Properties
| Property Name | Value |
|---|
| TranscriptId | 565938 |
| Track | FilteredModels2 |
| ProteinId | 565852 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:579740..581547 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4432 ID=mRNA_4432|Name=jgi.p|Nanoce1779_2|565852|organism=Nannochloropsis oceanica|type=mRNA|length=1359bp
ATGGCAGTGGCCTGTGCCCAAGGAGCCTTTCCTGGCTGGAGCGGATTGAC
CATGAAGGCAAGGGCTAGCATCATGTTCCGCTTTCAGCATTTGATGGAAA
TTCACGCGGAAGAGTTGGCCCAGCTGGTAGTGCGTGAGAACGGGAAGAAC
ATCGCCGAGGCCCGTGCTTCCGTCGCTAAAGGAAACGAGACAGTGGAATG
GGCGTGTGGGCTGCCCCAAATGGTGCAAGGGAAGATCTTGCAGGTCTCTC
GTGGGGTCACATGCTCGGATTTGCGCGAGCCTATAGGGGTGGTTGCTTCT
GTGTCTCCTCTTAATTTTCCGATAATGTGTCCCATGTGGACGATTCCGAT
CGCGTTGACTGCAGGGAACTGCGTGATTCTCAAGCCGTCGGAAAAGGTGC
CTTTGACAATGCACCGTGTGGCGGCATTGTTACACGAAGCAGGTGTGCCT
CCAGGGGTGTTTCAGATCGTCAACGGTACAGCCGAGGCGGTGAATGCTCT
AATCGACCATCCTGGCGTTGCAGGAGTGACGTTCGTAGGATCCTCAAGGG
TGGCGGAGTTGGTCGCCAATCGGGCCACCAAATTAAATAAAAGGGTGCTG
GCTATGGGAGGCGCGAAGAACCATTTGGTGGCGCTACCGGATTGTGAGGT
GGAGAGTGCGGCGAGTGATATTGTGGCGAGCTTCGCGGGATGTGCCGGGC
AACGGTGCATGGCGGCCACCGTCCTCATCCTCGTCGGAAAGCAGCCTGCA
CTACTTGACGCCATAGTTAGCAAAGCCAAAGGCCTCGCTCCTGGAGTTAC
ACCTGGACAGGTGGGTGCTATCATTGACGCCGCGTCGCAACAGCGAATTT
TGGGGTATATAAGCGTGGCGGAGAAGGAGGGTGTGAAGCTGTTGGTGGAC
GGTCGAGGGTGGGCAACGAGCCAAAAAGCGGGTACTTGGGTAGGGCCGAC
GGTGTTGCTGCATTCGAATAAGGAGGACAAGGCGCTGAAAGACGAAATAT
TCGGGCCAGTCTTGTCGGTGATTGAAATGCAGACCTGGGATGAAGCGATT
GCCTTTGAAAATGCCAATCCGCATGGGAATGCTGCTTGTATTTATACCAC
GGTTGGGGCTCACGCTGCGTATTTTGAGACAAGATTCCGCGCGGGCATGA
TAGGGGTTAATGTGGGCGTGCCTGTCCCGAGGGAGCCGTTCTCGTTTGGA
GGGCTGTTTGGCACGCAAAGCAAATATGGGTGCATGGTAGATATTACGGG
CGAGGGTTGTTTGGAGTTCGTGACCAATAAAAGGAAAATAACAACCAAGT
GGGCGTTTCCCTATGGGGTGGGGGGGAGTGCTGCTGACACAAGAACACCG
CACACTTAA back to topprotein sequence of jgi.p|Nanoce1779_2|565852 >mRNA_4432-protein ID=mRNA_4432-protein|Name=jgi.p|Nanoce1779_2|565852|organism=Nannochloropsis oceanica|type=polypeptide|length=453bp
MAVACAQGAFPGWSGLTMKARASIMFRFQHLMEIHAEELAQLVVRENGKN
IAEARASVAKGNETVEWACGLPQMVQGKILQVSRGVTCSDLREPIGVVAS
VSPLNFPIMCPMWTIPIALTAGNCVILKPSEKVPLTMHRVAALLHEAGVP
PGVFQIVNGTAEAVNALIDHPGVAGVTFVGSSRVAELVANRATKLNKRVL
AMGGAKNHLVALPDCEVESAASDIVASFAGCAGQRCMAATVLILVGKQPA
LLDAIVSKAKGLAPGVTPGQVGAIIDAASQQRILGYISVAEKEGVKLLVD
GRGWATSQKAGTWVGPTVLLHSNKEDKALKDEIFGPVLSVIEMQTWDEAI
