jgi.p|Nanoce1779_2|630158, mRNA_4269 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|630158
Unique Name	mRNA_4269
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5370
Alignment location	scaffold_10:152317..157686 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	630244
Track	FilteredModels2
ProteinId	630158

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_10	supercontig	scaffold_10:152317..157686 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|630158	gene_4269	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|630158	mRNA_4269-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_4269	CDS_4269	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_10:152317..157686+
coding sequence from alignment at scaffold_10:152317..157686+

mRNA sequence

>mRNA_4269 ID=mRNA_4269|Name=jgi.p|Nanoce1779_2|630158|organism=Nannochloropsis oceanica|type=mRNA|length=5370bp
GGCGACGGGGCGGGCGGATTCAAATTTCGCATCCTCAAGTCATCGCAGAC
AGAAATTACATCACTTGCTTTATCCCTTCCTCTAGTATGCAGACAGTCAT
ACATTACCCCATTTTCCATCCACGTCCTTAGAAGCTATCTGCTTGTACCC
CTGAGGATCTGACTCCCCACCAAGACAACTCCTTCCCCTTTCTTGGCTTC
ATCACAGAACTTCTCTTCCTTAACACGACGCCCACACCACAAGATCTTAC
ACAGAGACTACCTCCCCTTTAGCCTGCCCGAAAAACCTTGGCGGCGTCCA
TCTGTTATGGCGCCACGCTCTGTCGTGCTGACCACGAGAGTGATCTTGGC
TGTCCTCTTTATGAACGCATTCATTGTGGGCACTCTTCACTATCGCCACA
CGGTCCAGCACGAGGACGGTACCCCGGTTCTTTACAATACCCTGTCCGCC
GACGAATTACCGCCTGGTGTTGCTAACTTGCGGGGAACGAGGACAAGCAC
ATTACAGGACGATTCAAAGCAGTTGCGGCAGAACGACTTCACGGCCGACC
GCGGCCCGCGCACACGACGCTATTTGGTCGTTATCCCCTTGATAGGCCTG
AAGGTTGATGATAGGGCCAGCCATGAGTCGGAGCGCCTGACGCTTAAAGC
CTGGGATGCCTTGGCCAACCATATATCGTCCCTAAGGGATGAAGAGCATG
AAATTGAGCTGCGGGTGGTGGGTATGGTGGAAAATACCGCGCATTGTGAC
TCACGCCTCTTTGGTCCGTCGGCGGACCTCTTGTCGTCGGGCGCCGCCTC
GTGCGTGACTTTGGATTTGTCCTGCGGACACCCCGACTTTGATGGTGTTC
TTACAATGGACTGCATCTTAAATATGTCACTTGAAATTGGCGAGGTCTGG
GAGGCAGACGTGTATATCCTGGCGAATGGTGATGTGGTCTTCACCCCTAC
TCTGACCGAGGCTATAGACTTTGCCTTGGACACGTTTGGGGACGGGAAAT
CATTAGCAACATCACCACCACATTTTCCAATTACAGCATCGTTGTCTATG
