Properties
| Property Name | Value |
|---|
| TranscriptId | 588867 |
| Track | FilteredModels2 |
| ProteinId | 588781 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:323595..324930 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4337 ID=mRNA_4337|Name=jgi.p|Nanoce1779_2|588781|organism=Nannochloropsis oceanica|type=mRNA|length=1336bp
TGGGTGCGGCGTTAGGGGCGGGGATGAATCCTGCTGTTGCTGGAGGGTTG
TTTGCTGCTGCTGGACACTCTAAGGGACTCCTGGCTCGGTTGGGGGTGCC
CTTGATGGCGACTGTCCCGGCGGCGTTGTTTTTCCGGTGCACTGATATCG
ATGAGACGTATACGATGAAGAGGGGGATGATGCCGAAGATTCCGGCGGAT
TTTGTGCGAAATCGCGGCCCATATCTGACAGAGCTTGCCGGGACATTCCT
ATTGACGAGCACGGTGGGCTTGGCGCTGGCTACTAAGGCATTGCCTGTGC
CTGTGGCGGCCGGTCTTTGCATGACCTTCCTGGCGTTCGGATCCGGGTAT
GTGAGTGGCGCGCATGTCAATCCGGCAGTGACCCTGGGGGTGTACCTGCG
GAATGCCAAAAAAATAGGCTCGAAGAAGCTGGGAGGTTATGTGGTGATGC
AGATTGTTGGTGCTGTTGGCGCTGGTGCGGTGGTGAAGGCTGCTTTGGGT
CCGGGGATGGTGGCGGGAAAATTTCCGGTGCCTCAGGCGGGATTTTCGTC
TGCTCAGGTGTTTGGGACCGAGGCCTTGTTCACGGGGCTGGTGGTCTCGA
CGGTGCTGCACGTGGGGGCAGCGACCGGCTACCAGGGGACTCAACTCAAT
GGCTTGGCCGTGTCCATGTCGCTGGGAGCAGGGATGATGGTTAGCGAGAT
GATCAGTGGTGGGAGCTTGAATCCGGCAGCCGCCATGGGGTTGGCGTTGA
GCAATGGAGCAACGGGAAAGCAGCTGCGACAGCTGTGGATGTACGTCATA
GCGCCCTTGGTGGGGGCAGTTTTTGGGCATGCGAGCATGAAGATAACATC
ACCGTTTGATATGGGTAAGGAATGAGGAGGGAGTGAAGAATAAATGTGTC
AATAATGCGGTAAAGATGTGTTTTCAAAGGCAACATGTTCTAGAGAGGCT
GCTTCTGCCCCAAAGCTATTTTGAGACCAGAAAAGAGCGGGATGAATATC
CCTGATGCTCAGCGGAAACGTTGAGATCAGCCAAGGTCAACAGAATGGGG
ATCTTCTATTTAAAAAATGGAAATGAGATGGTTGTTTTGGACCGCAAATG
GGGAAACAATAGAAGATGAATCAGCCCTTCCAGGGTTGCTGTGTCGAAAA
TGTGAGCCACTTGGTGGGTCTGGGCCAAAAAAAGGCAAATGTTTCAGGGA
GAGAACTCTTTGAATACGAAAAGAGCTTATTAGATAAGGCAATTAAGCAC
AATTTATGGGCCATCCAAGGACTTGGCTGGTGAAAAACCTGTCAAAGCCA
TAAAAACTCGGCAAAATAAGGGGAAGAATAATAAGT back to topprotein sequence of jgi.p|Nanoce1779_2|588781 >mRNA_4337-protein ID=mRNA_4337-protein|Name=jgi.p|Nanoce1779_2|588781|organism=Nannochloropsis oceanica|type=polypeptide|length=284bp
MNPAVAGGLFAAAGHSKGLLARLGVPLMATVPAALFFRCTDIDETYTMKR
GMMPKIPADFVRNRGPYLTELAGTFLLTSTVGLALATKALPVPVAAGLCM
TFLAFGSGYVSGAHVNPAVTLGVYLRNAKKIGSKKLGGYVVMQIVGAVGA
GAVVKAALGPGMVAGKFPVPQAGFSSAQVFGTEALFTGLVVSTVLHVGAA
TGYQGTQLNGLAVSMSLGAGMMVSEMISGGSLNPAAAMGLALSNGATGKQ
LRQLWMYVIAPLVGAVFGHASMKITSPFDMGKE* back to topmRNA from alignment at scaffold_10:323595..324930- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4337 ID=mRNA_4337|Name=jgi.p|Nanoce1779_2|588781|organism=Nannochloropsis oceanica|type=mRNA|length=1336bp|location=Sequence derived from alignment at scaffold_10:323595..324930- (Nannochloropsis oceanica)
TGGGTGCGGCGTTAGGGGCGGGGATGAATCCTGCTGTTGCTGGAGGGTTG
