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Properties
| Property Name | Value |
|---|
| TranscriptId | 551246 |
| Track | FilteredModels2 |
| ProteinId | 551160 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:1099132..1100249 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_445 ID=mRNA_445|Name=jgi.p|Nanoce1779_2|551160|organism=Nannochloropsis oceanica|type=mRNA|length=865bp
CAGGATCAGCCCCCCACCTCGCAACCGAGGTAATGTGGCATTCACTACCA
CCATCACTACAGCAATCCCCCGGTCAGGCATGGCCCTCCAACGATACCGG
GGCCAACTCTTCAGTACAGTCACTGCCATCGCCGGGAAGTGCCGCCTATA
TATCCCACATTGACCTCGGCAAACCCTTAAACTGCATGTCTGTTGCCCGC
ATACCCGGTACTGCCGGCCTTATGGCTGCAGTGGGGGGGGCTCAAATGCT
TAAAGTCATCTCCATCTCCCCCCACGGCCTGATTGACAAAACCAACATTC
GTTTAACCAACAAAGTCACAAACGAAGTCAATTTCTCCATACATGACGTT
GAATGGTGCGTCAAAGATGCCAATCACAGCATCCTTGCTAGCGGAGCCAG
TAACGGAAATATCATCCTCTGGGATATCTCTTCCCGCGACGGCCGGGTCT
CACAAGAACGCATCTTTGCCGCCCACCCCCGAACTGTCAATCGGATCAAC
TGGCACCCACAAGAAGAGGGACTGCTGCTCTCCGCCTCCCAAGACAAGAC
CATTAAGCTTTGGGATCGACGGGGTCGCCTTCACGACTGCCAAGCCACCT
ACAACCCCCGTTCGGAATCCGTGCGGGACGTCCAATGGCAACCGTCACAA
GCCCATTACTTCGCTGCTGCCTGCGAAAGCGGCTCGGTCCAACTCTGGGA
TCGACGGATGGCGGCAGGACCGGTCTTGAAAATAATGGGCCATAATGGAT
TGGTGCTTGCGTTGGAATGGCATTTATCCGAGCCATGGGTTCTGGCGACG
GGCGCGAGAGATCGCACGGTTAAGGTTTGGGATTTTAGTGACCAGTCTGT
GCGAGGCGAAGGTGG back to topprotein sequence of jgi.p|Nanoce1779_2|551160 >mRNA_445-protein ID=mRNA_445-protein|Name=jgi.p|Nanoce1779_2|551160|organism=Nannochloropsis oceanica|type=polypeptide|length=277bp
MWHSLPPSLQQSPGQAWPSNDTGANSSVQSLPSPGSAAYISHIDLGKPLN
CMSVARIPGTAGLMAAVGGAQMLKVISISPHGLIDKTNIRLTNKVTNEVN
FSIHDVEWCVKDANHSILASGASNGNIILWDISSRDGRVSQERIFAAHPR
TVNRINWHPQEEGLLLSASQDKTIKLWDRRGRLHDCQATYNPRSESVRDV
QWQPSQAHYFAAACESGSVQLWDRRMAAGPVLKIMGHNGLVLALEWHLSE
PWVLATGARDRTVKVWDFSDQSVRGEG back to topmRNA from alignment at scaffold_3:1099132..1100249- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_445 ID=mRNA_445|Name=jgi.p|Nanoce1779_2|551160|organism=Nannochloropsis oceanica|type=mRNA|length=1118bp|location=Sequence derived from alignment at scaffold_3:1099132..1100249- (Nannochloropsis oceanica)
CAGGATCAGCCCCCCACCTCGCAACCGAGGTAATGTGGCATTCACTACCA
CCATCACTACAGCAATCCCCCGGTCAGGCATGGCCCTCCAACGATACCGG
GGCCAACTCTTCAGTACAGTCACTGCCATCGCCGGGAAGTGCCGCCTATA
TATCCCACATTGACGTAAGTGCGCTCACTTGTGACCTCTCCTCCTCCCCT
CCTTGTCATCTGTCAACTTCAGGCACTGCCTTCTTGGGTTGCAATGCGAG
TCAGACATTCGGTATACCGGGGCACCTCGTTAAAAATACACTTGTCTAAT
CCTGCACTTATCCCATAACAAGGTCTCACGCTTCATCATATCACCATGTA
AAACGGCATTCAACTTACATTCCACCAACAACCTCTTGTCATACATTCAT
TCCCAACCCCTTAACAGCTCGGCAAACCCTTAAACTGCATGTCTGTTGCC
CGCATACCCGGTACTGCCGGCCTTATGGCTGCAGTGGGGGGGGCTCAAAT
GCTTAAAGTCATCTCCATCTCCCCCCACGGCCTGATTGACAAAACCAACA
