Properties
| Property Name | Value |
|---|
| TranscriptId | 20758 |
| Track | FilteredModels2 |
| ProteinId | 20672 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:252170..253504 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4305 ID=mRNA_4305|Name=jgi.p|Nanoce1779_2|20672|organism=Nannochloropsis oceanica|type=mRNA|length=1131bp
CCCGCCTCTCCCCCCGTGTAAATCAGGATTCGATTATACAACGAGCAAAG
TATTGGAGGATGGAAGACCAACTGGTTGAAAAAGCGACTAGGCTCTTGAC
GAGCAAGTCCTTTCCCTTCTTGTTCCTTTTATATACAGGAAACCAGCCCT
GAGGACATACAAACCTTGCTCGCCTCCGACTTTACCATGCTCAGCACCGC
CCAACAACAAATCAACGACGTCCGCACCCGAACGCTGCGTCTTGCCACGG
CTGCCTATGATAAAGTGGACGATAGCATTCAGGCCTTAGACTGGGACATT
GGTATGCTGGAACCACAGATGGCAGCATCGGCTGCAGAGGACAATAGTTT
AGACCCTCAGATCCTGGCGATAAAGAGGAAGGAGCAACGGAAGGCACAGC
GGCAAGAAAAGCAACGCGCGAAGGAAATGGCCTCCAAAAAGAAGAAAAAA
TTGGGGAAAGGTGGGAAAGACATGTCCGGCGACCTGGGGCTAGTTCCTGC
TGTCGGACAAGGACAAGGCGCTCATGGCGCAGAAGAGGAAGTGGACCCGA
ATGAGCCGGTGTACTGTACATGCCAACGTGTCTCGTATGGCCAAATGGTG
GGGTGTGATAATGAGGAGTGTTCTTTCGAATGGTTTCACTTGGATTGTGT
GGGCTTGGTCGTGCCTCCGACGGGGAGTTGGTTGTGCCCGGACTGCTGTG
TGGAAAAAGGCGTCATCTACCAAGGAACGGCAGTGGCGCTACCACCACCG
CAGACGTCCAAGCCTCCGGTTAATGCTGTTTCTCCTATGGAGGTGGAGCA
GCAGGAGGAGCAGGGGAAGGAGCAGGCGCTGGAGCGAAGTGCGAAGGAGG
CTGCCGCCAGGGTGGTTGAAGAACAAGAAGGAGTGAAGGAAGGAGGAGAA
AAGTTGATGGAAGGGAAGGAGGCTGCACCACTAGACTCAGTATAGGAAGT
GGTATGAGTGTTTCAAGGGGACAGGGAACAAGAGGGCGGAGAGGGGGGGT
CTCACCAGTCGCCCGCATCGGAGGAAGTCACGACATGAAGTTTAAGTGGA
AATGGGGAGGTTGAGTGAGAGGGCAGACAGGCAAGATGAGGAGGATATTT
ACAAAAACCTCGCCCCGGAATATGCGACGAG back to topprotein sequence of jgi.p|Nanoce1779_2|20672 >mRNA_4305-protein ID=mRNA_4305-protein|Name=jgi.p|Nanoce1779_2|20672|organism=Nannochloropsis oceanica|type=polypeptide|length=253bp
MLSTAQQQINDVRTRTLRLATAAYDKVDDSIQALDWDIGMLEPQMAASAA
EDNSLDPQILAIKRKEQRKAQRQEKQRAKEMASKKKKKLGKGGKDMSGDL
GLVPAVGQGQGAHGAEEEVDPNEPVYCTCQRVSYGQMVGCDNEECSFEWF
HLDCVGLVVPPTGSWLCPDCCVEKGVIYQGTAVALPPPQTSKPPVNAVSP
MEVEQQEEQGKEQALERSAKEAAARVVEEQEGVKEGGEKLMEGKEAAPLD
SV* back to topmRNA from alignment at scaffold_10:252170..253504- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4305 ID=mRNA_4305|Name=jgi.p|Nanoce1779_2|20672|organism=Nannochloropsis oceanica|type=mRNA|length=1335bp|location=Sequence derived from alignment at scaffold_10:252170..253504- (Nannochloropsis oceanica)
CCCGCCTCTCCCCCCGTGTAAATCAGGATTCGATTATACAACGAGCAAAG
TATTGGAGGATGGAAGACCAACTGGTTGAAAAAGCGACTAGGCTCTTGAC
GAGCAAGGTAAAAAAGGGTGTGGAGAACGGGAGAGGCAGAAGAAGAAGGG
CAAGCGACCATGTAAAACGATCACGTCATACTTTTGTGTCTAAGTCCTAG
AGTCCTTTCCCTTCTTGTTCCTTTTATATACAGGAAACCAGCCCTGAGGA
CATACAAACCTTGCTCGCCTCCGACTTTACCATGCTCAGCACCGCCCAAC
AACAAATCAACGACGTCCGCACCCGAACGCTGCGTCTTGCCACGGCTGCC
TATGATAAAGTGGACGATAGCATTCAGGCCTTAGACTGGGACATTGGTAT
GCTGGAACCACAGATGGCAGCATCGGCTGCAGAGGACAATAGTTTAGACC
CTCAGATCCTGGCGATAAAGAGGAAGGAGCAACGGAAGGTGGGGAATGGA
