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Properties
| Property Name | Value |
|---|
| TranscriptId | 577413 |
| Track | FilteredModels2 |
| ProteinId | 577327 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:1082233..1084111 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_439 ID=mRNA_439|Name=jgi.p|Nanoce1779_2|577327|organism=Nannochloropsis oceanica|type=mRNA|length=1059bp
ACAGTCAAGCTTCTCATAGGAGCTATGGCATCCACCAGCGACTTGGACGA
GCAGATTGAGAGGCTTAGGCGGTGCGAATACTTAAAGGAGCAAGAGGTAA
AGGTGTTGTGCCAGAAGGCCCGGGAAATTCTAGTGGACGAGTCGAACGTC
CAGAAGGTCGATGCTCCCGTCACAATATGCGGGGATATCCACGGGCAATT
TTATGATTTGATGGAGCTATTCAGGGTCGGTGGCGACTGCCCCGAGCGCA
ACTACCTTTTCCTCGGGGATTTTGTGGACCGCGGTTACTACTCTGTCGAA
ACGTTTCTACTCTTGCTCGCTCTGAAGGTGCGATACCCTCAAAGAATCAC
TCTGATACGAGGCAACCATGAGAGCAGGCAGATCACGCAGGTCTATGGGT
TCTACGATGAGTGCTTACGAAAGTACGGCAGCGTTAATGTCTGGCGCTAC
TGCACCGAAATCTTCGATTACTTGAGCTTGTCGGCCATTATAGACGATAA
CATCTTTTGCGTCCATGGTGGCTTGAGCCCATCGATCAACACCATTGACC
AGATCCGCGTGATAGACCGCAAGCAAGAGGTGCCTCACGAGGGCGCCATG
TGCGACCTTATGTGGTCCGATCCCGAGGAGATCGATGGGTGGGGCCTAAG
CCCACGCGGGGCCGGGTATCAATTCGGAGGGGACGTGGTTGAGAAGTTTA
ATCAGATGAATGGCCTGCGCTTGATTGCACGCGCGCATCAGCTGGTCATG
GAAGGGCACAAGGAAATGTTCAACAACCAACTTGTCACCATTTGGTCCGC
GCCCAATTACTGCTATCGGTGTGGGAACGTCGCAGCGATTTTGGAGTTCG
ATGAGAGGTGCGTCCAGTCCTTTAAGATCTTTGAGGCAGCGCCTCAGGAG
GTCCGAGGGGTGCCACAGAAGAACCCAGCACCGGATTACTTTTTGTAAAA
ACAAATGATCCAGGTCATGGGGAAGGAAGGAAGGAGGGAGGGAGGGGTAA
AAGGGTTGGAGGGGAGGAAGGAAGTGGAGAGGTTATTGAAACGAGCGGCA
GTTTTGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|577327 >mRNA_439-protein ID=mRNA_439-protein|Name=jgi.p|Nanoce1779_2|577327|organism=Nannochloropsis oceanica|type=polypeptide|length=308bp
MASTSDLDEQIERLRRCEYLKEQEVKVLCQKAREILVDESNVQKVDAPVT
ICGDIHGQFYDLMELFRVGGDCPERNYLFLGDFVDRGYYSVETFLLLLAL
KVRYPQRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYL
SLSAIIDDNIFCVHGGLSPSINTIDQIRVIDRKQEVPHEGAMCDLMWSDP
EEIDGWGLSPRGAGYQFGGDVVEKFNQMNGLRLIARAHQLVMEGHKEMFN
NQLVTIWSAPNYCYRCGNVAAILEFDERCVQSFKIFEAAPQEVRGVPQKN
