Properties
| Property Name | Value |
|---|
| TranscriptId | 24744 |
| Track | FilteredModels2 |
| ProteinId | 24658 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:655173..656415 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4462 ID=mRNA_4462|Name=jgi.p|Nanoce1779_2|24658|organism=Nannochloropsis oceanica|type=mRNA|length=1065bp
TAATTAATGCCCTGTCTTTCCTAAACTGCAACTTATTTTCGTCAAGGCAG
GCCCAAAGGCAAAAGAGATCTGGGGGGGCATTGAAGCTCTTTGTCTAAAC
GTCGCGCCTGTGGGTACTGCATGATCAATGATGAACTTATTCTTATCCAT
TTCACGACAAAGATTCCCCACCGCCTACTTCGGTAAACATATAAATTCTG
CTATCGTAGTCATGATGCAGGGAAACCTCGTCGGCAGCACCTTGGTGCTC
GTTGCTTGGAGCTACGTAATTGGACCCCGGTCCGTCCTAGCGCAGGGTAA
CAATAATCAGATTGACCCTTATGGGGGCAACTATGGGGATGGGAACAGGG
GCCAAGGGGCGTACACGCCCGTGCCCTCTCCTACGTACGGTGGCAATGAC
GAAGAGCAAGGAGGAGGCAAACCGTCCCCTGCGCCTACTCCACGTCCCAC
GCCTGCCCCTACGCCCGCCTCTGTGTCGGCTCTCACTTCATCCAATGCCG
CTTCGGCGTTGAAGGTAGAGCTTATCAATAACAACTCTTGGACTGACGCG
ACTTCAGGAAAGAAGTTTGAGCAAAATAATTATCTGTTGCGAAATACTGG
GGATCGAGACGTGTGTGGCATGGTAATGACTGCTCCCCTTAACTCGAATT
TGACCAAGGGAAGTAATGTCACCCGTCGGCCGCCATTTTATAGCTCTTAC
AATGTTCAGTCTTGTAATGTATCGGCTGGACAAATGGAACTTCGTTTTCC
GACTTGGGCGGACATTGTCTATAAAAAAGGTGGGGTCGTTCCGTTTGGAT
ACATTATTCATGGCTACTGGAATGGGAGTGCCACGGAGGGTCCCGCCACG
GTCGAACACGCTCGTTTCTGCGATGATGGTGACAATGAGACCGGCAATGG
GCGCATGTTGCGTTTGCGACGGGATTTTTATGAGCGACGGCACCATCACC
GCAAGTTGGAGGAGGAGAAGCGTGCCTAGGAGTACGGAAAGATAGCGTTG
GCCTCTGACAGAAGATTTTGCAATTTTACATGAAAAGAAGAGGATTCGCA
AACAAAAAAGACACT back to topprotein sequence of jgi.p|Nanoce1779_2|24658 >mRNA_4462-protein ID=mRNA_4462-protein|Name=jgi.p|Nanoce1779_2|24658|organism=Nannochloropsis oceanica|type=polypeptide|length=284bp
MMNLFLSISRQRFPTAYFGKHINSAIVVMMQGNLVGSTLVLVAWSYVIGP
RSVLAQGNNNQIDPYGGNYGDGNRGQGAYTPVPSPTYGGNDEEQGGGKPS
PAPTPRPTPAPTPASVSALTSSNAASALKVELINNNSWTDATSGKKFEQN
NYLLRNTGDRDVCGMVMTAPLNSNLTKGSNVTRRPPFYSSYNVQSCNVSA
GQMELRFPTWADIVYKKGGVVPFGYIIHGYWNGSATEGPATVEHARFCDD
GDNETGNGRMLRLRRDFYERRHHHRKLEEEKRA* back to topmRNA from alignment at scaffold_10:655173..656415+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4462 ID=mRNA_4462|Name=jgi.p|Nanoce1779_2|24658|organism=Nannochloropsis oceanica|type=mRNA|length=1243bp|location=Sequence derived from alignment at scaffold_10:655173..656415+ (Nannochloropsis oceanica)
TAATTAATGCCCTGTCTTTCCTAAACTGCAACTTATTTTCGTCAAGGCAG
GCCCAAAGGCAAAAGAGATCTGGGGGGGCATTGAAGCTCTTTGTCTAAAC
GTCGCGCCTGTGGGTACTGCATGATCAATGATGAACTTATTCTTATCCAT
TTCACGACAAAGATTCCCCACCGCCTACTTCGGTAAACATATAAATTCTG
CTATCGTAGTCATGATGCAGGGAAACCTCGTCGGCAGCACCTTGGTGCTC
GTTGCTTGGAGCTACGTAATTGGACCCCGGTCCGTCCTAGCGCAGGGTAA
CAATAATCAGATTGACCCTTATGGGGGCAACTATGGGGATGGGAACAGGG
GCCAAGGGGCGTACACGCCCGTGCCCTCTCCTACGTACGGTGGCAATGAC
GAAGAGCAAGGTGAGTAAAACGGGATGGAGCTAGGATGGGAGGGGGAAAT
ATTTGTGTGAGAGAGAGCGATGTGGCGTGCGTGTCCCCGCTATTTCATTG
GGCAATCCATTCAATCGAAATCCACCTCAATTCTCATTTTTTGATCTCCC