GGGAGAAAAGGATGGCGGAAGGGTGGATTTGAATATCTTCTCTGCCTCTG
CAGCACGTTACTCAGCCCTCCCTCTGTCACCCTTCTGTAACACCCAGGCA
CAGCGGCAAGAAAAGCAACGCGCGAAGGAAATGGCCTCCAAAAAGAAGAA
AAAATTGGGGAAAGGTGGGAAAGACATGTCCGGCGACCTGGGGCTAGTTC
CTGCTGTCGGACAAGGACAAGGCGCTCATGGCGCAGAAGAGGAAGTGGAC
CCGAATGAGCCGGTGTACTGTACATGCCAACGTGTCTCGTATGGCCAAAT
GGTGGGGTGTGATAATGAGGAGTGTTCTTTCGAATGGTTTCACTTGGATT
GTGTGGGCTTGGTCGTGCCTCCGACGGGGAGTTGGTTGTGCCCGGACTGC
TGTGTGGAAAAAGGCGTCATCTACCAAGGAACGGCAGTGGCGCTACCACC
ACCGCAGACGTCCAAGCCTCCGGTTAATGCTGTTTCTCCTATGGAGGTGG
AGCAGCAGGAGGAGCAGGGGAAGGAGCAGGCGCTGGAGCGAAGTGCGAAG
GAGGCTGCCGCCAGGGTGGTTGAAGAACAAGAAGGAGTGAAGGAAGGAGG
AGAAAAGTTGATGGAAGGGAAGGAGGCTGCACCACTAGACTCAGTATAGG
AAGTGGTATGAGTGTTTCAAGGGGACAGGGAACAAGAGGGCGGAGAGGGG
GGGTCTCACCAGTCGCCCGCATCGGAGGAAGTCACGACATGAAGTTTAAG
TGGAAATGGGGAGGTTGAGTGAGAGGGCAGACAGGCAAGATGAGGAGGAT
ATTTACAAAAACCTCGCCCCGGAATATGCGACGAG back to topCoding sequence (CDS) from alignment at scaffold_10:252170..253504- >mRNA_4305 ID=mRNA_4305|Name=jgi.p|Nanoce1779_2|20672|organism=Nannochloropsis oceanica|type=CDS|length=1518bp|location=Sequence derived from alignment at scaffold_10:252170..253504- (Nannochloropsis oceanica)
GCACAGCGGCAAGAAAAGCAACGCGCGAAGGAAATGGCCTCCAAAAAGAA
GAAAAAATTGGGGAAAGGTGGGAAAGACATGTCCGGCGACCTGGGGCTAG
TTCCTGCTGTCGGACAAGGACAAGGCGCTCATGGCGCAGAAGAGGAAGTG
GACCCGAATGAGCCGGTGTACTGTACATGCCAACGTGTCTCGTATGGCCA
AATGGTGGGGTGTGATAATGAGGAGTGTTCTTTCGAATGGTTTCACTTGG
ATTGTGTGGGCTTGGTCGTGCCTCCGACGGGGAGTTGGTTGTGCCCGGAC
TGCTGTGTGGAAAAAGGCGTCATCTACCAAGGAACGGCAGTGGCGCTACC
ACCACCGCAGACGTCCAAGCCTCCGGTTAATGCTGTTTCTCCTATGGAGG
TGGAGCAGCAGGAGGAGCAGGGGAAGGAGCAGGCGCTGGAGCGAAGTGCG
AAGGAGGCTGCCGCCAGGGTGGTTGAAGAACAAGAAGGAGTGAAGGAAGG
AGGAGAAAAGTTGATGGAAGGGAAGGAGGCTGCACCACTAGACTCAGTAT
AGATGCTCAGCACCGCCCAACAACAAATCAACGACGTCCGCACCCGAACG
CTGCGTCTTGCCACGGCTGCCTATGATAAAGTGGACGATAGCATTCAGGC
CTTAGACTGGGACATTGGTATGCTGGAACCACAGATGGCAGCATCGGCTG
CAGAGGACAATAGTTTAGACCCTCAGATCCTGGCGATAAAGAGGAAGGAG
CAACGGAAGGCACAGCGGCAAGAAAAGCAACGCGCGAAGGAAATGGCCTC
CAAAAAGAAGAAAAAATTGGGGAAAGGTGGGAAAGACATGTCCGGCGACC
TGGGGCTAGTTCCTGCTGTCGGACAAGGACAAGGCGCTCATGGCGCAGAA
GAGGAAGTGGACCCGAATGAGCCGGTGTACTGTACATGCCAACGTGTCTC
GTATGGCCAAATGGTGGGGTGTGATAATGAGGAGTGTTCTTTCGAATGGT
TTCACTTGGATTGTGTGGGCTTGGTCGTGCCTCCGACGGGGAGTTGGTTG
TGCCCGGACTGCTGTGTGGAAAAAGGCGTCATCTACCAAGGAACGGCAGT
GGCGCTACCACCACCGCAGACGTCCAAGCCTCCGGTTAATGCTGTTTCTC
CTATGGAGGTGGAGCAGCAGGAGGAGCAGGGGAAGGAGCAGGCGCTGGAG
CGAAGTGCGAAGGAGGCTGCCGCCAGGGTGGTTGAAGAACAAGAAGGAGT
GAAGGAAGGAGGAGAAAAGTTGATGGAAGGGAAGGAGGCTGCACCACTAG
ACTCAGTATAGATGCTCAGCACCGCCCAACAACAAATCAACGACGTCCGC
ACCCGAACGCTGCGTCTTGCCACGGCTGCCTATGATAAAGTGGACGATAG
CATTCAGGCCTTAGACTGGGACATTGGTATGCTGGAACCACAGATGGCAG
CATCGGCTGCAGAGGACAATAGTTTAGACCCTCAGATCCTGGCGATAAAG
AGGAAGGAGCAACGGAAG back to top
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