PAPDYFL* back to topmRNA from alignment at scaffold_3:1082233..1084111- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_439 ID=mRNA_439|Name=jgi.p|Nanoce1779_2|577327|organism=Nannochloropsis oceanica|type=mRNA|length=1879bp|location=Sequence derived from alignment at scaffold_3:1082233..1084111- (Nannochloropsis oceanica)
ACAGTCAAGCTTCTCATAGGAGCTATGGCATCCACCAGCGACTTGGACGA
GCAGATTGAGAGGCTTAGGTAAGAAGAGTGTAGGTAGGGTAGTGCCAGGA
GGGGATGATGAGGCGGAGGGGAATAAGGAAGGAGTGGCAGAGTGTGTGTG
TTTTTTAAATGGATGAAGCGCAGTCCTTTCGTTGCACTCACAAACTTGCA
TTCATAATAGGCGGTGCGAATACTTAAAGGAGCAAGAGGTAAAGGTGTTG
TGCCAGAAGGCCCGGGAAATTCTAGTGGACGAGTCGAACGTCCAGAAGGT
CGATGCTCCCGTCACAATATGCGGGGATATCCACGGGCAATTTTATGATT
TGATGGAGGTACGTTCATGAAATGGCAAAGGGGCTATGACAGCAGAGAAG
GAGAGACGAGCGATGGACGTGGGAGGTGCCATGACTGTACGACCTCTTCG
CCCGTGGCTGGGAATGGAGAGGCCTTTTTAACTTAACCACCTCCTTCCTT
CTTCCCTCCCTGCCTTCCACCCTCACTCCACCCACAGCTATTCAGGGTCG
GTGGCGACTGCCCCGAGCGCAACTACCTTTTCCTCGGGGATTTTGTGGAC
CGCGGTTACTACTCTGTCGAAACGTTTCTACTCTTGCTCGCTCTGAAGGT
GCGATACCCTCAAAGAATCACTCTGATACGAGGCAACCATGAGAGCAGGC
AGATCACGCAGGTAGGGAGGGAGGGAAAGAAGGACGGGGGAAGGAAAGAG
GGCACTGGAGGGATAGAAAGGCTGGTAAACGTGGGCGGGAGGGAGGGATG
TACACGCTCCCTTCTCATCTCTGTTGGGCAGCCACTGAGAAACTGTCGAG
CAGACACTCAGCCCTCCCTCCTTCCCTCCCCTCCTCCCTCCCCTTCTAGG
TCTATGGGTTCTACGATGAGTGCTTACGAAAGTACGGCAGCGTTAATGTC
TGGCGCTACTGCACCGAAATCTTCGATTACTTGAGCTTGTCGGCCATTAT
AGACGATAACATCTTTTGCGTCCATGGTGGCTTGAGCCCATCGATCAACA
CCATTGACCAGGTCGGCCGCTTCCTCCATCCCTCCCTTCCTCCCTCTCGC
CTCCCTCCCTCTCACTACTCTACTTGCCTCAGTCATGCTTGACCCTGTGT
AGGTAGACATATCCACCTGTCCCTCCCTCCCTCCCTCCCTCCTCGTAGAT
CCGCGTGATAGACCGCAAGCAAGAGGTGCCTCACGAGGGCGCCATGTGCG
ACCTTATGTGGTCCGATCCCGAGGAGATCGATGGGTGGGGCCTAAGCCCA
CGCGGGGCCGGGTATCAATTCGGAGGGGACGTGGTTGAGAAGTTTAATCA
GATGAATGGCCTGCGCTTGATTGCACGCGCGCATCAGCTGGTAGGGATGT
CGGGGGAGGGACGGAGGGAGGGACTGAGGGAGGGACGGGGGGGCGCCAGG
CTTTGTTTTTCCTTATGAATTTGATGTTTCCTTGCCCTTAACACTCGCAC
CGTCTCCTTCCTCCCTCCCTCCCTCCCTCTCTCTTTACCCACCCGCTCAC
GCACCTCTGTCCAGGTCATGGAAGGGCACAAGGAAATGTTCAACAACCAA
CTTGTCACCATTTGGTCCGCGCCCAATTACTGCTATCGGTGTGGGAACGT
CGCAGCGATTTTGGAGTTCGATGAGAGGTGCGTCCAGTCCTTTAAGATCT
TTGAGGCAGCGCCTCAGGAGGTCCGAGGGGTGCCACAGAAGAACCCAGCA
