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Properties
| Property Name | Value |
|---|
| TranscriptId | 589251 |
| Track | FilteredModels2 |
| ProteinId | 589165 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:625381..630848 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4451 ID=mRNA_4451|Name=jgi.p|Nanoce1779_2|589165|organism=Nannochloropsis oceanica|type=mRNA|length=853bp
AACAATCCTTAAAGCAAGAAGGCACAGCTATGAACACAATCCCGCCAACA
AAGAAAAAAAGAGCAACACCCCCTTATCGTGTCGTCGTGCTCCTCTTTGC
GTCAACCCTGCCCCTCTGTCAAGGCTGGTTTCCTCGTCTCTGCAATGCCC
CTCCCTCATCCTCACGACCTCACGCTTCGCGTCGTGCCCGGGGCCTTGTG
CTGTGTGTGCAGGGAGGGGGCGGTCCCATAGGGATAGGATGGGTTGGCGA
CCGATATTCGTGGACGGAGAACGATTGGGAACTGGAAGTCACGGTGCCCG
TCCCACCGGAAACGCGCAAGGAGGATGTGCTGTTCAAAGCGGCAGCCACG
AGTCTCAAGCTGGGGTTGGTGAATAGCACAGAGATGTTGTTGGGTGGAAA
GCTCAAGGGGCGGATTGCCTTGGACGGCACCTATTGGAGCTTGGAAGGCT
TTGGTCCCGAGCGGGCAGTGAAGCTGCTACTAGAAAAGAAAGAGGGTGCC
TTGGAAAATAATATGGACTGGCGGCGAGTCTTGGCGGAGGAAGCCGCAAC
AGAGACTCAGTACCAGGAGGCAGAGAAGTTCGACACGCAGGAATATGTAC
ACCAGATGTTGGGACCTGGGGGTGTGAATATGAGTTTAGTGGACAAGGAG
ATGTTTGGAGGGTTGGCGGGGGGGGTGATGCGGAATGTGAGTAGAGACAC
CCTCAGGGAGTTTGTGGAGGCCAAGGTTTTGGGTGATGCTTCGGGGCTAG
GGCCTAGCAATATGAAGAACGAGGATGAGGAAGAAGATGATGTTGATGGC
AAGTAATACGCGACAGCGAAAAGGAAAAGTAACTTTAGAAGCGAAGAAAC
GGA back to topprotein sequence of jgi.p|Nanoce1779_2|589165 >mRNA_4451-protein ID=mRNA_4451-protein|Name=jgi.p|Nanoce1779_2|589165|organism=Nannochloropsis oceanica|type=polypeptide|length=259bp
MNTIPPTKKKRATPPYRVVVLLFASTLPLCQGWFPRLCNAPPSSSRPHAS
RRARGLVLCVQGGGGPIGIGWVGDRYSWTENDWELEVTVPVPPETRKEDV
LFKAAATSLKLGLVNSTEMLLGGKLKGRIALDGTYWSLEGFGPERAVKLL
LEKKEGALENNMDWRRVLAEEAATETQYQEAEKFDTQEYVHQMLGPGGVN
MSLVDKEMFGGLAGGVMRNVSRDTLREFVEAKVLGDASGLGPSNMKNEDE
EEDDVDGK* back to topmRNA from alignment at scaffold_10:625381..630848+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4451 ID=mRNA_4451|Name=jgi.p|Nanoce1779_2|589165|organism=Nannochloropsis oceanica|type=mRNA|length=5468bp|location=Sequence derived from alignment at scaffold_10:625381..630848+ (Nannochloropsis oceanica)
AACAATCCTTAAAGCAAGAAGCTAAAGCAACGAAGACAAGCTTCAATGTC
AATCAATCATGTCCAATGCCGTCTTATTAAAGTTTTTGGCGCTTTTTCTC
CTGTTTCGATTCCTATTGATGCCATCACATGTATTTCTCCTCTTTGGAAT