AGGGAGGTCGAGAAAAGCGTGACTGAGGCGAAAAAGAAAATCGAACCGCC
TCCGGTATCTTCAACCTCCTCCGCCACCTCTTCATTCTCCACTCTCTCGA
CATCTCTCCCAACACAGCCCTCCCACGGCTTTGTCATGGTCGGGCGCCGG
ATGGACTTGAGCGTCGCGCTCCCCAAAAATACCGACGATCCTCCTTTAAC
CGAAGATGACTTGCTGCACAGCGACATCAAAGTACGGCTGCATCCAGCTA
CGGGCATCGACTACTTCGCCTTCACCCCCAACATCATTCCCCGCACATTC
CCCCCCTACCTCGTTGGCCGCTGGCGGTGGGACAACGCCTTACTTATTCA
CTTCCTGTCATCAAATGCTGCGAGTATCGATGCCTCAGAGGTGGTGCACG
CGCTGCACATTGGCATGGGCTCCTTCGATTCTGCCTCTCACGCCGCGCGG
CCCGGAGGGCAGTACAACGATGATATTGCCACCAACATGACAGGGTCTAG
GCTTACTTTGGGACGGATCGATTTCACGAAGTATATTTTGAAGCAGCGAG
AGATGACGGAGGAGGAGAAGGAGGAGGCCAAGAGGCAGCAGCATCGGTTG
TCGTTGGAGGTGGAACGAAGGTCGCAGCCCTTGGGAGAGGCGCAGCTGGC
GGCGTTGAGGGTGACGGATAAAAGCAGTTTTGCGGATGACAATAGTGGTG
ACCAACAGCGGCAGCAGCAAACGAAGGTGAAAGGAGGCAAAACGGTCTTC
CTTCTTCCCGTCCAAGCAGGTGAGAAGGCCCTCGCCCTCGAGTGGGTGCG
CTGGGCACGAGGCATGAAGATAGACAATTATCTCCTCCTCGCAGCCGATA
GATCTGAGGCTTTGGCACTTGAGTGTATCCTTGCAACGAACACCACCAAT
ACCAGCAGCAGTAGCAGCACAGAAAGCAGAGGAGGAGAGGTGGTATGGAT
GGATCCAGGGAAGCTGAGATTGCGTGGATGGGATGGAAGCAAGGCCTACT
TTGAGCAGAAAACGTCGGGCCGAGCCTCGCCGGCAGTGCTGGCACTTGCA
ACGGGTCAATTGATTGAGCGACTGCTGCGATTGGATTTGGCCGTAGTGTT
GCTTCCGTCGCTCCTTCCCTCTACGTCTCTCATGTCCTCCTCGGTGCAGG
CGCTACTACGGAAGGAAAACGACGTATTTCAGAAGGATGGACGGGTAATG
ACCGCGTTGGTGGCATCCTTACTTTCTATTCGTGATGAGGAGGCATGCGA
TGTGACTTTGTGGGAGGAAGGACAGGTGAAGATAGACAAAATTAATGCAG
CACAGACAACGGCGCATGGGATACAGGAGACTGTATTTTCAGACGAGAAC
GAGCAACGGCCCCTTCCATTCGCGTATGCTCTTTTTCAGCCCACAAGCAC
GGTTTTGAAGGGATGGGAAGTGGTCTTGTCCTGTTTGGAGGAGGATGTCC
GGCACACGAAAAGCCAGCAGGGATTGTGCTTGACTAAAGTAATCTCTGCC
GCATGCCGTGAATCGATTCCGTCAGCCGCAGCCCCCTCATATAGGTGATG
GATGCAACCGTCGCGAAGGATCAGGCTAGCAGAATAAAGATAACAGCGGC
AGCAGCATCAGTAGCGAGGATAAGACTGCGTATAGTATACGGACAAATAG
CTCTCGAGAAAATATGGCGCCTTTATCTTTACCCAACCCTTGCATATTGT
ACGATGTTGATCGACCAGAACAGAAGACCATGCGATTAGGAAAGACTTCA
AATATAGATATTACTCGAGGAAAGCATTGTCTGCTGACCTTGAAAGAATC
TGTGTATTTTTGGAGTTGTGAACAGACATTATATCATAAGTAGATGTAAA
CGAAGAGGATACATATTTACTCAAGACGAGCAATCAATCCAAAAGATCAA
AGCAGACAAAGAAATGAAAGAAACGCATGCATACTTTTGGTGTGATTTTA
