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Properties
| Property Name | Value |
|---|
| TranscriptId | 588826 |
| Track | FilteredModels2 |
| ProteinId | 588740 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:296720..298213 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4323 ID=mRNA_4323|Name=jgi.p|Nanoce1779_2|588740|organism=Nannochloropsis oceanica|type=mRNA|length=1494bp
GGGGGAGGGGGGGGGGGGAGGTTCGGTGGTCACTCCAAAGCGAGGGGGCC
CGATGGGAGCAGTGGCTTTCGGCAGCGGCGTTGTCGGGAGAAGGCGGGAA
CAGTAGCAGAGAGAGTGAAGGAGGAAGAGGCGGATATAGCGAAGCAGGAA
GAGGAGAAGAAGAAGGAAGTCAAGGGTGGGGGAGGGGCAATGGCGAGGAT
TCTGGGCATGCTCTCGTTGAAGGGGAAGAAGGAAGATAAGGAGGAGAAGG
AGGAGAAGGAGGACGAGGCGGACAACACAATGGTAGCAAAGAACACAGCG
GGCGAAGCAGAAGGAGGGGTAGGGGTGGACGCCACGGGCAGCTTGAAGGG
CTTGCTGAAGTTGAATGGCAGTAACAACAACAACAGCACTCCTGCTCCTC
CCCCCTCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAACAGCAGCAGCACCAGGGCTTTCTCCCTTATCC
CCGCGGACCTGCCGGCCCCGGTGGCCCCGGGCCATTTTACCATCATCCTC
CTCAACCTCCCCCCCCTGGCGGCTACTACTTCCCTCCCTCCATGCCCGGA
GCTTTCATGCCCCCCATGATGATGCCTTACCACGGCGGCTCTCATCCTCC
TCCTCCTCAAGCCACCGTGGTGCCTCGGCGCCCACGGGAACGGCGTGTTG
TTAATATAGTGGGGACCGAGGGACCAGGGAGCGCCGGAGCGGAGGTCAAG
GCGGGGGGAGCGAACAACAACACCCCCACCACTACCACCAAGCCAGCCTA
CATCATGCCTAGCCAGGTCTTGAGGTCGGGCAGCGCGTCCAAGAAGGTGC
TTTCGACGAGCAGTGGTGCGGGAACGGGGGAAGAGAAGATTGTGGAAGGG
GCGAGTAGCGCTGAGAGGTAGATGGGGAGTGGATGTAGAGAGGAGGGAAG
AAAAACGACATGAAAAGGACGAAGAGAGAGAGAGAGATTTGAGGTGTGTG
GGTTAGATGAGGAGGGAATGTTAGTCAGAAAAATACTGCACTGATATACA
AGAATCAAGAGGAATTCTGTTGTCTTGTTGCTTTCGGTGTTTGTGTTGTC
AAGGTCGACCCAAGTAGGCAAGTACGTTCCCAGTTCATCGCCCGATCCCA
CTTCATTGCACCACATAATGACTCAGGGGACCTTCCAATGCCCGTAGATT
TAAAGTCTGGTACAAATTTTATAATTCAGTGTTGGTACCAATTTTATCAT
TCAGTGATTTAATTCGTTGCTGGAAGTGTTGGAGCGTGATGCGGTGTCTT
GGTACCCCCCCATGCCTTTCCTCCATGCCACTCTCTTTCTCCCTCTTAAT
TCTTCCAGTACATGAACAGCATCGCATCGCCTCGTCTATTGTCACCCAAG
TTTTGTTTCTATGTCTATAAATTTTTCCGCATTCTCGCCCAGGGTTGTCG
CCTCAGCCCCTCCTTCTCTCCTCATCCATCAACCCACCCATCAC back to topprotein sequence of jgi.p|Nanoce1779_2|588740 >mRNA_4323-protein ID=mRNA_4323-protein|Name=jgi.p|Nanoce1779_2|588740|organism=Nannochloropsis oceanica|type=polypeptide|length=244bp
MARILGMLSLKGKKEDKEEKEEKEDEADNTMVAKNTAGEAEGGVGVDATG
SLKGLLKLNGSNNNNSTPAPPPSQQQQQQQQQQQQQQQQQQQQQQQHQGF
LPYPRGPAGPGGPGPFYHHPPQPPPPGGYYFPPSMPGAFMPPMMMPYHGG
SHPPPPQATVVPRRPRERRVVNIVGTEGPGSAGAEVKAGGANNNTPTTTT
KPAYIMPSQVLRSGSASKKVLSTSSGAGTGEEKIVEGASSAER* back to topmRNA from alignment at scaffold_10:296720..298213+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4323 ID=mRNA_4323|Name=jgi.p|Nanoce1779_2|588740|organism=Nannochloropsis oceanica|type=mRNA|length=1494bp|location=Sequence derived from alignment at scaffold_10:296720..298213+ (Nannochloropsis oceanica)