TGTCGTATTTTATTTTTAAAACTCCAATTACTGAAACTTCCTACAAACAA
AATACGCACAAATACATTCTTCGTTATATCATCTTTACGACCTTGCTTCC
CAGCCCCCCAAAGTCAGCCAGCAATCCTGCATCTACCCCTTCCCATGCCC
TCCCTCCTTCCCATCCCCCCTTTTCAAGTTTTCCCTCAGGGAACCGCAGT
ACTCTACCCGTGTAGATGCACGCGCAAACCACTGCCGCAAAAGCAATCAA
ACATATCGCCAAAATAAACACAGCTCCACCCCCTTCAGGAATCGCCAGGC
GCTCGTCCAATCCATGCACACCGCCTGCACCATGCCGTGCTTGTCCACCA
GTGATGCTGCCCTTCGACCCTCTCCCCTTCTTATCTGAAACCCGCTTCCC
CCTCATGCCCGCGAGCGCCCTAGTTTTATCCGATATTCTCTTCGCCTTGG
CCTGGGCCTCCCTCCTATCTTCCACGTACCAATCATCGTCCTCCCCCTCC
TCAAAGGGCACCCACTGCAATTTCCCACAATTATCAAAATCAATCTTAGA
ATTCCGAGTATCAACCCCCGTGAACGCAATCAATTGGTTTAAACTCCTCT
TTTCACCCAAATCCCACCTCCCCAACATCTCTTTCGCCTCAGGCGTATCT
CTCTTGATATGCGCGTCGGGATCACCGAGGAGGGTGCGGAGCCTGTCATG
CGAACGTTTTAGCTCGCGATGTTTCCGAGACCACGCGTTGGCGCGCTTGG
TCTGTGGACCATGGGTATAGTCGTGGTAGACGATGCTTCGGTGCGGCGTG
TAGGTATCGTAGCCACTGGGGTAGAAACGGGGATTAAGAGAGAAGGGGTT
AAAAAGGTATATACTTTACTTGCACTCGGACAGGGGGGGGGAGGTGGGGG
GCAGAGGAGGGAGAACAGGACTTCGTATGAAGTGTCAAAATGAAGAGGGA
TTGACGTACCGTGTCCACATCCTTGCATATTTCGAATACTCCTCGCCGTC
GAACAAGGAGGGTAGATGCGGGTCATACGGCGCCTTCAAATCCGCGTGGC
ACTTGTTAAACGAAAAGCCTGCCGCCCACGATGCCGTCAGCTTGGGTTTG
CTCAGCCAAATGCAATTTGTCGCTTGTTCGTTACGAACCATGTTTTCGGG
CTTTGTGTACAGAACTTTACAGATCTGCGGGACTTCATATCGGTTATTGA
GGTTGAGGTGGAGCTGGTCGAAGTTGGGCACATAGGTGGTGAGCACGCCG
TACTCATTGTTCGTCAGTCCTGGAGGGGGAAAGAGTGTGAAGGAGAAGGG
GGGATAGTGTGAGAATTTTGCAAAATTGCAACAGCAACAACCACCCATGC
TCTGCCGCGTATATGCTCCACACACAGACACATACACACGAACACTCCTT
ATACCCACTCACCCCACATGTCCAAAAGCTGCTTATCCCAGTCATCCTCG
AAATCCATATGCGCATCGATTTGCATGCAAAATTCCTCACTGCCCAGCAG
CTTGCTCCCTAGATACCGCCCATATGTTGGCCCTTTGGCATCTTCACTAG
ACACGCGCAGCATCCTAACTTGATCTGCGTGAGGGCAATTCTCCAAGACC
TTGGCTGCCGGTCCTGTTGCGGGCGTTTTCGGCTCAAGTCCACGTTCTTC
TTTGATCATCTCGCAATAGCCATAGAGGCAGTCGGCGTCATCGTGGCTGT
TTTGCTGAACAACACCTGCGAAGACGCGGTTGGGGTTGGTGGCTTTGCTG
TGGTTGGGGATGTGGAGCGGCATATTGGAAAGGGAAGGGAAGACAGCGAT
TTGAGGTAAGAAACAATGAAGGCGAAACCTTGTTCAGGGTGTGGAACGAC
ATGGCGAGGAGGTGCAAGGTCCCCCCCCCACTCCACCCCCCCCACGCTAT
TATTTCAAACTTTACTCTGAATCTTCTTCCAAAGTTGGGACCGAGCGAGA
ATTGAAAAGCATGCACACATCAATTAATTCGTACAAGACATGTGCATCCC
AATTATTTTCCCTCTCTTCCCTCAGTGCGTACGTAAAAAGGTTGTAGAGC
GTCTTGGGGCACCGGTAATCCCGAAATGAGGAGATGGAGACCATGATGCT
TGTGTCATTCTGCATCCACGAGTCCGTCCGTGGTGGATAAGGTTGTGGCA
