Properties
| Property Name | Value |
|---|
| TranscriptId | 22571 |
| Track | FilteredModels2 |
| ProteinId | 22485 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:426955..428241 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4373 ID=mRNA_4373|Name=jgi.p|Nanoce1779_2|22485|organism=Nannochloropsis oceanica|type=mRNA|length=982bp
TCCCCGTGGGAGTGGCGCGGCGGAGTGTCGTGCATGGGGTAGCCGGACGC
CAGAGCGACCGCGTTTGAACCGTCATCCGCCCGAGTCCTTCTCTTCAATA
TTCTATTCAACCAAGTGAACCCTCAAACAAACGCTCTGTACACACGGCAA
CAATACAGCCACACATTAGCAAACCGCTTTGCAGCCATGCTTTACCTGCG
TTTCTCTGTCCTCGCCCTCCTGGCCGCCTCTGCCTTTTCCTTCATGCCCC
CTACCCCTCGTGTCGCTCGCCCCGCCTTGACTGCCGTCTACGCGGAGAAG
AATATCATCGTGCAAGCTGACACCTGCCTGAACGGTGAGTGCAGCATTGA
TGACGTAAACGACTTGCTGATCCAGCTCCGCGTGCAAGTCAAGAACCTGA
AGTCGCAAGTGGGGGAGTTGGAAAAGTACGAGCAGCAACTGACTCAAATG
AACGGCACGCCAGCGGCGCGGGACGCATTGAAAGACATCATCAAGGCAGT
CTTGAGGGCGATGGACGTGGACCCAGAAGACACTAACTTCCCCCAGATCG
TCAAGGCGGCTGGCTTTGCCGGGGACAAGTTTAGAGGGAAGGGCTCGTAT
GATGGCATGCCCTACAAGAAGGCGTAAGCCAGAGGACCTGAGACACGTAG
AGAGAGGAGATGAGAGGATACTTACAATTGCACACACAGGTCTGCTAGCC
ATCAGCCAGTGCGAAACTAGAAGGGAGGTGGAGGGAGGATGGGAGAAAGG
GAGGAAAGAAAATGGGAGAAGGTTCCTACCTTGGCCATCCACTTTTCCAT
CCATTCATTTATACGGTGATGCTTAATTTGTTCAACTTTTGCTACATCTT
GCTATTGTTCAACAACACTTAGATACAGCAGCAGACAGCAGACACACGAC
TACGAGTGCAAATTAAAAAAAGACCCAACAATTGCGACAAATATATGTGG
TGGTGATGCAATTCACTGTGCCCGAGATATTC back to topprotein sequence of jgi.p|Nanoce1779_2|22485 >mRNA_4373-protein ID=mRNA_4373-protein|Name=jgi.p|Nanoce1779_2|22485|organism=Nannochloropsis oceanica|type=polypeptide|length=147bp
MLYLRFSVLALLAASAFSFMPPTPRVARPALTAVYAEKNIIVQADTCLNG
ECSIDDVNDLLIQLRVQVKNLKSQVGELEKYEQQLTQMNGTPAARDALKD
IIKAVLRAMDVDPEDTNFPQIVKAAGFAGDKFRGKGSYDGMPYKKA* back to topmRNA from alignment at scaffold_10:426955..428241+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4373 ID=mRNA_4373|Name=jgi.p|Nanoce1779_2|22485|organism=Nannochloropsis oceanica|type=mRNA|length=1287bp|location=Sequence derived from alignment at scaffold_10:426955..428241+ (Nannochloropsis oceanica)
TCCCCGTGGGAGTGGCGCGGCGGAGTGTCGTGCATGGGGTAGCCGGACGC
CAGAGCGACCGCGTTTGAACCGTCATCCGCCCGAGTCCTTCTCTTCAATA
TTCTATTCAACCAAGTGAACCCTCAAACAAACGCTCTGTACACACGGCAA
CAATACAGCCACACATTAGCAAACCGCTTTGCAGCCATGCTTTACCTGCG
TTTCTCTGTCCTCGCCCTCCTGGCCGCCTCTGCCTTTTCCTTCATGCCCC
CTACCCCTCGTGTCGCTCGCCCCGCCTTGACTGCCGTCTACGCGGAGAAG
AATATCATCGTGGTACGTCCCCGTCCTCTGCACTGATCATGTATCGACCA
ATTCAGCATAGAAATAAACCACATTGTCGTCCTCAAAGCATGGGTTTGCC
TCTGTCGGTTTCGCCTCCGTACTTTGCCACACCTCACTCCCCCTCGCCCT
TCTTCAACATTCTGACTTCATCGCCACTCATCTAAACTACACCTCTACCC