AFENANPHGNAACIYTTVGAHAAYFETRFRAGMIGVNVGVPVPREPFSFG
GLFGTQSKYGCMVDITGEGCLEFVTNKRKITTKWAFPYGVGGSAADTRTP
HT* back to topmRNA from alignment at scaffold_10:579740..581547- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4432 ID=mRNA_4432|Name=jgi.p|Nanoce1779_2|565852|organism=Nannochloropsis oceanica|type=mRNA|length=1808bp|location=Sequence derived from alignment at scaffold_10:579740..581547- (Nannochloropsis oceanica)
ATGGCAGTGGCCTGTGCCCAAGGAGCCTTTCCTGGCTGGAGCGGATTGAC
CATGAAGGCAAGGGCTAGCATCATGTTCCGCTTTCAGCATTTGATGGAAA
TTCACGCGGAAGAGTTGGCCCAGCTGGTAGTGCGTGAGAACGGGAAGAAC
ATCGCCGAGGCCCGTGCTTCCGTCGCTAAAGGAAACGAGACAGTGGAATG
GGCGTGTGGGCTGCCCCAAATGGTGCAAGGGAAGATCTTGCAGGTCTCTC
GTGGGGTCACATGCTCGGATTTGCGCGAGCCTATAGGGGTGGTTGCTTCT
GTGTCTCCTCTTAATTTTCCGATAATGTGTCCCATGTGGACGATTCCGAT
CGCGTTGACTGCAGGGAACTGCGTGATTCTCAAGCCGTCGGAAAAGGTGC
CTTTGACAATGCACCGTGTGGCGGCATTGTTACACGAAGCAGGTGTGCCT
CCAGGGGTGTTTCAGATCGTCAACGGTACAGCCGAGGCGGTGAATGCTCT
AATCGACCATCCTGGCGTTGCAGGAGTGACGTTCGTAGGATCCTCAAGGG
TGGCGGAGTTGGTCGCCAATCGGGCCACCAAATTAAATAAAAGGGTGCTG
GCTATGGGAGGCGCGAAGAACCATTTGGTGGCGCTACCGGATTGTGAGGT
GGAGAGTGCGGCGAGTGATATTGTGGCGAGCTTCGCGGGATGTGCCGGGC
AACGGTGCATGGTACGTTGCCGCGTGTAAATGTTTTGATGGGTGACATTT
CTATGTCTCTCCTCCTCCGGTCGTGCACTCTTTGCCATCACCATTCGGTG
ATGGTTCTTTCGTCTACTTTCAATCTTTTTCATTCATTTATTCGTAATTG
TTTGTTAATTTGTCGTCTTAAATCTTCTCATACACACGCAATTTTACTCC
GCTCCTCCCCTTCCTCTGCACAGGCGGCCACCGTCCTCATCCTCGTCGGA
AAGCAGCCTGCACTACTTGACGCCATAGTTAGCAAAGCCAAAGGCCTCGC
TCCTGGAGTTACACCTGGACAGGTGGGTGCTATCATTGACGCCGCGTCGC
AACAGCGAATTTTGGGGTATATAAGCGTGGCGGAGAAGGAGGGTGTGAAG
CTGTTGGTGGACGGTCGAGGGTGGGCAACGAGCCAAAAAGCGGGTACTTG
GGTAGGGCCGACGGTGTTGCTGCATTCGAATAAGGAGGACAAGGCGCTGA
AAGACGAAATATTCGGGCCAGTCTTGTCGGTGATTGAAATGCAGACCTGG
GATGAAGCGATTGCCTTTGAAAATGCCAATCCGCATGGGAATGCTGCTTG
TATTTATACCACGGTTGGGGCTCACGCTGCGTATTTTGAGACAAGATTCC
GCGCGGGCATGATAGGGGTTAATGTGGGCGTGCCTGTCCCGAGGGAGCCG
TTCTCGTTTGGAGGGCTGTTTGGCACGCAAAGCAAATATGGGTGCATGGT
AGATATTACGGGCGAGGGTTGTTTGGAGTTCGTGACCAATAAAAGGAAAA
TAACAACCAAGTGGGCGTTTCCCTATGGGGTGGGGGGGAGTGCTGCTGGT
GGGGACGTGAATGGGAATGGAGGGGGCGCATTTCAGGGACAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCATGCATCGGACCGGGCGAGTTTCATAGGGT
CCATGTAGATGGGAGAACGACAGATACAACAGGAAGAGAAGAAGAGAAAG
ATTCACAGCAAGCATTTCAGTTGACCGCGGTATAAATTTCAAGGATTCTT
ACCTGCGCCATATTCTCGGTACTCCTTCAACACAGACACAAGAACACCGC