CCGGATTACTTTTTGTAAAAACAAATGATCCAGGTCATGGGGAAGGAAGG
AAGGAGGGAGGGAGGGGTAAAAGGGTTGGAGGGGAGGAAGGAAGTGGAGA
GGTTATTGAAACGAGCGGCAGTTTTGTAA back to topCoding sequence (CDS) from alignment at scaffold_3:1082233..1084111- >mRNA_439 ID=mRNA_439|Name=jgi.p|Nanoce1779_2|577327|organism=Nannochloropsis oceanica|type=CDS|length=5544bp|location=Sequence derived from alignment at scaffold_3:1082233..1084111- (Nannochloropsis oceanica)
GTCATGGAAGGGCACAAGGAAATGTTCAACAACCAACTTGTCACCATTTG
GTCCGCGCCCAATTACTGCTATCGGTGTGGGAACGTCGCAGCGATTTTGG
AGTTCGATGAGAGGTGCGTCCAGTCCTTTAAGATCTTTGAGGCAGCGCCT
CAGGAGGTCCGAGGGGTGCCACAGAAGAACCCAGCACCGGATTACTTTTT
GTAAATCCGCGTGATAGACCGCAAGCAAGAGGTGCCTCACGAGGGCGCCA
TGTGCGACCTTATGTGGTCCGATCCCGAGGAGATCGATGGGTGGGGCCTA
AGCCCACGCGGGGCCGGGTATCAATTCGGAGGGGACGTGGTTGAGAAGTT
TAATCAGATGAATGGCCTGCGCTTGATTGCACGCGCGCATCAGCTGGTCT
ATGGGTTCTACGATGAGTGCTTACGAAAGTACGGCAGCGTTAATGTCTGG
CGCTACTGCACCGAAATCTTCGATTACTTGAGCTTGTCGGCCATTATAGA
CGATAACATCTTTTGCGTCCATGGTGGCTTGAGCCCATCGATCAACACCA
TTGACCAGCTATTCAGGGTCGGTGGCGACTGCCCCGAGCGCAACTACCTT
TTCCTCGGGGATTTTGTGGACCGCGGTTACTACTCTGTCGAAACGTTTCT
ACTCTTGCTCGCTCTGAAGGTGCGATACCCTCAAAGAATCACTCTGATAC
GAGGCAACCATGAGAGCAGGCAGATCACGCAGGCGGTGCGAATACTTAAA
GGAGCAAGAGGTAAAGGTGTTGTGCCAGAAGGCCCGGGAAATTCTAGTGG
ACGAGTCGAACGTCCAGAAGGTCGATGCTCCCGTCACAATATGCGGGGAT
ATCCACGGGCAATTTTATGATTTGATGGAGATGGCATCCACCAGCGACTT
GGACGAGCAGATTGAGAGGCTTAGGTCATGGAAGGGCACAAGGAAATGTT
CAACAACCAACTTGTCACCATTTGGTCCGCGCCCAATTACTGCTATCGGT
GTGGGAACGTCGCAGCGATTTTGGAGTTCGATGAGAGGTGCGTCCAGTCC
TTTAAGATCTTTGAGGCAGCGCCTCAGGAGGTCCGAGGGGTGCCACAGAA
GAACCCAGCACCGGATTACTTTTTGTAAATCCGCGTGATAGACCGCAAGC
AAGAGGTGCCTCACGAGGGCGCCATGTGCGACCTTATGTGGTCCGATCCC
GAGGAGATCGATGGGTGGGGCCTAAGCCCACGCGGGGCCGGGTATCAATT
CGGAGGGGACGTGGTTGAGAAGTTTAATCAGATGAATGGCCTGCGCTTGA
TTGCACGCGCGCATCAGCTGGTCTATGGGTTCTACGATGAGTGCTTACGA
AAGTACGGCAGCGTTAATGTCTGGCGCTACTGCACCGAAATCTTCGATTA
CTTGAGCTTGTCGGCCATTATAGACGATAACATCTTTTGCGTCCATGGTG
GCTTGAGCCCATCGATCAACACCATTGACCAGCTATTCAGGGTCGGTGGC
GACTGCCCCGAGCGCAACTACCTTTTCCTCGGGGATTTTGTGGACCGCGG
TTACTACTCTGTCGAAACGTTTCTACTCTTGCTCGCTCTGAAGGTGCGAT