CACACATGACAGCAAGCTGACACCTGCCTGAACGGTGAGTGCAGCATTGA
TGACGTAAACGACTTGCTGATCCAGCTCCGCGTGCAAGTCAAGAACCTGA
AGTCGCAAGTGGGGGAGTTGGAAAAGTACGAGCAGCAACTGACTCAAATG
AACGGCACGCCAGCGGCGCGGGACGCATTGAAAGACATCATCAAGGTAGG
AACCTAGGAGGAACAAAAGACAAGAAAGAAGGAAGAAAACGGTCTCATAC
CTCTTCCCTACCCTCCCCCTTACATTTATTTTAATCTCATGCCTCCACAG
GCAGTCTTGAGGGCGATGGACGTGGACCCAGAAGACACTAACTTCCCCCA
GATCGTCAAGGCGGCTGGCTTTGCCGGGGACAAGTTTAGAGGGAAGGGCT
CGTATGATGGCATGCCCTACAAGAAGGCGTAAGCCAGAGGACCTGAGACA
CGTAGAGAGAGGAGATGAGAGGATACTTACAATTGCACACACAGGTCTGC
TAGCCATCAGCCAGTGCGAAACTAGAAGGGAGGTGGAGGGAGGATGGGAG
AAAGGGAGGAAAGAAAATGGGAGAAGGTTCCTACCTTGGCCATCCACTTT
TCCATCCATTCATTTATACGGTGATGCTTAATTTGTTCAACTTTTGCTAC
ATCTTGCTATTGTTCAACAACACTTAGATACAGCAGCAGACAGCAGACAC
ACGACTACGAGTGCAAATTAAAAAAAGACCCAACAATTGCGACAAATATA
TGTGGTGGTGATGCAATTCACTGTGCCCGAGATATTC back to topCoding sequence (CDS) from alignment at scaffold_10:426955..428241+ >mRNA_4373 ID=mRNA_4373|Name=jgi.p|Nanoce1779_2|22485|organism=Nannochloropsis oceanica|type=CDS|length=1323bp|location=Sequence derived from alignment at scaffold_10:426955..428241+ (Nannochloropsis oceanica)
ATGCTTTACCTGCGTTTCTCTGTCCTCGCCCTCCTGGCCGCCTCTGCCTT
TTCCTTCATGCCCCCTACCCCTCGTGTCGCTCGCCCCGCCTTGACTGCCG
TCTACGCGGAGAAGAATATCATCGTGCAAGCTGACACCTGCCTGAACGGT
GAGTGCAGCATTGATGACGTAAACGACTTGCTGATCCAGCTCCGCGTGCA
AGTCAAGAACCTGAAGTCGCAAGTGGGGGAGTTGGAAAAGTACGAGCAGC
AACTGACTCAAATGAACGGCACGCCAGCGGCGCGGGACGCATTGAAAGAC
ATCATCAAGGCAGTCTTGAGGGCGATGGACGTGGACCCAGAAGACACTAA
CTTCCCCCAGATCGTCAAGGCGGCTGGCTTTGCCGGGGACAAGTTTAGAG
GGAAGGGCTCGTATGATGGCATGCCCTACAAGAAGGCGTAAATGCTTTAC
CTGCGTTTCTCTGTCCTCGCCCTCCTGGCCGCCTCTGCCTTTTCCTTCAT
GCCCCCTACCCCTCGTGTCGCTCGCCCCGCCTTGACTGCCGTCTACGCGG
AGAAGAATATCATCGTGCAAGCTGACACCTGCCTGAACGGTGAGTGCAGC
ATTGATGACGTAAACGACTTGCTGATCCAGCTCCGCGTGCAAGTCAAGAA
CCTGAAGTCGCAAGTGGGGGAGTTGGAAAAGTACGAGCAGCAACTGACTC
AAATGAACGGCACGCCAGCGGCGCGGGACGCATTGAAAGACATCATCAAG
GCAGTCTTGAGGGCGATGGACGTGGACCCAGAAGACACTAACTTCCCCCA
GATCGTCAAGGCGGCTGGCTTTGCCGGGGACAAGTTTAGAGGGAAGGGCT
CGTATGATGGCATGCCCTACAAGAAGGCGTAAATGCTTTACCTGCGTTTC
TCTGTCCTCGCCCTCCTGGCCGCCTCTGCCTTTTCCTTCATGCCCCCTAC
CCCTCGTGTCGCTCGCCCCGCCTTGACTGCCGTCTACGCGGAGAAGAATA
TCATCGTGCAAGCTGACACCTGCCTGAACGGTGAGTGCAGCATTGATGAC
GTAAACGACTTGCTGATCCAGCTCCGCGTGCAAGTCAAGAACCTGAAGTC
GCAAGTGGGGGAGTTGGAAAAGTACGAGCAGCAACTGACTCAAATGAACG
GCACGCCAGCGGCGCGGGACGCATTGAAAGACATCATCAAGGCAGTCTTG
AGGGCGATGGACGTGGACCCAGAAGACACTAACTTCCCCCAGATCGTCAA
GGCGGCTGGCTTTGCCGGGGACAAGTTTAGAGGGAAGGGCTCGTATGATG
GCATGCCCTACAAGAAGGCGTAA back to top
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