TATATTCAGACGTTCAGACCTTGTCCAACATGGACTCCACCACACTACAC
TATAACACAGGCACCGTCATAGTAATGGGGGCTTCTGTCTTACGCAGACT
GGTGCTGCTTTTACTGCCGCTGCATGGAGCAACTTTCTTCCTTTCCAGCA
GCAGCCAGTATCATCGTCGCTCACCACCAAGCCCGCAGCACCATCGACAC
TCTTATCCACTGCACGCCACTACCGACGAAATACTCACCGCCACCGCCCC
TAAGCCCACGCCTGACCTCTGCATCTTTGATGCTCCCAAGGCCGTTCGCC
TGGCCGCCTTTTCCTTTGCTACTTACGGAGATCCCACTGGCTCCCGATGG
CTGCGTCTGCCCGACGGCACTGACCTTGGCTTCCAATCTGATGACTTGGT
GCGCAACAACTTTAAAAGTTTGCTGTTGGTTCACATCCTGCAAGCCCGCA
ACCTGCCAGAAGAACGGGGCGGGCTTATTGAGAGGGCTCTCTCAGGCTTT
AGCTGCGACCCCTACGTCATCACGGCCGTCAACAATTCGTGGGGTGCAGA
TATCGCCATCACTAAGGCCAAGAGTGCTAATTCCAATCCCGATTTTTTCC
AGCGCTTTTTCTTGTACGTGGAAGATCCCAACACAACGGATCTAGAGCTA
ACTGTCAAGGATAAGAACCTGCTGAAAGGCGATGATGTTATTGGGCACTG
TCTGGTGCCCTTGACGCAGCTGCTCGACGGGTCAAAAGGAGAGGGCGCAC
CTGGTCAAGAAGGCGTGATGGAGTGGGCGGGGACCTTGCAAATCGAAAGC
GTGCACAAGGATTTTAAGGATGCTGGCACCATTGACGTAGAGCTGCAGCT
GGTGCCCTTGAATGGAGAGGCCGTGAACAAGGTCGAATACGACTCCAATG
ACCAGGACGTCGCCGAGAGCGACGCCGATGGCAGTGGCAGCAAGCATGGT
AAATTCAGTGCACGGGGTCCGAAAAGTGTGCTTGAAGGCATTGATTGGAA
TGAGCTGGGCGCCCGTGTCGGTGGAGTGGCCAGGGGGCTGGGCCGCTACC
AGTTTGCCTGCTTTCTGACCAACGAGGAGACCGATACGCAGGGGGGAATC
TGGTTTGATGCCAAAGCCAAGGAGATCATTGTCTCCTTCCGAGGCACGCA
GATGGAATGGAAGGATTTGCTGACTGACATGGCGATCTATCAAGAAGGGT
TGGATGGGCCTGAGGACCCGCGGTTGGTGCACGCGGGCTTTCGACGTGCT
TTTCGTTCTATTCAAGGCGGGGTCCTACAGGCCTTGAATTTTATAGCTTC
CAATTTGGTGGAGGATGGATGGTCTATAGACGTGTGTGGGCACTCCTTAG
GGGGGGCACTGGCGTGCTTGATGGCCCACGAGATCGATCGGCGCATGCCT
GCCTTGGTAGAGGAAGGGAGGCTGAATGTTTTTTCCTTTGGGGCGCCAAG
GGTGGGTAACACGGCGTTTTGTGAGGACTATGACAAGCGGCTTAAAAACC
AGAGCTTTCGAATAGTGAATGGGTTGGACGTTGTTGCGCGAATGCCACGA
GGGTCGGGTGAATCTTCCCTATTGATGGAATACAGTCATTGCGGGCGCAC
GGTACTACTGACCGAGACAGAAGACGGTCGATTTAGTGTATGGGTGGAGG
GCGAAAGTGAAGGCACTTGCCCACTCAAAGAAGGAGAGGCATTTACGAGC
ACGACGCCTACGAGTCAATCCATGGCGGAGATTATCAAGAAGGCCGCAAT
AGAAGCGATGGAGAGAGGGAAGGGAGGTCTTGAGTTTGAAACTCCATTTA
GCAAGGCAACCTTTGCGAACGGTACAGCTGCCTCAGTGCAAGAAATGCTG
CGGGCCGCCGGAAACTTTACAAACCTTCAAGCTATGCTCTCCTCTACGTC
