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Properties
| Property Name | Value |
|---|
| TranscriptId | 588833 |
| Track | FilteredModels2 |
| ProteinId | 588747 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:301509..303080 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4325 ID=mRNA_4325|Name=jgi.p|Nanoce1779_2|588747|organism=Nannochloropsis oceanica|type=mRNA|length=1103bp
GTGCCATTCCTCTACCCCACCGCCCTGCTGCTTAGCCGGTCTCATCCATG
TGAAATGTCTTGCTCTTGCACATCTGCTAGAGGAAGGCGATGAACACACG
TTAACGCTTGGATAAGAAGCATGCCGTGAAGAAGTGAAGGTCGACTTCCT
CCCACCCTTCCCTTGCCTCCTCCACCAGCGGCTGGCGAAGAACGAGAGGA
GGGGCTGAGGGTGGTCTCCAATGGAGCTCGTAATGATTAGAAACTTGCTT
TTCCAAAGCATGGACTGGACTCTAACCTTCATAAGAAGGAGGGCATGACA
GCCTACTTATTCCTGTGGTTATGATCGAGCTCTCAGAACCATCGGCCTTC
TCACGCCAACCCTACGCGCACGGAGGTGTCTTCATGCCTCCCCTCCCTTC
CTCACATCGCACTCATTGTCTGATGCCTTCCAACGATTCCCACCACCAAC
ACCATACAGGGTCCGTCTCACAACTATGGGGATTGATCTCAAGAGCGGTG
GCCGCCGCACGGGGCACAAGACTCGTACGGCCCCCAAGTCCGACAACGTC
TACCTGAAGCTCTTAGTCAAGCTCTACCGGTTCCTGGCCCGTCGTACCGA
CTCCTCCTTCAACGCCGTGGTGCTCAAGCGTTTGTTTATGTCCAAGACGA
ACCGTCCCCCTATCGCCATCTCCCGGCTCGTCCGTCACATGAAGGGGAAG
GAGGGGAAGACTGCTGTCATTGTCGGGACCATCACCGACGATGCGCGCAT
GCTCGAGGTGCCCAAGCTGAGCGTTGCTGCCCTTAAGGTGACGGCCACGG
CCCGCGCACGTATCCTCCAGGCAGGCGGCGAGATTTTGACGTTTGATGAG
CTGGCCCTGCGAGCGCCCAAGGGAACTAATTGTGTGTTGCTGCGTGGGCC
GCACGATCGGGAGGCATTGTCCCACTTTGGGCATCGCTCGACGGTGGGTA
ACGTGCACACGCACGACAATGTCAAGCCGTACACTCGGGCCAAGGGGAGG
AAGTTCGAGAAGGCCCGTGGGCGTCGGCGCTCGACTGGATTCAAGATCTA
AGGCGGAAGAGGGCGCGAGGGAGGGAAGGAGGGCGGGCGGGAGGGCTGAA
GGG back to topprotein sequence of jgi.p|Nanoce1779_2|588747 >mRNA_4325-protein ID=mRNA_4325-protein|Name=jgi.p|Nanoce1779_2|588747|organism=Nannochloropsis oceanica|type=polypeptide|length=192bp
MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSSFNAVVL
KRLFMSKTNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSV
AALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHDREALSH
FGHRSTVGNVHTHDNVKPYTRAKGRKFEKARGRRRSTGFKI* back to topmRNA from alignment at scaffold_10:301509..303080- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4325 ID=mRNA_4325|Name=jgi.p|Nanoce1779_2|588747|organism=Nannochloropsis oceanica|type=mRNA|length=1572bp|location=Sequence derived from alignment at scaffold_10:301509..303080- (Nannochloropsis oceanica)
GTGCCATTCCTCTACCCCACCGCCCTGCTGCTTAGCCGGTCTCATCCATG
TGAAATGTCTTGCTCTTGCACATCTGCTAGAGGAAGGCGATGAACACACG
TTAACGCTTGGATAAGAAGCATGCCGTGAAGAAGTGAAGGTCGACTTCCT
CCCACCCTTCCCTTGCCTCCTCCACCAGCGGCTGGCGAAGAACGAGAGGA
GGGGCTGAGGGTGGTCTCCAATGGAGCTCGTAATGATTAGAAACTTGCTT
TTCCAAAGCATGGACTGGACTCTAACCTTCATAAGAAGGAGGGCATGACA
GCCTACTTATTCCTGTGGTTATGATCGAGCTCTCAGAACCATCGGCCTTC
TCACGCCAACCCTACGCGCACGGAGGTGTCTTCATGCCTCCCCTCCCTTC