CGCCAGCCTCGTCGTTCTCGTCGAATGGCGTCCACTGTCCCTTGACGAAG
ACTGCCGATTTGCCCCATTTGCCGGGCTCCGCCGGCACGAGTTCCATTAC
TCCTAACAACAACAACAGCAGCATCCCATATGAATAGGGCACCGCCGTCC
TTCCTCTTGGCATAGTGGATAGGACAGCGATGCGTGTCTACCTATGCAGT
GTGTTGTGGTGATAGGGAGGAGCAGGAATTATCAGTGTGTGATAAACGCA
GGCAGAGAACACTTTGAAATCAGCCCTGAATTTGAATTACGACAGTGGTG
CCTGGTGGGCGAAAGGCAAATCGATGATGGTTCACTTCATTCGAGAAGGC
CATTAGACTACGTCCGCTCATCGTCATGTGGCATGAGCACTCCTTACGTG
CTTGCTACTGAAATAGGAAATGGATTATTTTTAGTTTTCTGGGTTTGGGC
ATTATTATTGTGTGACCCTTGACCAACCTCAAAACACCTGTCAAAGTCGC
TAGTAAAACTCGGACGAGGAATAAGGGATGACAACATTTTATTGTTGGAA
GGCTCCCCCTCGTATGCAAGTCCTCGAAGACGCAGGTTGCATGCGATAGT
TCTAGAGGGATGTAGGAACGCCCAAAAAGAACTACACATTACAAAGATTT
TTTATTTTTATTTTTATACTTTATACTTTATACTTTACTTTACTTTATTT
ATACTTTATATAGTTCACTTTACTTTACTTAAGTTGACAATGGGCAAGCT
ACAGCGCGGCTGTTGGCAGAACGGTAGATATGGAAGCTTATCGTGAGTGC
CCTCCATTCTTCCATGTCAGGAATGGGTCGGAATCTGGAGAGCAGGCAGA
CAAAAACTTTCCCGGAAATTGCCTTGTTCGCTGAATCGTTGTAGGTGGAA
GAACCGCAATAGGTGCATGGGGGGGGCGTGGGGGGGGCGTGACTTGCAGA
AAAGTATGCTCATGCATTTCCGGTTAATTTTTTGACAAGCTGAAGGAGGA
GAAGGAGGACCGAGGCGTGGCGCTGGCGCTCGCTCTAGATGTCATTATTG
TTTGATTTATGGCAAAGAGAGGTTTCCTTTGGACGTTACCCTCAGTATCA
ACCTCTTTTAGATGAACTGTCAGGTAGAAATCTTTCGTTCCTTCTTTTTT
CGTTTTTCAGGCAGATTTTTCTATGGACAAACGGAAATGAGATGAACACA
CACTCACACGTACACACACAACTCTTACTTCATGTACCGCTGCAAGAAAG
CCTTGTGGAACGGATTGCGGATCGTATCGTTTACAAACTTCTTCTTCTTC
TCCGTCTCCCCCCGAGATTGGTTCTTGAAGACCACGTCGTCGTTCCATTT
ACGCTTGATCTGTGCACTACCAGTACCACTTGCTAGGAGCGGGTTTCCCT
TCAAGGCCGCCGCATTGATTTCATCCTCCTTCATTCGGGCTGCCTCGGCC
TTGTCCTCATCCTCCTGCTTCCGACGAGCCTCTTCCCGCTCCTGCTTGAT
TTTTTCCAACTCCAAACGTAACAGGTCTTCGTCGTCGTCGTCATCGTCAT
CGTCGCTGTCGTCGCTGCTATCCAAATCACTCTCAATCCCGGTCCCACCC
ACCCCGCCCGCATCATCATCGTCATCATTCGCCTCATCATCGCGATCGTC
AAAGCGCTGGGTGGCTTGGCGAAGTTCTTCTTTGTCCTTGAGCAACAAGG
GCGTGGCTGCGGCCTCTCCCGCCTCCAACCGCCGCAGCTCTTCGCGGGCG
CCCAAATCCCCTCCCTTGCCACGTTCCTGCAGCTTGGCCATGTGTGCCGC
CCGCTCCTTCTCGTCCAGCACGCTCCGCAAATCCTTTTTGCGCAACTCCG
CCGCCGTGTTTTGGCCCGTTTTCCGATACTTGAGGGTCTTGTGCGCGGGC
ATGTCAAGGACAGAAAATTGCCGGGACGTCTGCCCGCCGAGGCTCCAGCT
GCCCAGGTCAGAGGCCCCCCCCTGCTTAGAGTTCCATGTTGATTTGGCTG
CCGTTGTCATGGTGATGCGGTAGTCCTGTGATTTGCGAAGCGAGGGAGCA
GAGGTGGTTAGTGGAGGGATTGCGGTATGGCTACTGGAGCAGACAGTAAG
GAAGGGATCCTCCAAATTGTCAGTCTTCGGCAAACATAAGTCACCACTTC