GGGGGAGGGGGGGGGGGGAGGTTCGGTGGTCACTCCAAAGCGAGGGGGCC
CGATGGGAGCAGTGGCTTTCGGCAGCGGCGTTGTCGGGAGAAGGCGGGAA
CAGTAGCAGAGAGAGTGAAGGAGGAAGAGGCGGATATAGCGAAGCAGGAA
GAGGAGAAGAAGAAGGAAGTCAAGGGTGGGGGAGGGGCAATGGCGAGGAT
TCTGGGCATGCTCTCGTTGAAGGGGAAGAAGGAAGATAAGGAGGAGAAGG
AGGAGAAGGAGGACGAGGCGGACAACACAATGGTAGCAAAGAACACAGCG
GGCGAAGCAGAAGGAGGGGTAGGGGTGGACGCCACGGGCAGCTTGAAGGG
CTTGCTGAAGTTGAATGGCAGTAACAACAACAACAGCACTCCTGCTCCTC
CCCCCTCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAG
CAGCAGCAGCAGCAGCAACAGCAGCAGCACCAGGGCTTTCTCCCTTATCC
CCGCGGACCTGCCGGCCCCGGTGGCCCCGGGCCATTTTACCATCATCCTC
CTCAACCTCCCCCCCCTGGCGGCTACTACTTCCCTCCCTCCATGCCCGGA
GCTTTCATGCCCCCCATGATGATGCCTTACCACGGCGGCTCTCATCCTCC
TCCTCCTCAAGCCACCGTGGTGCCTCGGCGCCCACGGGAACGGCGTGTTG
TTAATATAGTGGGGACCGAGGGACCAGGGAGCGCCGGAGCGGAGGTCAAG
GCGGGGGGAGCGAACAACAACACCCCCACCACTACCACCAAGCCAGCCTA
CATCATGCCTAGCCAGGTCTTGAGGTCGGGCAGCGCGTCCAAGAAGGTGC
TTTCGACGAGCAGTGGTGCGGGAACGGGGGAAGAGAAGATTGTGGAAGGG
GCGAGTAGCGCTGAGAGGTAGATGGGGAGTGGATGTAGAGAGGAGGGAAG
AAAAACGACATGAAAAGGACGAAGAGAGAGAGAGAGATTTGAGGTGTGTG
GGTTAGATGAGGAGGGAATGTTAGTCAGAAAAATACTGCACTGATATACA
AGAATCAAGAGGAATTCTGTTGTCTTGTTGCTTTCGGTGTTTGTGTTGTC
AAGGTCGACCCAAGTAGGCAAGTACGTTCCCAGTTCATCGCCCGATCCCA
CTTCATTGCACCACATAATGACTCAGGGGACCTTCCAATGCCCGTAGATT
TAAAGTCTGGTACAAATTTTATAATTCAGTGTTGGTACCAATTTTATCAT
TCAGTGATTTAATTCGTTGCTGGAAGTGTTGGAGCGTGATGCGGTGTCTT
GGTACCCCCCCATGCCTTTCCTCCATGCCACTCTCTTTCTCCCTCTTAAT
TCTTCCAGTACATGAACAGCATCGCATCGCCTCGTCTATTGTCACCCAAG
TTTTGTTTCTATGTCTATAAATTTTTCCGCATTCTCGCCCAGGGTTGTCG
CCTCAGCCCCTCCTTCTCTCCTCATCCATCAACCCACCCATCAC back to topCoding sequence (CDS) from alignment at scaffold_10:296720..298213+ >mRNA_4323 ID=mRNA_4323|Name=jgi.p|Nanoce1779_2|588740|organism=Nannochloropsis oceanica|type=CDS|length=732bp|location=Sequence derived from alignment at scaffold_10:296720..298213+ (Nannochloropsis oceanica)
ATGGCGAGGATTCTGGGCATGCTCTCGTTGAAGGGGAAGAAGGAAGATAA
GGAGGAGAAGGAGGAGAAGGAGGACGAGGCGGACAACACAATGGTAGCAA
AGAACACAGCGGGCGAAGCAGAAGGAGGGGTAGGGGTGGACGCCACGGGC
AGCTTGAAGGGCTTGCTGAAGTTGAATGGCAGTAACAACAACAACAGCAC
TCCTGCTCCTCCCCCCTCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCACCAGGGCTTT
CTCCCTTATCCCCGCGGACCTGCCGGCCCCGGTGGCCCCGGGCCATTTTA
CCATCATCCTCCTCAACCTCCCCCCCCTGGCGGCTACTACTTCCCTCCCT
CCATGCCCGGAGCTTTCATGCCCCCCATGATGATGCCTTACCACGGCGGC
TCTCATCCTCCTCCTCCTCAAGCCACCGTGGTGCCTCGGCGCCCACGGGA
ACGGCGTGTTGTTAATATAGTGGGGACCGAGGGACCAGGGAGCGCCGGAG
CGGAGGTCAAGGCGGGGGGAGCGAACAACAACACCCCCACCACTACCACC
AAGCCAGCCTACATCATGCCTAGCCAGGTCTTGAGGTCGGGCAGCGCGTC
CAAGAAGGTGCTTTCGACGAGCAGTGGTGCGGGAACGGGGGAAGAGAAGA
TTGTGGAAGGGGCGAGTAGCGCTGAGAGGTAG back to top
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