Properties
| Property Name | Value |
|---|
| TranscriptId | 670889 |
| Track | FilteredModels2 |
| ProteinId | 670803 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:612517..614075 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4442 ID=mRNA_4442|Name=jgi.p|Nanoce1779_2|670803|organism=Nannochloropsis oceanica|type=mRNA|length=1050bp
ATGGCGCGGGCTTCTTCGCTGAGGCTGCCTCCTTCGAGACTCTCTAAGAA
CCGAAAGAAGCGAGGGCACGTCTCTGCGGGGCACGGGCGTATCGGCAAGC
ACCGCAAGCATCCGGGTGGGCGTGGTAATGCTGGTGGTCAGCACCATCAC
CGCATCTTGATGGATAAGTACCACCCTGGTTATTTCGGTAAGGTGGGTAT
GCGCCACTTCCACGTCCTCAAGAACCGCACCTACACCAAGTCCGTGAACG
TCGACAAGCTCTGGTCCCTTGCGGGTGCAGAAGCGTTCGAGGCAGCCAAG
AATGGGGACAAGGCGCCTGTGCTGGATGTGACGCAGATGGGTTTTTTCAA
AGTGTTAGGCAAGGGGAAGTTGCCCTCTGTGCCCCTGGTCGTGAAGGCCA
AGTACTTTTCCAAGGACGCGGAGAAGAAGATTAAGGCGGCCGGGGGCGCA
ACCCTTCTAACGGCGTAAAGAGTGGAAAGGCTCGCATAAGGGTGGAGACA
GGATGGAGGGACAGACAGACGCGGGGGGCGGCACGACAGACGGACTTTTT
GTTGTTGGTAGGAAAAAAGCAACTTCACGAGTGGCCACGAGGGTGGGCTC
GTGCTTTGCTAATAGAGGACTTATTTGAATAAAAAGAAAGAAGTTCGGGT
GCCGACCCTTACAGAAGTGGTGCCGCTGGAGGGGATTTATTTTGTGGAGG
GAGCGTCACCCTTGCATTGGTAATCACATCTACTTCCACCTGTTCTGTTG
ATGTCATGAAACGAGTGAGGGCTTGGAGATACACTCGTCTCCTTTTGTTC
ATCATCCCACCCTTCTGTATTTTCCCTTACCCCCCTTTCCCCTCCCCCTG
TCGAACGCCCTCCGCCCCTGCAACCTCCTCGCTCCTCCACCAGAAGACCC
AAGGTCTCCTCAGAAAGAAGCAGATGCAGTCCATAGCACCTTTATTCAAT
AAATTATGAATATGCAAAATAGTCTGTGCATAGCATTGGAGTGGCTGCGC
GGGAAGGATTCAGCTGCAGCCCCGGGTACAGTCTACGCCACAGACCTTGG back to topprotein sequence of jgi.p|Nanoce1779_2|670803 >mRNA_4442-protein ID=mRNA_4442-protein|Name=jgi.p|Nanoce1779_2|670803|organism=Nannochloropsis oceanica|type=polypeptide|length=156bp
MARASSLRLPPSRLSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHH
RILMDKYHPGYFGKVGMRHFHVLKNRTYTKSVNVDKLWSLAGAEAFEAAK
NGDKAPVLDVTQMGFFKVLGKGKLPSVPLVVKAKYFSKDAEKKIKAAGGA
TLLTA* back to topmRNA from alignment at scaffold_10:612517..614075- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4442 ID=mRNA_4442|Name=jgi.p|Nanoce1779_2|670803|organism=Nannochloropsis oceanica|type=mRNA|length=1559bp|location=Sequence derived from alignment at scaffold_10:612517..614075- (Nannochloropsis oceanica)
ATGGCGCGGGCTTCTTCGCTGAGGCTGCCTGTGAGGAGGAGGAGGAGGGT
GTAGGAAAAGGGCTTTGCCAACGGAAGTACGGGTATAATTCAGCCCTTAG
CCGAGCAGCATGATTGGCTGGTGCACGCTCAAGGACTGGGAAGCAGCTGA
GGCTTCCTACGACGCCTGCCCTCTCTCTGTCTCTGAACAAGAGAACTGTC
ACCACGATCAACTTTGCCTGTCTTACCCCTTTCCCTGCCTACCTTACACT
TGCACAACAACACAGGAAGTGATCGTTCTTCTTGTTCATCCATGGTAAGT
GCTACAGCTCAGTCGAGACGAATGGAAGGGAGCGACGATTGATCCCAGCA
TCATCATCAGCCCGCATGCTCATTACCCTTCCTTTCCTCCCTACAGCCTT
CGAGACTCTCTAAGAACCGAAAGAAGCGAGGGCACGTCTCTGCGGGGCAC
GGGCGTATCGGCAAGCACCGCAAGCATCCGGGTACGTCACAGGGATCTGA
GGGAGGGGAGGGACGAAGTTGGGGTGGCAAGGATTTGGAACGCGGAGTAA
TTACCACTCTCGTACAACACGCGCTCTAATCTTACGTGTCTCTATTCCTT