ACCCTCAAAGAATCACTCTGATACGAGGCAACCATGAGAGCAGGCAGATC
ACGCAGGCGGTGCGAATACTTAAAGGAGCAAGAGGTAAAGGTGTTGTGCC
AGAAGGCCCGGGAAATTCTAGTGGACGAGTCGAACGTCCAGAAGGTCGAT
GCTCCCGTCACAATATGCGGGGATATCCACGGGCAATTTTATGATTTGAT
GGAGATGGCATCCACCAGCGACTTGGACGAGCAGATTGAGAGGCTTAGGT
CATGGAAGGGCACAAGGAAATGTTCAACAACCAACTTGTCACCATTTGGT
CCGCGCCCAATTACTGCTATCGGTGTGGGAACGTCGCAGCGATTTTGGAG
TTCGATGAGAGGTGCGTCCAGTCCTTTAAGATCTTTGAGGCAGCGCCTCA
GGAGGTCCGAGGGGTGCCACAGAAGAACCCAGCACCGGATTACTTTTTGT
AAATCCGCGTGATAGACCGCAAGCAAGAGGTGCCTCACGAGGGCGCCATG
TGCGACCTTATGTGGTCCGATCCCGAGGAGATCGATGGGTGGGGCCTAAG
CCCACGCGGGGCCGGGTATCAATTCGGAGGGGACGTGGTTGAGAAGTTTA
ATCAGATGAATGGCCTGCGCTTGATTGCACGCGCGCATCAGCTGGTCTAT
GGGTTCTACGATGAGTGCTTACGAAAGTACGGCAGCGTTAATGTCTGGCG
CTACTGCACCGAAATCTTCGATTACTTGAGCTTGTCGGCCATTATAGACG
ATAACATCTTTTGCGTCCATGGTGGCTTGAGCCCATCGATCAACACCATT
GACCAGCTATTCAGGGTCGGTGGCGACTGCCCCGAGCGCAACTACCTTTT
CCTCGGGGATTTTGTGGACCGCGGTTACTACTCTGTCGAAACGTTTCTAC
TCTTGCTCGCTCTGAAGGTGCGATACCCTCAAAGAATCACTCTGATACGA
GGCAACCATGAGAGCAGGCAGATCACGCAGGCGGTGCGAATACTTAAAGG
AGCAAGAGGTAAAGGTGTTGTGCCAGAAGGCCCGGGAAATTCTAGTGGAC
GAGTCGAACGTCCAGAAGGTCGATGCTCCCGTCACAATATGCGGGGATAT
CCACGGGCAATTTTATGATTTGATGGAGATGGCATCCACCAGCGACTTGG
ACGAGCAGATTGAGAGGCTTAGGTCATGGAAGGGCACAAGGAAATGTTCA
ACAACCAACTTGTCACCATTTGGTCCGCGCCCAATTACTGCTATCGGTGT
GGGAACGTCGCAGCGATTTTGGAGTTCGATGAGAGGTGCGTCCAGTCCTT
TAAGATCTTTGAGGCAGCGCCTCAGGAGGTCCGAGGGGTGCCACAGAAGA
ACCCAGCACCGGATTACTTTTTGTAAATCCGCGTGATAGACCGCAAGCAA
GAGGTGCCTCACGAGGGCGCCATGTGCGACCTTATGTGGTCCGATCCCGA
GGAGATCGATGGGTGGGGCCTAAGCCCACGCGGGGCCGGGTATCAATTCG
GAGGGGACGTGGTTGAGAAGTTTAATCAGATGAATGGCCTGCGCTTGATT
GCACGCGCGCATCAGCTGGTCTATGGGTTCTACGATGAGTGCTTACGAAA
GTACGGCAGCGTTAATGTCTGGCGCTACTGCACCGAAATCTTCGATTACT
TGAGCTTGTCGGCCATTATAGACGATAACATCTTTTGCGTCCATGGTGGC
TTGAGCCCATCGATCAACACCATTGACCAGCTATTCAGGGTCGGTGGCGA
CTGCCCCGAGCGCAACTACCTTTTCCTCGGGGATTTTGTGGACCGCGGTT
ACTACTCTGTCGAAACGTTTCTACTCTTGCTCGCTCTGAAGGTGCGATAC
CCTCAAAGAATCACTCTGATACGAGGCAACCATGAGAGCAGGCAGATCAC
GCAGGCGGTGCGAATACTTAAAGGAGCAAGAGGTAAAGGTGTTGTGCCAG
AAGGCCCGGGAAATTCTAGTGGACGAGTCGAACGTCCAGAAGGTCGATGC