TTTGCTGCTGCTGGACACTCTAAGGGACTCCTGGCTCGGTTGGGGGTGCC
CTTGATGGCGACTGTCCCGGCGGCGTTGTTTTTCCGGTGCACTGATATCG
ATGAGACGTATACGATGAAGAGGGGGATGATGCCGAAGATTCCGGCGGAT
TTTGTGCGAAATCGCGGCCCATATCTGACAGAGCTTGCCGGGACATTCCT
ATTGACGAGCACGGTGGGCTTGGCGCTGGCTACTAAGGCATTGCCTGTGC
CTGTGGCGGCCGGTCTTTGCATGACCTTCCTGGCGTTCGGATCCGGGTAT
GTGAGTGGCGCGCATGTCAATCCGGCAGTGACCCTGGGGGTGTACCTGCG
GAATGCCAAAAAAATAGGCTCGAAGAAGCTGGGAGGTTATGTGGTGATGC
AGATTGTTGGTGCTGTTGGCGCTGGTGCGGTGGTGAAGGCTGCTTTGGGT
CCGGGGATGGTGGCGGGAAAATTTCCGGTGCCTCAGGCGGGATTTTCGTC
TGCTCAGGTGTTTGGGACCGAGGCCTTGTTCACGGGGCTGGTGGTCTCGA
CGGTGCTGCACGTGGGGGCAGCGACCGGCTACCAGGGGACTCAACTCAAT
GGCTTGGCCGTGTCCATGTCGCTGGGAGCAGGGATGATGGTTAGCGAGAT
GATCAGTGGTGGGAGCTTGAATCCGGCAGCCGCCATGGGGTTGGCGTTGA
GCAATGGAGCAACGGGAAAGCAGCTGCGACAGCTGTGGATGTACGTCATA
GCGCCCTTGGTGGGGGCAGTTTTTGGGCATGCGAGCATGAAGATAACATC
ACCGTTTGATATGGGTAAGGAATGAGGAGGGAGTGAAGAATAAATGTGTC
AATAATGCGGTAAAGATGTGTTTTCAAAGGCAACATGTTCTAGAGAGGCT
GCTTCTGCCCCAAAGCTATTTTGAGACCAGAAAAGAGCGGGATGAATATC
CCTGATGCTCAGCGGAAACGTTGAGATCAGCCAAGGTCAACAGAATGGGG
ATCTTCTATTTAAAAAATGGAAATGAGATGGTTGTTTTGGACCGCAAATG
GGGAAACAATAGAAGATGAATCAGCCCTTCCAGGGTTGCTGTGTCGAAAA
TGTGAGCCACTTGGTGGGTCTGGGCCAAAAAAAGGCAAATGTTTCAGGGA
GAGAACTCTTTGAATACGAAAAGAGCTTATTAGATAAGGCAATTAAGCAC
AATTTATGGGCCATCCAAGGACTTGGCTGGTGAAAAACCTGTCAAAGCCA
TAAAAACTCGGCAAAATAAGGGGAAGAATAATAAGT back to topCoding sequence (CDS) from alignment at scaffold_10:323595..324930- >mRNA_4337 ID=mRNA_4337|Name=jgi.p|Nanoce1779_2|588781|organism=Nannochloropsis oceanica|type=CDS|length=852bp|location=Sequence derived from alignment at scaffold_10:323595..324930- (Nannochloropsis oceanica)
ATGAATCCTGCTGTTGCTGGAGGGTTGTTTGCTGCTGCTGGACACTCTAA
GGGACTCCTGGCTCGGTTGGGGGTGCCCTTGATGGCGACTGTCCCGGCGG
CGTTGTTTTTCCGGTGCACTGATATCGATGAGACGTATACGATGAAGAGG
GGGATGATGCCGAAGATTCCGGCGGATTTTGTGCGAAATCGCGGCCCATA
TCTGACAGAGCTTGCCGGGACATTCCTATTGACGAGCACGGTGGGCTTGG
CGCTGGCTACTAAGGCATTGCCTGTGCCTGTGGCGGCCGGTCTTTGCATG
ACCTTCCTGGCGTTCGGATCCGGGTATGTGAGTGGCGCGCATGTCAATCC
GGCAGTGACCCTGGGGGTGTACCTGCGGAATGCCAAAAAAATAGGCTCGA
AGAAGCTGGGAGGTTATGTGGTGATGCAGATTGTTGGTGCTGTTGGCGCT
GGTGCGGTGGTGAAGGCTGCTTTGGGTCCGGGGATGGTGGCGGGAAAATT
TCCGGTGCCTCAGGCGGGATTTTCGTCTGCTCAGGTGTTTGGGACCGAGG
CCTTGTTCACGGGGCTGGTGGTCTCGACGGTGCTGCACGTGGGGGCAGCG
ACCGGCTACCAGGGGACTCAACTCAATGGCTTGGCCGTGTCCATGTCGCT
GGGAGCAGGGATGATGGTTAGCGAGATGATCAGTGGTGGGAGCTTGAATC
CGGCAGCCGCCATGGGGTTGGCGTTGAGCAATGGAGCAACGGGAAAGCAG
CTGCGACAGCTGTGGATGTACGTCATAGCGCCCTTGGTGGGGGCAGTTTT
TGGGCATGCGAGCATGAAGATAACATCACCGTTTGATATGGGTAAGGAAT
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