CCCCACGATTACCATGATGGGATGGTGCGCAGAGATCACGCATTGCTGCT
TAATTTAGTCCTTCGGGACGCACGCTCAAGCAAACTCACAGACTAGCTCT
AGAGACAAGTAAGCTTCCGCCTCATCATCGCTGAGACGACCTCGCAGTTG
CCATACCCACGTCCTGAACCATATATCAATATACACGCACAGCTATGAAC
ACAATCCCGCCAACAAAGAAAAAAAGAGCAACACCCCCTTATCGTGTCGT
CGTGCTCCTCTTTGCGTCAACCCTGCCCCTCTGTCAAGGCTGGTTTCCTC
GTCTCTGCAATGCCCCTCCCTCATCCTCACGACCTCACGCTTCGCGTCGT
GCCCGGGGCCTTGTGCTGTGTGTGCAGGGAGGGGGCGGTCCCATAGGGAT
AGGATGGGTTGGCGACCGATATTCGTGGACGGAGAACGATTGGGAACTGG
AAGTCACGGTGCCCGTCCCACCGGAAACGCGCAAGGAGGATGTGCTGTTC
AAAGCGGCAGCCACGAGTCTCAAGCTGGGGTTGGTGAATAGCACAGAGAT
GTTGTTGGGTGGAAAGCTCAAGGGGCGGATTGCCTTGGACGGCACCTATT
GGAGCTTGGAAGGCTTTGGTCCCGAGCGGGCAGTGAAGCTGCTACTAGAA
AAGAAAGAGGGTGCCTTGGAAAATAATATGGACTGGCGGCGAGTCTTGGC
GGAGGAAGCCGCAACAGAGACTCAGTACCAGGAGGCAGAGAAGTTCGACA
CGCAGGAATATGTACACCAGATGTTGGGACCTGGGGGTGTGAATATGAGT
TTAGTGGACAAGGAGATGTTTGGAGGGTTGGCGGGGGGGGTGATGCGGAA
TGTGAGTAGAGACACCCTCAGGGAGTTTGTGGAGGCCAAGGTTTTGGGTG
ATGCTTCGGGGCTAGGGCCTAGCAATATGAAGAACGAGGATGAGGAAGAA
GATGATGTTGATGGCAAGTAATACGCGACAGCGAAAAGGAAAAGTAACTT
TAGAAGCGAAGAAACGGA back to topCoding sequence (CDS) from alignment at scaffold_10:625381..630848+ >mRNA_4451 ID=mRNA_4451|Name=jgi.p|Nanoce1779_2|589165|organism=Nannochloropsis oceanica|type=CDS|length=777bp|location=Sequence derived from alignment at scaffold_10:625381..630848+ (Nannochloropsis oceanica)
ATGAACACAATCCCGCCAACAAAGAAAAAAAGAGCAACACCCCCTTATCG
TGTCGTCGTGCTCCTCTTTGCGTCAACCCTGCCCCTCTGTCAAGGCTGGT
TTCCTCGTCTCTGCAATGCCCCTCCCTCATCCTCACGACCTCACGCTTCG
CGTCGTGCCCGGGGCCTTGTGCTGTGTGTGCAGGGAGGGGGCGGTCCCAT
AGGGATAGGATGGGTTGGCGACCGATATTCGTGGACGGAGAACGATTGGG
AACTGGAAGTCACGGTGCCCGTCCCACCGGAAACGCGCAAGGAGGATGTG
CTGTTCAAAGCGGCAGCCACGAGTCTCAAGCTGGGGTTGGTGAATAGCAC
AGAGATGTTGTTGGGTGGAAAGCTCAAGGGGCGGATTGCCTTGGACGGCA
CCTATTGGAGCTTGGAAGGCTTTGGTCCCGAGCGGGCAGTGAAGCTGCTA
CTAGAAAAGAAAGAGGGTGCCTTGGAAAATAATATGGACTGGCGGCGAGT
CTTGGCGGAGGAAGCCGCAACAGAGACTCAGTACCAGGAGGCAGAGAAGT
TCGACACGCAGGAATATGTACACCAGATGTTGGGACCTGGGGGTGTGAAT
ATGAGTTTAGTGGACAAGGAGATGTTTGGAGGGTTGGCGGGGGGGGTGAT
GCGGAATGTGAGTAGAGACACCCTCAGGGAGTTTGTGGAGGCCAAGGTTT
TGGGTGATGCTTCGGGGCTAGGGCCTAGCAATATGAAGAACGAGGATGAG
GAAGAAGATGATGTTGATGGCAAGTAA back to top
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