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Properties
| Property Name | Value |
|---|
| TranscriptId | 555351 |
| Track | FilteredModels2 |
| ProteinId | 555265 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:649380..650653 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4459 ID=mRNA_4459|Name=jgi.p|Nanoce1779_2|555265|organism=Nannochloropsis oceanica|type=mRNA|length=872bp
TGATCAGGCACCCACACTCTCATAGAATTCGGCGTCTTCCGCCAACAAAA
ATATGCAGCCTCCAGCGATCAAATGATCAAAATTGAGATGAATAGCGTCG
CTTTTACACGCTCACGCTCACGCTCTGCCTGTCTTTATACAGATACTCCA
TTGAGGGATTCTACCAGAATGGTAGCCTGTGGTGGGCTTTGATTGGCGCT
CCCCCACTCCGACTATACCATGCAGCATCATCGCAAACGACTTCATCACA
ACACCATCATCATCATCATCGTCTTTCAACAGGTGCTTACATGTCGTCGG
CCAGTAGCCGCTCTGCGGCCACGCGCGCGGGGGACCAAGCCTGGGCCAAG
ATGAGCAAGATGAACGCCGAATTGTTCAACCTCACATATGGAGCCATGAT
CATGCAGCTGATTCGGGACTACGAGGATGTACAAGATGTGAACCAACAGC
TGGAAAAAATGGGCTACAACATTGGACAAAAGCTCATCGACGAATTTCTC
GCCAAGTCCGGCGTGGGCAACTGTGGGAACATCCGAGAGGTCGCCGAAGC
GGTGGCCAAGGTGGGATTCAAGATGTTCTTGGGCGTGGTAGTGGAAGTAA
CAAATTGGAATAACGAGGGCACGGCGTTCAGTTTGCAGGTGTATGACAAT
CCGCTCGCGGATTATGTCGAGCTTCCGCCGCAGTACTCTGGGTTGGTGTA
CTCGAACTTGTTGTGTGGGGTGATAAGAGGGGCGTTGGAAATGATCAAAT
ATCGGGTGGAGTGTCGGTTCGTGAAGGACGGGCTGAAGGGAGATGAGGTG
AATGAGATCCGCGTGGAGTTGAAGCAGATATTGGAGGAGAGCTTTGGGGA
GGAGTATAATGAGGGGGGCTGA back to topprotein sequence of jgi.p|Nanoce1779_2|555265 >mRNA_4459-protein ID=mRNA_4459-protein|Name=jgi.p|Nanoce1779_2|555265|organism=Nannochloropsis oceanica|type=polypeptide|length=194bp
MSSASSRSAATRAGDQAWAKMSKMNAELFNLTYGAMIMQLIRDYEDVQDV
NQQLEKMGYNIGQKLIDEFLAKSGVGNCGNIREVAEAVAKVGFKMFLGVV
VEVTNWNNEGTAFSLQVYDNPLADYVELPPQYSGLVYSNLLCGVIRGALE
MIKYRVECRFVKDGLKGDEVNEIRVELKQILEESFGEEYNEGG* back to topmRNA from alignment at scaffold_10:649380..650653+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4459 ID=mRNA_4459|Name=jgi.p|Nanoce1779_2|555265|organism=Nannochloropsis oceanica|type=mRNA|length=1274bp|location=Sequence derived from alignment at scaffold_10:649380..650653+ (Nannochloropsis oceanica)
TGATCAGGCACCCACACTCTCATAGAATTCGGCGTCTTCCGCCAACAAAA
ATATGCAGCCTCCAGCGATCAAATGATCAAAATTGAGATGAATAGCGTCG
CTTTTACACGCTCACGCTCACGCTCTGCCTGTCTTTATACAGATACTCCA
TTGAGGGATTCTACCAGAATGGTAGCCTGTGGTGGGCTTTGATTGGCGCT
CCCCCACTCCGACTATACCATGCAGCATCATCGCAAACGACTTCATCACA
ACACCATCATCATCATCATCGTCTTTCAACAGGTGCTTACATGTCGTCGG
CCAGTAGCCGCTCTGCGGCCACGCGCGCGGGGGACCAAGCCTGGGCCAAG
ATGAGCAAGATGGTATGTTTGCAAGGGGAAAGTGGTCACTGCTTTTGCCC
TTGTCTCCTCTGCCCTCTGAGCCTCCTCTTCATGCCGACCTCCCCACCTC
CCTCCCTTCACAGAACGCCGAATTGTTCAACCTCACATATGGAGCCATGA
TCATGCAGCTGATTCGGGACTACGAGGATGTACAAGATGTGAACCAACAG
CTGGAAAAAATGTACGTGTGTCATGGATAGTAGTTTGCGCGAGTGGGCTG
GCTTGGATATACTTTTCTTTCCTCCTTTCCTCACGGTCTCGTGTAAGCGA
CATAAGTTTGTAAATGTGACTTTATATTGCATGGGTCTTGTCTTTATGTG