CTCCATCGACTACTTCTCCTCTTTCACCTCCATTCCTTCCTCGCCTTCTC
TGGGGCCATTTGGACAGCTGAGCTTGCAAACGGATTTGCAGCAAATCGCC
AATGCAGTGTTTGGAAGCGCGATGAACTCGACAGCTACGATTGGCAAGAG
CTTGGGGTTGAATGAGACGTTTGTAGATAGTGAGTTGAGTTTAATTCGAG
GGTTGGTGTACGGAGATGCATTAGCCCACCATATGGAGCCGCTTTATTAT
GTTGCGCTTGAGAAAGCGTTTGGGATTGCGATGGAGGAAGGGGTGGATGA
CAAGAAAGGGGAAGAGAAGGGGGATGGTGCAACGAAGAAGTACGGATAAT
GAGTCACACGAAAAGGCAAGGAAACGGTCAGTACACTAGCTTACTTGGCA
AGTAAAATGTATGAAATTATGTGAGCATGCATTGAAGTTTAAAAACTGGT
TTGCATAGAAATACATATTT

protein sequence of jgi.p|Nanoce1779_2|630158

>mRNA_4269-protein ID=mRNA_4269-protein|Name=jgi.p|Nanoce1779_2|630158|organism=Nannochloropsis oceanica|type=polypeptide|length=764bp
MAPRSVVLTTRVILAVLFMNAFIVGTLHYRHTVQHEDGTPVLYNTLSADE
LPPGVANLRGTRTSTLQDDSKQLRQNDFTADRGPRTRRYLVVIPLIGLKV
DDRASHESERLTLKAWDALANHISSLRDEEHEIELRVVGMVENTAHCDSR
LFGPSADLLSSGAASCVTLDLSCGHPDFDGVLTMDCILNMSLEIGEVWEA
DVYILANGDVVFTPTLTEAIDFALDTFGDGKSLATSPPHFPITASLSMRE
VEKSVTEAKKKIEPPPVSSTSSATSSFSTLSTSLPTQPSHGFVMVGRRMD
LSVALPKNTDDPPLTEDDLLHSDIKVRLHPATGIDYFAFTPNIIPRTFPP
YLVGRWRWDNALLIHFLSSNAASIDASEVVHALHIGMGSFDSASHAARPG
GQYNDDIATNMTGSRLTLGRIDFTKYILKQREMTEEEKEEAKRQQHRLSL
EVERRSQPLGEAQLAALRVTDKSSFADDNSGDQQRQQQTKVKGGKTVFLL
PVQAGEKALALEWVRWARGMKIDNYLLLAADRSEALALECILATNTTNTS
SSSSTESRGGEVVWMDPGKLRLRGWDGSKAYFEQKTSGRASPAVLALATG
QLIERLLRLDLAVVLLPSLLPSTSLMSSSVQALLRKENDVFQKDGRVMTA
LVASLLSIRDEEACDVTLWEEGQVKIDKINAAQTTAHGIQETVFSDENEQ
RPLPFAYALFQPTSTVLKGWEVVLSCLEEDVRHTKSQQGLCLTKVISAAC
RESIPSAAAPSYR*

mRNA from alignment at scaffold_10:152317..157686+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4269 ID=mRNA_4269|Name=jgi.p|Nanoce1779_2|630158|organism=Nannochloropsis oceanica|type=mRNA|length=5370bp|location=Sequence derived from alignment at scaffold_10:152317..157686+ (Nannochloropsis oceanica)
GGCGACGGGGCGGGCGGATTCAAATTTCGCATCCTCAAGTCATCGCAGAC
AGAAATTACATCACTTGCTTTATCCCTTCCTCTAGTATGCAGACAGTCAT
ACATTACCCCATTTTCCATCCACGTCCTTAGAAGCTATCTGCTTGTACCC
CTGAGGATCTGACTCCCCACCAAGACAACTCCTTCCCCTTTCTTGGCTTC
ATCACAGAACTTCTCTTCCTTAACACGACGCCCACACCACAAGATCTTAC