TCCCGTCACAATATGCGGGGATATCCACGGGCAATTTTATGATTTGATGG
AGATGGCATCCACCAGCGACTTGGACGAGCAGATTGAGAGGCTTAGGTCA
TGGAAGGGCACAAGGAAATGTTCAACAACCAACTTGTCACCATTTGGTCC
GCGCCCAATTACTGCTATCGGTGTGGGAACGTCGCAGCGATTTTGGAGTT
CGATGAGAGGTGCGTCCAGTCCTTTAAGATCTTTGAGGCAGCGCCTCAGG
AGGTCCGAGGGGTGCCACAGAAGAACCCAGCACCGGATTACTTTTTGTAA
ATCCGCGTGATAGACCGCAAGCAAGAGGTGCCTCACGAGGGCGCCATGTG
CGACCTTATGTGGTCCGATCCCGAGGAGATCGATGGGTGGGGCCTAAGCC
CACGCGGGGCCGGGTATCAATTCGGAGGGGACGTGGTTGAGAAGTTTAAT
CAGATGAATGGCCTGCGCTTGATTGCACGCGCGCATCAGCTGGTCTATGG
GTTCTACGATGAGTGCTTACGAAAGTACGGCAGCGTTAATGTCTGGCGCT
ACTGCACCGAAATCTTCGATTACTTGAGCTTGTCGGCCATTATAGACGAT
AACATCTTTTGCGTCCATGGTGGCTTGAGCCCATCGATCAACACCATTGA
CCAGCTATTCAGGGTCGGTGGCGACTGCCCCGAGCGCAACTACCTTTTCC
TCGGGGATTTTGTGGACCGCGGTTACTACTCTGTCGAAACGTTTCTACTC
TTGCTCGCTCTGAAGGTGCGATACCCTCAAAGAATCACTCTGATACGAGG
CAACCATGAGAGCAGGCAGATCACGCAGGCGGTGCGAATACTTAAAGGAG
CAAGAGGTAAAGGTGTTGTGCCAGAAGGCCCGGGAAATTCTAGTGGACGA
GTCGAACGTCCAGAAGGTCGATGCTCCCGTCACAATATGCGGGGATATCC
ACGGGCAATTTTATGATTTGATGGAGATGGCATCCACCAGCGACTTGGAC
GAGCAGATTGAGAGGCTTAGGTCATGGAAGGGCACAAGGAAATGTTCAAC
AACCAACTTGTCACCATTTGGTCCGCGCCCAATTACTGCTATCGGTGTGG
GAACGTCGCAGCGATTTTGGAGTTCGATGAGAGGTGCGTCCAGTCCTTTA
AGATCTTTGAGGCAGCGCCTCAGGAGGTCCGAGGGGTGCCACAGAAGAAC
CCAGCACCGGATTACTTTTTGTAAATCCGCGTGATAGACCGCAAGCAAGA
GGTGCCTCACGAGGGCGCCATGTGCGACCTTATGTGGTCCGATCCCGAGG
AGATCGATGGGTGGGGCCTAAGCCCACGCGGGGCCGGGTATCAATTCGGA
GGGGACGTGGTTGAGAAGTTTAATCAGATGAATGGCCTGCGCTTGATTGC
ACGCGCGCATCAGCTGGTCTATGGGTTCTACGATGAGTGCTTACGAAAGT
ACGGCAGCGTTAATGTCTGGCGCTACTGCACCGAAATCTTCGATTACTTG
AGCTTGTCGGCCATTATAGACGATAACATCTTTTGCGTCCATGGTGGCTT
GAGCCCATCGATCAACACCATTGACCAGCTATTCAGGGTCGGTGGCGACT
GCCCCGAGCGCAACTACCTTTTCCTCGGGGATTTTGTGGACCGCGGTTAC
TACTCTGTCGAAACGTTTCTACTCTTGCTCGCTCTGAAGGTGCGATACCC
TCAAAGAATCACTCTGATACGAGGCAACCATGAGAGCAGGCAGATCACGC
AGGCGGTGCGAATACTTAAAGGAGCAAGAGGTAAAGGTGTTGTGCCAGAA
GGCCCGGGAAATTCTAGTGGACGAGTCGAACGTCCAGAAGGTCGATGCTC
CCGTCACAATATGCGGGGATATCCACGGGCAATTTTATGATTTGATGGAG
ATGGCATCCACCAGCGACTTGGACGAGCAGATTGAGAGGCTTAG back to top
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