TTCGTTTAACCAACAAAGTCACAAACGAAGTCAATTTCTCCATACATGAC
GTTGAATGGTGCGTCAAAGATGCCAATCACAGCATCCTTGCTAGCGGAGC
CAGTAACGGAAATATCATCCTCTGGGATATCTCTTCCCGCGACGGCCGGG
TCTCACAAGAACGCATCTTTGCCGCCCACCCCCGAACTGTCAATCGGATC
AACTGGCACCCACAAGAAGAGGGACTGCTGCTCTCCGCCTCCCAAGACAA
GACCATTAAGCTTTGGGATCGACGGGGTCGCCTTCACGACTGCCAAGCCA
CCTACAACCCCCGTTCGGAATCCGTGCGGGACGTCCAATGGCAACCGTCA
CAAGCCCATTACTTCGCTGCTGCCTGCGAAAGCGGCTCGGTCCAACTCTG
GGATCGACGGATGGCGGCAGGACCGGTCTTGAAAATAATGGGCCATAATG
GATTGGTGCTTGCGTTGGAATGGCATTTATCCGAGCCATGGGTTCTGGCG
ACGGGCGCGAGAGATCGCACGGTTAAGGTTTGGGATTTTAGTGACCAGTC
TGTGCGAGGCGAAGGTGG back to topCoding sequence (CDS) from alignment at scaffold_3:1099132..1100249- >mRNA_445 ID=mRNA_445|Name=jgi.p|Nanoce1779_2|551160|organism=Nannochloropsis oceanica|type=CDS|length=1662bp|location=Sequence derived from alignment at scaffold_3:1099132..1100249- (Nannochloropsis oceanica)
CTCGGCAAACCCTTAAACTGCATGTCTGTTGCCCGCATACCCGGTACTGC
CGGCCTTATGGCTGCAGTGGGGGGGGCTCAAATGCTTAAAGTCATCTCCA
TCTCCCCCCACGGCCTGATTGACAAAACCAACATTCGTTTAACCAACAAA
GTCACAAACGAAGTCAATTTCTCCATACATGACGTTGAATGGTGCGTCAA
AGATGCCAATCACAGCATCCTTGCTAGCGGAGCCAGTAACGGAAATATCA
TCCTCTGGGATATCTCTTCCCGCGACGGCCGGGTCTCACAAGAACGCATC
TTTGCCGCCCACCCCCGAACTGTCAATCGGATCAACTGGCACCCACAAGA
AGAGGGACTGCTGCTCTCCGCCTCCCAAGACAAGACCATTAAGCTTTGGG
ATCGACGGGGTCGCCTTCACGACTGCCAAGCCACCTACAACCCCCGTTCG
GAATCCGTGCGGGACGTCCAATGGCAACCGTCACAAGCCCATTACTTCGC
TGCTGCCTGCGAAAGCGGCTCGGTCCAACTCTGGGATCGACGGATGGCGG
CAGGACCGGTCTTGAAAATAATGGGCCATAATGGATTGGTGCTTGCGTTG
GAATGGCATTTATCCGAGCCATGGGTTCTGGCGACGGGCGCGAGAGATCG
CACGGTTAAGGTTTGGGATTTTAGTGACCAGTCTGTGCGAGGCGAAGGTA
TGTGGCATTCACTACCACCATCACTACAGCAATCCCCCGGTCAGGCATGG
CCCTCCAACGATACCGGGGCCAACTCTTCAGTACAGTCACTGCCATCGCC
GGGAAGTGCCGCCTATATATCCCACATTGACCTCGGCAAACCCTTAAACT
GCATGTCTGTTGCCCGCATACCCGGTACTGCCGGCCTTATGGCTGCAGTG
GGGGGGGCTCAAATGCTTAAAGTCATCTCCATCTCCCCCCACGGCCTGAT
TGACAAAACCAACATTCGTTTAACCAACAAAGTCACAAACGAAGTCAATT
TCTCCATACATGACGTTGAATGGTGCGTCAAAGATGCCAATCACAGCATC
CTTGCTAGCGGAGCCAGTAACGGAAATATCATCCTCTGGGATATCTCTTC
CCGCGACGGCCGGGTCTCACAAGAACGCATCTTTGCCGCCCACCCCCGAA
CTGTCAATCGGATCAACTGGCACCCACAAGAAGAGGGACTGCTGCTCTCC
GCCTCCCAAGACAAGACCATTAAGCTTTGGGATCGACGGGGTCGCCTTCA
CGACTGCCAAGCCACCTACAACCCCCGTTCGGAATCCGTGCGGGACGTCC
AATGGCAACCGTCACAAGCCCATTACTTCGCTGCTGCCTGCGAAAGCGGC
TCGGTCCAACTCTGGGATCGACGGATGGCGGCAGGACCGGTCTTGAAAAT
AATGGGCCATAATGGATTGGTGCTTGCGTTGGAATGGCATTTATCCGAGC
CATGGGTTCTGGCGACGGGCGCGAGAGATCGCACGGTTAAGGTTTGGGAT
TTTAGTGACCAGTCTGTGCGAGGCGAAGGTATGTGGCATTCACTACCACC
ATCACTACAGCAATCCCCCGGTCAGGCATGGCCCTCCAACGATACCGGGG
CCAACTCTTCAGTACAGTCACTGCCATCGCCGGGAAGTGCCGCCTATATA
TCCCACATTGAC back to top
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