ACACTTAA back to topCoding sequence (CDS) from alignment at scaffold_10:579740..581547- >mRNA_4432 ID=mRNA_4432|Name=jgi.p|Nanoce1779_2|565852|organism=Nannochloropsis oceanica|type=CDS|length=4077bp|location=Sequence derived from alignment at scaffold_10:579740..581547- (Nannochloropsis oceanica)
ACACAAGAACACCGCACACTTAAGCGGCCACCGTCCTCATCCTCGTCGGA
AAGCAGCCTGCACTACTTGACGCCATAGTTAGCAAAGCCAAAGGCCTCGC
TCCTGGAGTTACACCTGGACAGGTGGGTGCTATCATTGACGCCGCGTCGC
AACAGCGAATTTTGGGGTATATAAGCGTGGCGGAGAAGGAGGGTGTGAAG
CTGTTGGTGGACGGTCGAGGGTGGGCAACGAGCCAAAAAGCGGGTACTTG
GGTAGGGCCGACGGTGTTGCTGCATTCGAATAAGGAGGACAAGGCGCTGA
AAGACGAAATATTCGGGCCAGTCTTGTCGGTGATTGAAATGCAGACCTGG
GATGAAGCGATTGCCTTTGAAAATGCCAATCCGCATGGGAATGCTGCTTG
TATTTATACCACGGTTGGGGCTCACGCTGCGTATTTTGAGACAAGATTCC
GCGCGGGCATGATAGGGGTTAATGTGGGCGTGCCTGTCCCGAGGGAGCCG
TTCTCGTTTGGAGGGCTGTTTGGCACGCAAAGCAAATATGGGTGCATGGT
AGATATTACGGGCGAGGGTTGTTTGGAGTTCGTGACCAATAAAAGGAAAA
TAACAACCAAGTGGGCGTTTCCCTATGGGGTGGGGGGGAGTGCTGCTGAT
GGCAGTGGCCTGTGCCCAAGGAGCCTTTCCTGGCTGGAGCGGATTGACCA
TGAAGGCAAGGGCTAGCATCATGTTCCGCTTTCAGCATTTGATGGAAATT
CACGCGGAAGAGTTGGCCCAGCTGGTAGTGCGTGAGAACGGGAAGAACAT
CGCCGAGGCCCGTGCTTCCGTCGCTAAAGGAAACGAGACAGTGGAATGGG
CGTGTGGGCTGCCCCAAATGGTGCAAGGGAAGATCTTGCAGGTCTCTCGT
GGGGTCACATGCTCGGATTTGCGCGAGCCTATAGGGGTGGTTGCTTCTGT
GTCTCCTCTTAATTTTCCGATAATGTGTCCCATGTGGACGATTCCGATCG
CGTTGACTGCAGGGAACTGCGTGATTCTCAAGCCGTCGGAAAAGGTGCCT
TTGACAATGCACCGTGTGGCGGCATTGTTACACGAAGCAGGTGTGCCTCC
AGGGGTGTTTCAGATCGTCAACGGTACAGCCGAGGCGGTGAATGCTCTAA
TCGACCATCCTGGCGTTGCAGGAGTGACGTTCGTAGGATCCTCAAGGGTG
GCGGAGTTGGTCGCCAATCGGGCCACCAAATTAAATAAAAGGGTGCTGGC
TATGGGAGGCGCGAAGAACCATTTGGTGGCGCTACCGGATTGTGAGGTGG
AGAGTGCGGCGAGTGATATTGTGGCGAGCTTCGCGGGATGTGCCGGGCAA
CGGTGCATGACACAAGAACACCGCACACTTAAGCGGCCACCGTCCTCATC
CTCGTCGGAAAGCAGCCTGCACTACTTGACGCCATAGTTAGCAAAGCCAA
AGGCCTCGCTCCTGGAGTTACACCTGGACAGGTGGGTGCTATCATTGACG
CCGCGTCGCAACAGCGAATTTTGGGGTATATAAGCGTGGCGGAGAAGGAG
GGTGTGAAGCTGTTGGTGGACGGTCGAGGGTGGGCAACGAGCCAAAAAGC
GGGTACTTGGGTAGGGCCGACGGTGTTGCTGCATTCGAATAAGGAGGACA
AGGCGCTGAAAGACGAAATATTCGGGCCAGTCTTGTCGGTGATTGAAATG
CAGACCTGGGATGAAGCGATTGCCTTTGAAAATGCCAATCCGCATGGGAA
TGCTGCTTGTATTTATACCACGGTTGGGGCTCACGCTGCGTATTTTGAGA
CAAGATTCCGCGCGGGCATGATAGGGGTTAATGTGGGCGTGCCTGTCCCG
AGGGAGCCGTTCTCGTTTGGAGGGCTGTTTGGCACGCAAAGCAAATATGG
