AGGGGGGGAAGAGTTGGCTGCGGCTTCGGTGGCAGTTGAAATCTCTGGGG CTGCTCCCAATGCTCTCGAAACCAGCCAGACTTCTGCTTCCGCCTTGCCT CCTTCCTGTTCTCAGATGGTTCCTAATGCATCGGTCACAGCATATTTCGC AGAGAACCGCACCGAGGAGGATGCAGCAATGCAGGAAGCGATAGCAGCAA CAGCAAGAGATTCAATGCCTTCACTGTTGCCCATCACGGCCGACGAGCTT TCCTCAGCTCCTGGGCTTGACGTTGTTAATCCTCATGACGGAGAGACAGG AGAAGAGAAAGGCGTCAACTTGCTGGTACAGTTGGGAAGAAAGGAGGCGG GGGGGCGGTGAAACTCGAGCCTTATCACGGCAGCTTTGCGATTTCTTGAG GGCGAACCCATGGACAAGCAGATCTTGAAAAAATGGCTCAATCTGGTGCT CTTGGTCGCAGCGGGAGTCTATGGCACCTCGCTCCTCGTCACCGTGGACA TGGATAACTGGCGGGGTTGGACCTTGCAAGAAATCATGCTCCGTATTCCC TATGGTCCCGCGCCGAATCCAGGCCTTTATGGGGATGGTGTTAGCGTGCA GCAGTATAACGTGCCCAATCATGGCCTTTGTGTCCTTTCCTGCACGAGGT CCGGCCATCCTAAGCCGTGGCAGAAAAGCAGTAGCACCCCTAGCCCCTAC GCATCACTACGGCCTTCCCGCTTTGTACATGCACCTGGGCAGCGAACCAC CTCCGCCCACACTCGTGGAGGAGACCAGTGCCATTCTAGACATCCCGGCG GCTTTGATTAGTAACAACTTTCCTACCCCCAACTCG back to top
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