ACAGAGACTACCTCCCCTTTAGCCTGCCCGAAAAACCTTGGCGGCGTCCA
TCTGTTATGGCGCCACGCTCTGTCGTGCTGACCACGAGAGTGATCTTGGC
TGTCCTCTTTATGAACGCATTCATTGTGGGCACTCTTCACTATCGCCACA
CGGTCCAGCACGAGGACGGTACCCCGGTTCTTTACAATACCCTGTCCGCC
GACGAATTACCGCCTGGTGTTGCTAACTTGCGGGGAACGAGGACAAGCAC
ATTACAGGACGATTCAAAGCAGTTGCGGCAGAACGACTTCACGGCCGACC
GCGGCCCGCGCACACGACGCTATTTGGTCGTTATCCCCTTGATAGGCCTG
AAGGTTGATGATAGGGCCAGCCATGAGTCGGAGCGCCTGACGCTTAAAGC
CTGGGATGCCTTGGCCAACCATATATCGTCCCTAAGGGATGAAGAGCATG
AAATTGAGCTGCGGGTGGTGGGTATGGTGGAAAATACCGCGCATTGTGAC
TCACGCCTCTTTGGTCCGTCGGCGGACCTCTTGTCGTCGGGCGCCGCCTC
GTGCGTGACTTTGGATTTGTCCTGCGGACACCCCGACTTTGATGGTGTTC
TTACAATGGACTGCATCTTAAATATGTCACTTGAAATTGGCGAGGTCTGG
GAGGCAGACGTGTATATCCTGGCGAATGGTGATGTGGTCTTCACCCCTAC
TCTGACCGAGGCTATAGACTTTGCCTTGGACACGTTTGGGGACGGGAAAT
CATTAGCAACATCACCACCACATTTTCCAATTACAGCATCGTTGTCTATG
AGGGAGGTCGAGAAAAGCGTGACTGAGGCGAAAAAGAAAATCGAACCGCC
TCCGGTATCTTCAACCTCCTCCGCCACCTCTTCATTCTCCACTCTCTCGA
CATCTCTCCCAACACAGCCCTCCCACGGCTTTGTCATGGTCGGGCGCCGG
ATGGACTTGAGCGTCGCGCTCCCCAAAAATACCGACGATCCTCCTTTAAC
CGAAGATGACTTGCTGCACAGCGACATCAAAGTACGGCTGCATCCAGCTA
CGGGCATCGACTACTTCGCCTTCACCCCCAACATCATTCCCCGCACATTC
CCCCCCTACCTCGTTGGCCGCTGGCGGTGGGACAACGCCTTACTTATTCA
CTTCCTGTCATCAAATGCTGCGAGTATCGATGCCTCAGAGGTGGTGCACG
CGCTGCACATTGGCATGGGCTCCTTCGATTCTGCCTCTCACGCCGCGCGG
CCCGGAGGGCAGTACAACGATGATATTGCCACCAACATGACAGGGTCTAG
GCTTACTTTGGGACGGATCGATTTCACGAAGTATATTTTGAAGCAGCGAG
AGATGACGGAGGAGGAGAAGGAGGAGGCCAAGAGGCAGCAGCATCGGTTG
TCGTTGGAGGTGGAACGAAGGTCGCAGCCCTTGGGAGAGGCGCAGCTGGC
GGCGTTGAGGGTGACGGATAAAAGCAGTTTTGCGGATGACAATAGTGGTG
ACCAACAGCGGCAGCAGCAAACGAAGGTGAAAGGAGGCAAAACGGTCTTC
CTTCTTCCCGTCCAAGCAGGTGAGAAGGCCCTCGCCCTCGAGTGGGTGCG
CTGGGCACGAGGCATGAAGATAGACAATTATCTCCTCCTCGCAGCCGATA
GATCTGAGGCTTTGGCACTTGAGTGTATCCTTGCAACGAACACCACCAAT
ACCAGCAGCAGTAGCAGCACAGAAAGCAGAGGAGGAGAGGTGGTATGGAT
GGATCCAGGGAAGCTGAGATTGCGTGGATGGGATGGAAGCAAGGCCTACT
TTGAGCAGAAAACGTCGGGCCGAGCCTCGCCGGCAGTGCTGGCACTTGCA
ACGGGTCAATTGATTGAGCGACTGCTGCGATTGGATTTGGCCGTAGTGTT