CCCCTTCCTCATTTTTTTTTTCAACTCGTTCCCTGCAGGAGGAGGCAAAC
CGTCCCCTGCGCCTACTCCACGTCCCACGCCTGCCCCTACGCCCGCCTCT
GTGTCGGCTCTCACTTCATCCAATGCCGCTTCGGCGTTGAAGGTAGAGCT
TATCAATAACAACTCTTGGACTGACGCGACTTCAGGAAAGAAGTTTGAGC
AAAATAATTATCTGTTGCGAAATACTGGGGATCGAGACGTGTGTGGCATG
GTAATGACTGCTCCCCTTAACTCGAATTTGACCAAGGGAAGTAATGTCAC
CCGTCGGCCGCCATTTTATAGCTCTTACAATGTTCAGTCTTGTAATGTAT
CGGCTGGACAAATGGAACTTCGTTTTCCGACTTGGGCGGACATTGTCTAT
AAAAAAGGTGGGGTCGTTCCGTTTGGATACATTATTCATGGCTACTGGAA
TGGGAGTGCCACGGAGGGTCCCGCCACGGTCGAACACGCTCGTTTCTGCG
ATGATGGTGACAATGAGACCGGCAATGGGCGCATGTTGCGTTTGCGACGG
GATTTTTATGAGCGACGGCACCATCACCGCAAGTTGGAGGAGGAGAAGCG
TGCCTAGGAGTACGGAAAGATAGCGTTGGCCTCTGACAGAAGATTTTGCA
ATTTTACATGAAAAGAAGAGGATTCGCAAACAAAAAAGACACT back to topCoding sequence (CDS) from alignment at scaffold_10:655173..656415+ >mRNA_4462 ID=mRNA_4462|Name=jgi.p|Nanoce1779_2|24658|organism=Nannochloropsis oceanica|type=CDS|length=1704bp|location=Sequence derived from alignment at scaffold_10:655173..656415+ (Nannochloropsis oceanica)
ATGATGAACTTATTCTTATCCATTTCACGACAAAGATTCCCCACCGCCTA
CTTCGGTAAACATATAAATTCTGCTATCGTAGTCATGATGCAGGGAAACC
TCGTCGGCAGCACCTTGGTGCTCGTTGCTTGGAGCTACGTAATTGGACCC
CGGTCCGTCCTAGCGCAGGGTAACAATAATCAGATTGACCCTTATGGGGG
CAACTATGGGGATGGGAACAGGGGCCAAGGGGCGTACACGCCCGTGCCCT
CTCCTACGTACGGTGGCAATGACGAAGAGCAAGGAGGAGGCAAACCGTCC
CCTGCGCCTACTCCACGTCCCACGCCTGCCCCTACGCCCGCCTCTGTGTC
GGCTCTCACTTCATCCAATGCCGCTTCGGCGTTGAAGGTAGAGCTTATCA
ATAACAACTCTTGGACTGACGCGACTTCAGGAAAGAAGTTTGAGCAAAAT
AATTATCTGTTGCGAAATACTGGGGATCGAGACGTGTGTGGCATGGTAAT
GACTGCTCCCCTTAACTCGAATTTGACCAAGGGAAGTAATGTCACCCGTC
GGCCGCCATTTTATAGCTCTTACAATGTTCAGTCTTGTAATGTATCGGCT
GGACAAATGGAACTTCGTTTTCCGACTTGGGCGGACATTGTCTATAAAAA
AGGTGGGGTCGTTCCGTTTGGATACATTATTCATGGCTACTGGAATGGGA
GTGCCACGGAGGGTCCCGCCACGGTCGAACACGCTCGTTTCTGCGATGAT
GGTGACAATGAGACCGGCAATGGGCGCATGTTGCGTTTGCGACGGGATTT
TTATGAGCGACGGCACCATCACCGCAAGTTGGAGGAGGAGAAGCGTGCCT
AGATGATGAACTTATTCTTATCCATTTCACGACAAAGATTCCCCACCGCC
TACTTCGGTAAACATATAAATTCTGCTATCGTAGTCATGATGCAGGGAAA
CCTCGTCGGCAGCACCTTGGTGCTCGTTGCTTGGAGCTACGTAATTGGAC
CCCGGTCCGTCCTAGCGCAGGGTAACAATAATCAGATTGACCCTTATGGG
GGCAACTATGGGGATGGGAACAGGGGCCAAGGGGCGTACACGCCCGTGCC
CTCTCCTACGTACGGTGGCAATGACGAAGAGCAAGGAGGAGGCAAACCGT
CCCCTGCGCCTACTCCACGTCCCACGCCTGCCCCTACGCCCGCCTCTGTG
TCGGCTCTCACTTCATCCAATGCCGCTTCGGCGTTGAAGGTAGAGCTTAT
CAATAACAACTCTTGGACTGACGCGACTTCAGGAAAGAAGTTTGAGCAAA
ATAATTATCTGTTGCGAAATACTGGGGATCGAGACGTGTGTGGCATGGTA
ATGACTGCTCCCCTTAACTCGAATTTGACCAAGGGAAGTAATGTCACCCG
TCGGCCGCCATTTTATAGCTCTTACAATGTTCAGTCTTGTAATGTATCGG
CTGGACAAATGGAACTTCGTTTTCCGACTTGGGCGGACATTGTCTATAAA
AAAGGTGGGGTCGTTCCGTTTGGATACATTATTCATGGCTACTGGAATGG
GAGTGCCACGGAGGGTCCCGCCACGGTCGAACACGCTCGTTTCTGCGATG
ATGGTGACAATGAGACCGGCAATGGGCGCATGTTGCGTTTGCGACGGGAT
TTTTATGAGCGACGGCACCATCACCGCAAGTTGGAGGAGGAGAAGCGTGC
CTAG back to top
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