TGTACATACCTTTTTCGGTCCTGTACCCCTCTTCCGTTTTTTCTTCGGCC
AGTTTTGGCGCCAACGCTCCGCCAACGATTTTCTTTCGACTATCCCTTTG
GCTCGACCAACCATGGACAGCCCATGTTCTCACTTTGGGTTATCATATAC
TTTTTGAACAAGGGGCTACAACATTGGACAAAAGCTCATCGACGAATTTC
TCGCCAAGTCCGGCGTGGGCAACTGTGGGAACATCCGAGAGGTCGCCGAA
GCGGTGGCCAAGGTGGGATTCAAGATGTTCTTGGGCGTGGTAGTGGAAGT
AACAAATTGGAATAACGAGGGCACGGCGTTCAGTTTGCAGGTGTATGACA
ATCCGCTCGCGGATTATGTCGAGCTTCCGCCGCAGTACTCTGGGTTGGTG
TACTCGAACTTGTTGTGTGGGGTGATAAGAGGGGCGTTGGAAATGATCAA
ATATCGGGTGGAGTGTCGGTTCGTGAAGGACGGGCTGAAGGGAGATGAGG
TGAATGAGATCCGCGTGGAGTTGAAGCAGATATTGGAGGAGAGCTTTGGG
GAGGAGTATAATGAGGGGGGCTGA back to topCoding sequence (CDS) from alignment at scaffold_10:649380..650653+ >mRNA_4459 ID=mRNA_4459|Name=jgi.p|Nanoce1779_2|555265|organism=Nannochloropsis oceanica|type=CDS|length=1746bp|location=Sequence derived from alignment at scaffold_10:649380..650653+ (Nannochloropsis oceanica)
ATGTCGTCGGCCAGTAGCCGCTCTGCGGCCACGCGCGCGGGGGACCAAGC
CTGGGCCAAGATGAGCAAGATGAACGCCGAATTGTTCAACCTCACATATG
GAGCCATGATCATGCAGCTGATTCGGGACTACGAGGATGTACAAGATGTG
AACCAACAGCTGGAAAAAATGGGCTACAACATTGGACAAAAGCTCATCGA
CGAATTTCTCGCCAAGTCCGGCGTGGGCAACTGTGGGAACATCCGAGAGG
TCGCCGAAGCGGTGGCCAAGGTGGGATTCAAGATGTTCTTGGGCGTGGTA
GTGGAAGTAACAAATTGGAATAACGAGGGCACGGCGTTCAGTTTGCAGGT
GTATGACAATCCGCTCGCGGATTATGTCGAGCTTCCGCCGCAGTACTCTG
GGTTGGTGTACTCGAACTTGTTGTGTGGGGTGATAAGAGGGGCGTTGGAA
ATGATCAAATATCGGGTGGAGTGTCGGTTCGTGAAGGACGGGCTGAAGGG
AGATGAGGTGAATGAGATCCGCGTGGAGTTGAAGCAGATATTGGAGGAGA
GCTTTGGGGAGGAGTATAATGAGGGGGGCTGAATGTCGTCGGCCAGTAGC
CGCTCTGCGGCCACGCGCGCGGGGGACCAAGCCTGGGCCAAGATGAGCAA
GATGAACGCCGAATTGTTCAACCTCACATATGGAGCCATGATCATGCAGC
TGATTCGGGACTACGAGGATGTACAAGATGTGAACCAACAGCTGGAAAAA
ATGGGCTACAACATTGGACAAAAGCTCATCGACGAATTTCTCGCCAAGTC
CGGCGTGGGCAACTGTGGGAACATCCGAGAGGTCGCCGAAGCGGTGGCCA
AGGTGGGATTCAAGATGTTCTTGGGCGTGGTAGTGGAAGTAACAAATTGG
AATAACGAGGGCACGGCGTTCAGTTTGCAGGTGTATGACAATCCGCTCGC
GGATTATGTCGAGCTTCCGCCGCAGTACTCTGGGTTGGTGTACTCGAACT
TGTTGTGTGGGGTGATAAGAGGGGCGTTGGAAATGATCAAATATCGGGTG
GAGTGTCGGTTCGTGAAGGACGGGCTGAAGGGAGATGAGGTGAATGAGAT
CCGCGTGGAGTTGAAGCAGATATTGGAGGAGAGCTTTGGGGAGGAGTATA
ATGAGGGGGGCTGAATGTCGTCGGCCAGTAGCCGCTCTGCGGCCACGCGC
GCGGGGGACCAAGCCTGGGCCAAGATGAGCAAGATGAACGCCGAATTGTT
CAACCTCACATATGGAGCCATGATCATGCAGCTGATTCGGGACTACGAGG
ATGTACAAGATGTGAACCAACAGCTGGAAAAAATGGGCTACAACATTGGA
CAAAAGCTCATCGACGAATTTCTCGCCAAGTCCGGCGTGGGCAACTGTGG
GAACATCCGAGAGGTCGCCGAAGCGGTGGCCAAGGTGGGATTCAAGATGT
TCTTGGGCGTGGTAGTGGAAGTAACAAATTGGAATAACGAGGGCACGGCG
TTCAGTTTGCAGGTGTATGACAATCCGCTCGCGGATTATGTCGAGCTTCC
GCCGCAGTACTCTGGGTTGGTGTACTCGAACTTGTTGTGTGGGGTGATAA
GAGGGGCGTTGGAAATGATCAAATATCGGGTGGAGTGTCGGTTCGTGAAG
GACGGGCTGAAGGGAGATGAGGTGAATGAGATCCGCGTGGAGTTGAAGCA
GATATTGGAGGAGAGCTTTGGGGAGGAGTATAATGAGGGGGGCTGA back to top
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