GCTTCCGTCGCTCCTTCCCTCTACGTCTCTCATGTCCTCCTCGGTGCAGG
CGCTACTACGGAAGGAAAACGACGTATTTCAGAAGGATGGACGGGTAATG
ACCGCGTTGGTGGCATCCTTACTTTCTATTCGTGATGAGGAGGCATGCGA
TGTGACTTTGTGGGAGGAAGGACAGGTGAAGATAGACAAAATTAATGCAG
CACAGACAACGGCGCATGGGATACAGGAGACTGTATTTTCAGACGAGAAC
GAGCAACGGCCCCTTCCATTCGCGTATGCTCTTTTTCAGCCCACAAGCAC
GGTTTTGAAGGGATGGGAAGTGGTCTTGTCCTGTTTGGAGGAGGATGTCC
GGCACACGAAAAGCCAGCAGGGATTGTGCTTGACTAAAGTAATCTCTGCC
GCATGCCGTGAATCGATTCCGTCAGCCGCAGCCCCCTCATATAGGTGATG
GATGCAACCGTCGCGAAGGATCAGGCTAGCAGAATAAAGATAACAGCGGC
AGCAGCATCAGTAGCGAGGATAAGACTGCGTATAGTATACGGACAAATAG
CTCTCGAGAAAATATGGCGCCTTTATCTTTACCCAACCCTTGCATATTGT
ACGATGTTGATCGACCAGAACAGAAGACCATGCGATTAGGAAAGACTTCA
AATATAGATATTACTCGAGGAAAGCATTGTCTGCTGACCTTGAAAGAATC
TGTGTATTTTTGGAGTTGTGAACAGACATTATATCATAAGTAGATGTAAA
CGAAGAGGATACATATTTACTCAAGACGAGCAATCAATCCAAAAGATCAA
AGCAGACAAAGAAATGAAAGAAACGCATGCATACTTTTGGTGTGATTTTA
TATATTCAGACGTTCAGACCTTGTCCAACATGGACTCCACCACACTACAC
TATAACACAGGCACCGTCATAGTAATGGGGGCTTCTGTCTTACGCAGACT
GGTGCTGCTTTTACTGCCGCTGCATGGAGCAACTTTCTTCCTTTCCAGCA
GCAGCCAGTATCATCGTCGCTCACCACCAAGCCCGCAGCACCATCGACAC
TCTTATCCACTGCACGCCACTACCGACGAAATACTCACCGCCACCGCCCC
TAAGCCCACGCCTGACCTCTGCATCTTTGATGCTCCCAAGGCCGTTCGCC
TGGCCGCCTTTTCCTTTGCTACTTACGGAGATCCCACTGGCTCCCGATGG
CTGCGTCTGCCCGACGGCACTGACCTTGGCTTCCAATCTGATGACTTGGT
GCGCAACAACTTTAAAAGTTTGCTGTTGGTTCACATCCTGCAAGCCCGCA
ACCTGCCAGAAGAACGGGGCGGGCTTATTGAGAGGGCTCTCTCAGGCTTT
AGCTGCGACCCCTACGTCATCACGGCCGTCAACAATTCGTGGGGTGCAGA
TATCGCCATCACTAAGGCCAAGAGTGCTAATTCCAATCCCGATTTTTTCC
AGCGCTTTTTCTTGTACGTGGAAGATCCCAACACAACGGATCTAGAGCTA
ACTGTCAAGGATAAGAACCTGCTGAAAGGCGATGATGTTATTGGGCACTG
TCTGGTGCCCTTGACGCAGCTGCTCGACGGGTCAAAAGGAGAGGGCGCAC
CTGGTCAAGAAGGCGTGATGGAGTGGGCGGGGACCTTGCAAATCGAAAGC
GTGCACAAGGATTTTAAGGATGCTGGCACCATTGACGTAGAGCTGCAGCT
GGTGCCCTTGAATGGAGAGGCCGTGAACAAGGTCGAATACGACTCCAATG
ACCAGGACGTCGCCGAGAGCGACGCCGATGGCAGTGGCAGCAAGCATGGT
AAATTCAGTGCACGGGGTCCGAAAAGTGTGCTTGAAGGCATTGATTGGAA
TGAGCTGGGCGCCCGTGTCGGTGGAGTGGCCAGGGGGCTGGGCCGCTACC
AGTTTGCCTGCTTTCTGACCAACGAGGAGACCGATACGCAGGGGGGAATC