GTGCATGGTAGATATTACGGGCGAGGGTTGTTTGGAGTTCGTGACCAATA
AAAGGAAAATAACAACCAAGTGGGCGTTTCCCTATGGGGTGGGGGGGAGT
GCTGCTGATGGCAGTGGCCTGTGCCCAAGGAGCCTTTCCTGGCTGGAGCG
GATTGACCATGAAGGCAAGGGCTAGCATCATGTTCCGCTTTCAGCATTTG
ATGGAAATTCACGCGGAAGAGTTGGCCCAGCTGGTAGTGCGTGAGAACGG
GAAGAACATCGCCGAGGCCCGTGCTTCCGTCGCTAAAGGAAACGAGACAG
TGGAATGGGCGTGTGGGCTGCCCCAAATGGTGCAAGGGAAGATCTTGCAG
GTCTCTCGTGGGGTCACATGCTCGGATTTGCGCGAGCCTATAGGGGTGGT
TGCTTCTGTGTCTCCTCTTAATTTTCCGATAATGTGTCCCATGTGGACGA
TTCCGATCGCGTTGACTGCAGGGAACTGCGTGATTCTCAAGCCGTCGGAA
AAGGTGCCTTTGACAATGCACCGTGTGGCGGCATTGTTACACGAAGCAGG
TGTGCCTCCAGGGGTGTTTCAGATCGTCAACGGTACAGCCGAGGCGGTGA
ATGCTCTAATCGACCATCCTGGCGTTGCAGGAGTGACGTTCGTAGGATCC
TCAAGGGTGGCGGAGTTGGTCGCCAATCGGGCCACCAAATTAAATAAAAG
GGTGCTGGCTATGGGAGGCGCGAAGAACCATTTGGTGGCGCTACCGGATT
GTGAGGTGGAGAGTGCGGCGAGTGATATTGTGGCGAGCTTCGCGGGATGT
GCCGGGCAACGGTGCATGACACAAGAACACCGCACACTTAAGCGGCCACC
GTCCTCATCCTCGTCGGAAAGCAGCCTGCACTACTTGACGCCATAGTTAG
CAAAGCCAAAGGCCTCGCTCCTGGAGTTACACCTGGACAGGTGGGTGCTA
TCATTGACGCCGCGTCGCAACAGCGAATTTTGGGGTATATAAGCGTGGCG
GAGAAGGAGGGTGTGAAGCTGTTGGTGGACGGTCGAGGGTGGGCAACGAG
CCAAAAAGCGGGTACTTGGGTAGGGCCGACGGTGTTGCTGCATTCGAATA
AGGAGGACAAGGCGCTGAAAGACGAAATATTCGGGCCAGTCTTGTCGGTG
ATTGAAATGCAGACCTGGGATGAAGCGATTGCCTTTGAAAATGCCAATCC
GCATGGGAATGCTGCTTGTATTTATACCACGGTTGGGGCTCACGCTGCGT
ATTTTGAGACAAGATTCCGCGCGGGCATGATAGGGGTTAATGTGGGCGTG
CCTGTCCCGAGGGAGCCGTTCTCGTTTGGAGGGCTGTTTGGCACGCAAAG
CAAATATGGGTGCATGGTAGATATTACGGGCGAGGGTTGTTTGGAGTTCG
TGACCAATAAAAGGAAAATAACAACCAAGTGGGCGTTTCCCTATGGGGTG
GGGGGGAGTGCTGCTGATGGCAGTGGCCTGTGCCCAAGGAGCCTTTCCTG
GCTGGAGCGGATTGACCATGAAGGCAAGGGCTAGCATCATGTTCCGCTTT
CAGCATTTGATGGAAATTCACGCGGAAGAGTTGGCCCAGCTGGTAGTGCG
TGAGAACGGGAAGAACATCGCCGAGGCCCGTGCTTCCGTCGCTAAAGGAA
ACGAGACAGTGGAATGGGCGTGTGGGCTGCCCCAAATGGTGCAAGGGAAG
ATCTTGCAGGTCTCTCGTGGGGTCACATGCTCGGATTTGCGCGAGCCTAT
AGGGGTGGTTGCTTCTGTGTCTCCTCTTAATTTTCCGATAATGTGTCCCA
TGTGGACGATTCCGATCGCGTTGACTGCAGGGAACTGCGTGATTCTCAAG
CCGTCGGAAAAGGTGCCTTTGACAATGCACCGTGTGGCGGCATTGTTACA
CGAAGCAGGTGTGCCTCCAGGGGTGTTTCAGATCGTCAACGGTACAGCCG
AGGCGGTGAATGCTCTAATCGACCATCCTGGCGTTGCAGGAGTGACGTTC
GTAGGATCCTCAAGGGTGGCGGAGTTGGTCGCCAATCGGGCCACCAAATT
AAATAAAAGGGTGCTGGCTATGGGAGGCGCGAAGAACCATTTGGTGGCGC
TACCGGATTGTGAGGTGGAGAGTGCGGCGAGTGATATTGTGGCGAGCTTC
GCGGGATGTGCCGGGCAACGGTGCATG back to top
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