TTCTCCTCTCTTTCTTTCTCGCAGGTGGGCGTGGTAATGCTGGTGGTCAG
CACCATCACCGCATCTTGATGGATAAGTACCACCCTGGTTATTTCGGTAA
GGTGGGTATGCGCCACTTCCACGTCCTCAAGAACCGCACCTACACCAAGT
CCGTGAACGTCGACAAGCTCTGGTCCCTTGCGGGTGCAGAAGCGTTCGAG
GCAGCCAAGAATGGGGACAAGGCGCCTGTGCTGGATGTGACGCAGATGGG
TTTTTTCAAAGTGTTAGGCAAGGGGAAGTTGCCCTCTGTGCCCCTGGTCG
TGAAGGCCAAGTACTTTTCCAAGGACGCGGAGAAGAAGATTAAGGCGGCC
GGGGGCGCAACCCTTCTAACGGCGTAAAGAGTGGAAAGGCTCGCATAAGG
GTGGAGACAGGATGGAGGGACAGACAGACGCGGGGGGCGGCACGACAGAC
GGACTTTTTGTTGTTGGTAGGAAAAAAGCAACTTCACGAGTGGCCACGAG
GGTGGGCTCGTGCTTTGCTAATAGAGGACTTATTTGAATAAAAAGAAAGA
AGTTCGGGTGCCGACCCTTACAGAAGTGGTGCCGCTGGAGGGGATTTATT
TTGTGGAGGGAGCGTCACCCTTGCATTGGTAATCACATCTACTTCCACCT
GTTCTGTTGATGTCATGAAACGAGTGAGGGCTTGGAGATACACTCGTCTC
CTTTTGTTCATCATCCCACCCTTCTGTATTTTCCCTTACCCCCCTTTCCC
CTCCCCCTGTCGAACGCCCTCCGCCCCTGCAACCTCCTCGCTCCTCCACC
AGAAGACCCAAGGTCTCCTCAGAAAGAAGCAGATGCAGTCCATAGCACCT
TTATTCAATAAATTATGAATATGCAAAATAGTCTGTGCATAGCATTGGAG
TGGCTGCGCGGGAAGGATTCAGCTGCAGCCCCGGGTACAGTCTACGCCAC
AGACCTTGG back to topCoding sequence (CDS) from alignment at scaffold_10:612517..614075- >mRNA_4442 ID=mRNA_4442|Name=jgi.p|Nanoce1779_2|670803|organism=Nannochloropsis oceanica|type=CDS|length=1404bp|location=Sequence derived from alignment at scaffold_10:612517..614075- (Nannochloropsis oceanica)
GTGGGCGTGGTAATGCTGGTGGTCAGCACCATCACCGCATCTTGATGGAT
AAGTACCACCCTGGTTATTTCGGTAAGGTGGGTATGCGCCACTTCCACGT
CCTCAAGAACCGCACCTACACCAAGTCCGTGAACGTCGACAAGCTCTGGT
CCCTTGCGGGTGCAGAAGCGTTCGAGGCAGCCAAGAATGGGGACAAGGCG
CCTGTGCTGGATGTGACGCAGATGGGTTTTTTCAAAGTGTTAGGCAAGGG
GAAGTTGCCCTCTGTGCCCCTGGTCGTGAAGGCCAAGTACTTTTCCAAGG
ACGCGGAGAAGAAGATTAAGGCGGCCGGGGGCGCAACCCTTCTAACGGCG
TAACCTTCGAGACTCTCTAAGAACCGAAAGAAGCGAGGGCACGTCTCTGC
GGGGCACGGGCGTATCGGCAAGCACCGCAAGCATCCGGATGGCGCGGGCT
TCTTCGCTGAGGCTGCCTGTGGGCGTGGTAATGCTGGTGGTCAGCACCAT
CACCGCATCTTGATGGATAAGTACCACCCTGGTTATTTCGGTAAGGTGGG
TATGCGCCACTTCCACGTCCTCAAGAACCGCACCTACACCAAGTCCGTGA
ACGTCGACAAGCTCTGGTCCCTTGCGGGTGCAGAAGCGTTCGAGGCAGCC
AAGAATGGGGACAAGGCGCCTGTGCTGGATGTGACGCAGATGGGTTTTTT
CAAAGTGTTAGGCAAGGGGAAGTTGCCCTCTGTGCCCCTGGTCGTGAAGG
CCAAGTACTTTTCCAAGGACGCGGAGAAGAAGATTAAGGCGGCCGGGGGC
GCAACCCTTCTAACGGCGTAACCTTCGAGACTCTCTAAGAACCGAAAGAA
GCGAGGGCACGTCTCTGCGGGGCACGGGCGTATCGGCAAGCACCGCAAGC
ATCCGGATGGCGCGGGCTTCTTCGCTGAGGCTGCCTGTGGGCGTGGTAAT
GCTGGTGGTCAGCACCATCACCGCATCTTGATGGATAAGTACCACCCTGG
TTATTTCGGTAAGGTGGGTATGCGCCACTTCCACGTCCTCAAGAACCGCA
CCTACACCAAGTCCGTGAACGTCGACAAGCTCTGGTCCCTTGCGGGTGCA
GAAGCGTTCGAGGCAGCCAAGAATGGGGACAAGGCGCCTGTGCTGGATGT
GACGCAGATGGGTTTTTTCAAAGTGTTAGGCAAGGGGAAGTTGCCCTCTG
TGCCCCTGGTCGTGAAGGCCAAGTACTTTTCCAAGGACGCGGAGAAGAAG
ATTAAGGCGGCCGGGGGCGCAACCCTTCTAACGGCGTAACCTTCGAGACT
CTCTAAGAACCGAAAGAAGCGAGGGCACGTCTCTGCGGGGCACGGGCGTA
TCGGCAAGCACCGCAAGCATCCGGATGGCGCGGGCTTCTTCGCTGAGGCT
GCCT back to top
|