TGGTTTGATGCCAAAGCCAAGGAGATCATTGTCTCCTTCCGAGGCACGCA
GATGGAATGGAAGGATTTGCTGACTGACATGGCGATCTATCAAGAAGGGT
TGGATGGGCCTGAGGACCCGCGGTTGGTGCACGCGGGCTTTCGACGTGCT
TTTCGTTCTATTCAAGGCGGGGTCCTACAGGCCTTGAATTTTATAGCTTC
CAATTTGGTGGAGGATGGATGGTCTATAGACGTGTGTGGGCACTCCTTAG
GGGGGGCACTGGCGTGCTTGATGGCCCACGAGATCGATCGGCGCATGCCT
GCCTTGGTAGAGGAAGGGAGGCTGAATGTTTTTTCCTTTGGGGCGCCAAG
GGTGGGTAACACGGCGTTTTGTGAGGACTATGACAAGCGGCTTAAAAACC
AGAGCTTTCGAATAGTGAATGGGTTGGACGTTGTTGCGCGAATGCCACGA
GGGTCGGGTGAATCTTCCCTATTGATGGAATACAGTCATTGCGGGCGCAC
GGTACTACTGACCGAGACAGAAGACGGTCGATTTAGTGTATGGGTGGAGG
GCGAAAGTGAAGGCACTTGCCCACTCAAAGAAGGAGAGGCATTTACGAGC
ACGACGCCTACGAGTCAATCCATGGCGGAGATTATCAAGAAGGCCGCAAT
AGAAGCGATGGAGAGAGGGAAGGGAGGTCTTGAGTTTGAAACTCCATTTA
GCAAGGCAACCTTTGCGAACGGTACAGCTGCCTCAGTGCAAGAAATGCTG
CGGGCCGCCGGAAACTTTACAAACCTTCAAGCTATGCTCTCCTCTACGTC
CTCCATCGACTACTTCTCCTCTTTCACCTCCATTCCTTCCTCGCCTTCTC
TGGGGCCATTTGGACAGCTGAGCTTGCAAACGGATTTGCAGCAAATCGCC
AATGCAGTGTTTGGAAGCGCGATGAACTCGACAGCTACGATTGGCAAGAG
CTTGGGGTTGAATGAGACGTTTGTAGATAGTGAGTTGAGTTTAATTCGAG
GGTTGGTGTACGGAGATGCATTAGCCCACCATATGGAGCCGCTTTATTAT
GTTGCGCTTGAGAAAGCGTTTGGGATTGCGATGGAGGAAGGGGTGGATGA
CAAGAAAGGGGAAGAGAAGGGGGATGGTGCAACGAAGAAGTACGGATAAT
GAGTCACACGAAAAGGCAAGGAAACGGTCAGTACACTAGCTTACTTGGCA
AGTAAAATGTATGAAATTATGTGAGCATGCATTGAAGTTTAAAAACTGGT
TTGCATAGAAATACATATTT

Coding sequence (CDS) from alignment at scaffold_10:152317..157686+

>mRNA_4269 ID=mRNA_4269|Name=jgi.p|Nanoce1779_2|630158|organism=Nannochloropsis oceanica|type=CDS|length=2292bp|location=Sequence derived from alignment at scaffold_10:152317..157686+ (Nannochloropsis oceanica)
ATGGCGCCACGCTCTGTCGTGCTGACCACGAGAGTGATCTTGGCTGTCCT
CTTTATGAACGCATTCATTGTGGGCACTCTTCACTATCGCCACACGGTCC
AGCACGAGGACGGTACCCCGGTTCTTTACAATACCCTGTCCGCCGACGAA
TTACCGCCTGGTGTTGCTAACTTGCGGGGAACGAGGACAAGCACATTACA
GGACGATTCAAAGCAGTTGCGGCAGAACGACTTCACGGCCGACCGCGGCC
CGCGCACACGACGCTATTTGGTCGTTATCCCCTTGATAGGCCTGAAGGTT
GATGATAGGGCCAGCCATGAGTCGGAGCGCCTGACGCTTAAAGCCTGGGA
TGCCTTGGCCAACCATATATCGTCCCTAAGGGATGAAGAGCATGAAATTG