CTCACATCGCACTCATTGTCTGATGCCTTCCAACGATTCCCACCACCAAC
ACCATACAGGGTCCGTCTCACAACTATGGGGATTGATCTCAAGAGCGGTG
GCCGCCGCACGGGGCACAAGGTGCGTTTGATGCCGTGGAGTTTTGGAAAG
GGGGGGAAGGGAGGGAGGGAGGGAGGGAGAGAGAGAGGGCTGTCTTTCGC
GGACGTGATGTAGAGATTGGAGAAACACGCTGCCCCGTTTGTTGGAGGTC
CCCTGTGCCTTGACAGACAGGTATGATCGCGACGACGTATCTGGGCGTCT
ATAGTGGAGCAGCTGTGGAGGACGAGTCGTAGACAAGCGTTGAGAGGTGG
ACGAGACGGAGGTGATGACGGTTATGAACGATGGATCCCCTGGTTTGAGA
GTTTGATAGTGTGGATGGCGAAGCCAGGCCTCAGCCTTAATATCATGCAT
TACCAAGGATAAACTGTGGTCGTGCAAGTATATAAGTATTCAACACCCTT
CTAAAGGTGCCTGAACCACTCTCAATTGTGTCGTGCACTCCCCCTTCCTC
CCCCCCTCTCCTTCTCTTTCTCCCCTCTCTCTCCAACAGACTCGTACGGC
CCCCAAGTCCGACAACGTCTACCTGAAGCTCTTAGTCAAGCTCTACCGGT
TCCTGGCCCGTCGTACCGACTCCTCCTTCAACGCCGTGGTGCTCAAGCGT
TTGTTTATGTCCAAGACGAACCGTCCCCCTATCGCCATCTCCCGGCTCGT
CCGTCACATGAAGGGGAAGGAGGGGAAGACTGCTGTCATTGTCGGGACCA
TCACCGACGATGCGCGCATGCTCGAGGTGCCCAAGCTGAGCGTTGCTGCC
CTTAAGGTGACGGCCACGGCCCGCGCACGTATCCTCCAGGCAGGCGGCGA
GATTTTGACGTTTGATGAGCTGGCCCTGCGAGCGCCCAAGGGAACTAATT
GTGTGTTGCTGCGTGGGCCGCACGATCGGGAGGCATTGTCCCACTTTGGG
CATCGCTCGACGGTGGGTAACGTGCACACGCACGACAATGTCAAGCCGTA
CACTCGGGCCAAGGGGAGGAAGTTCGAGAAGGCCCGTGGGCGTCGGCGCT
CGACTGGATTCAAGATCTAAGGCGGAAGAGGGCGCGAGGGAGGGAAGGAG
GGCGGGCGGGAGGGCTGAAGGG back to topCoding sequence (CDS) from alignment at scaffold_10:301509..303080- >mRNA_4325 ID=mRNA_4325|Name=jgi.p|Nanoce1779_2|588747|organism=Nannochloropsis oceanica|type=CDS|length=1152bp|location=Sequence derived from alignment at scaffold_10:301509..303080- (Nannochloropsis oceanica)
ACTCGTACGGCCCCCAAGTCCGACAACGTCTACCTGAAGCTCTTAGTCAA
GCTCTACCGGTTCCTGGCCCGTCGTACCGACTCCTCCTTCAACGCCGTGG
TGCTCAAGCGTTTGTTTATGTCCAAGACGAACCGTCCCCCTATCGCCATC
TCCCGGCTCGTCCGTCACATGAAGGGGAAGGAGGGGAAGACTGCTGTCAT
TGTCGGGACCATCACCGACGATGCGCGCATGCTCGAGGTGCCCAAGCTGA
GCGTTGCTGCCCTTAAGGTGACGGCCACGGCCCGCGCACGTATCCTCCAG
GCAGGCGGCGAGATTTTGACGTTTGATGAGCTGGCCCTGCGAGCGCCCAA
GGGAACTAATTGTGTGTTGCTGCGTGGGCCGCACGATCGGGAGGCATTGT
CCCACTTTGGGCATCGCTCGACGGTGGGTAACGTGCACACGCACGACAAT
GTCAAGCCGTACACTCGGGCCAAGGGGAGGAAGTTCGAGAAGGCCCGTGG
GCGTCGGCGCTCGACTGGATTCAAGATCTAAATGGGGATTGATCTCAAGA
GCGGTGGCCGCCGCACGGGGCACAAGACTCGTACGGCCCCCAAGTCCGAC
AACGTCTACCTGAAGCTCTTAGTCAAGCTCTACCGGTTCCTGGCCCGTCG
TACCGACTCCTCCTTCAACGCCGTGGTGCTCAAGCGTTTGTTTATGTCCA
AGACGAACCGTCCCCCTATCGCCATCTCCCGGCTCGTCCGTCACATGAAG
GGGAAGGAGGGGAAGACTGCTGTCATTGTCGGGACCATCACCGACGATGC
GCGCATGCTCGAGGTGCCCAAGCTGAGCGTTGCTGCCCTTAAGGTGACGG
CCACGGCCCGCGCACGTATCCTCCAGGCAGGCGGCGAGATTTTGACGTTT
GATGAGCTGGCCCTGCGAGCGCCCAAGGGAACTAATTGTGTGTTGCTGCG
TGGGCCGCACGATCGGGAGGCATTGTCCCACTTTGGGCATCGCTCGACGG
TGGGTAACGTGCACACGCACGACAATGTCAAGCCGTACACTCGGGCCAAG
GGGAGGAAGTTCGAGAAGGCCCGTGGGCGTCGGCGCTCGACTGGATTCAA
GATCTAAATGGGGATTGATCTCAAGAGCGGTGGCCGCCGCACGGGGCACA
AG back to top
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