AGCTGCGGGTGGTGGGTATGGTGGAAAATACCGCGCATTGTGACTCACGC
CTCTTTGGTCCGTCGGCGGACCTCTTGTCGTCGGGCGCCGCCTCGTGCGT
GACTTTGGATTTGTCCTGCGGACACCCCGACTTTGATGGTGTTCTTACAA
TGGACTGCATCTTAAATATGTCACTTGAAATTGGCGAGGTCTGGGAGGCA
GACGTGTATATCCTGGCGAATGGTGATGTGGTCTTCACCCCTACTCTGAC
CGAGGCTATAGACTTTGCCTTGGACACGTTTGGGGACGGGAAATCATTAG
CAACATCACCACCACATTTTCCAATTACAGCATCGTTGTCTATGAGGGAG
GTCGAGAAAAGCGTGACTGAGGCGAAAAAGAAAATCGAACCGCCTCCGGT
ATCTTCAACCTCCTCCGCCACCTCTTCATTCTCCACTCTCTCGACATCTC
TCCCAACACAGCCCTCCCACGGCTTTGTCATGGTCGGGCGCCGGATGGAC
TTGAGCGTCGCGCTCCCCAAAAATACCGACGATCCTCCTTTAACCGAAGA
TGACTTGCTGCACAGCGACATCAAAGTACGGCTGCATCCAGCTACGGGCA
TCGACTACTTCGCCTTCACCCCCAACATCATTCCCCGCACATTCCCCCCC
TACCTCGTTGGCCGCTGGCGGTGGGACAACGCCTTACTTATTCACTTCCT
GTCATCAAATGCTGCGAGTATCGATGCCTCAGAGGTGGTGCACGCGCTGC
ACATTGGCATGGGCTCCTTCGATTCTGCCTCTCACGCCGCGCGGCCCGGA
GGGCAGTACAACGATGATATTGCCACCAACATGACAGGGTCTAGGCTTAC
TTTGGGACGGATCGATTTCACGAAGTATATTTTGAAGCAGCGAGAGATGA
CGGAGGAGGAGAAGGAGGAGGCCAAGAGGCAGCAGCATCGGTTGTCGTTG
GAGGTGGAACGAAGGTCGCAGCCCTTGGGAGAGGCGCAGCTGGCGGCGTT
GAGGGTGACGGATAAAAGCAGTTTTGCGGATGACAATAGTGGTGACCAAC
AGCGGCAGCAGCAAACGAAGGTGAAAGGAGGCAAAACGGTCTTCCTTCTT
CCCGTCCAAGCAGGTGAGAAGGCCCTCGCCCTCGAGTGGGTGCGCTGGGC
ACGAGGCATGAAGATAGACAATTATCTCCTCCTCGCAGCCGATAGATCTG
AGGCTTTGGCACTTGAGTGTATCCTTGCAACGAACACCACCAATACCAGC
AGCAGTAGCAGCACAGAAAGCAGAGGAGGAGAGGTGGTATGGATGGATCC
AGGGAAGCTGAGATTGCGTGGATGGGATGGAAGCAAGGCCTACTTTGAGC
AGAAAACGTCGGGCCGAGCCTCGCCGGCAGTGCTGGCACTTGCAACGGGT
CAATTGATTGAGCGACTGCTGCGATTGGATTTGGCCGTAGTGTTGCTTCC
GTCGCTCCTTCCCTCTACGTCTCTCATGTCCTCCTCGGTGCAGGCGCTAC
TACGGAAGGAAAACGACGTATTTCAGAAGGATGGACGGGTAATGACCGCG
TTGGTGGCATCCTTACTTTCTATTCGTGATGAGGAGGCATGCGATGTGAC
TTTGTGGGAGGAAGGACAGGTGAAGATAGACAAAATTAATGCAGCACAGA
CAACGGCGCATGGGATACAGGAGACTGTATTTTCAGACGAGAACGAGCAA
CGGCCCCTTCCATTCGCGTATGCTCTTTTTCAGCCCACAAGCACGGTTTT
GAAGGGATGGGAAGTGGTCTTGTCCTGTTTGGAGGAGGATGTCCGGCACA
CGAAAAGCCAGCAGGGATTGTGCTTGACTAAAGTAATCTCTGCCGCATGC
CGTGAATCGATTCCGTCAGCCGCAGCCCCCTCATATAGGTGA

Synonyms

Publications