Properties
| Property Name | Value |
|---|
| TranscriptId | 588600 |
| Track | FilteredModels2 |
| ProteinId | 588514 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_10 | supercontig | scaffold_10:119324..120635 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4255 ID=mRNA_4255|Name=jgi.p|Nanoce1779_2|588514|organism=Nannochloropsis oceanica|type=mRNA|length=1080bp
ACAGCCTGTTCCTTCCCTTGGTCTGCCACGCTATTCCTGCATCACCACAG
TGAAGACAAGCCTCCTCTATATCCTGTGACGTGAACCCTCTTCCATGACC
ATGGGTGGTCGCATTTCCTCCCTGGTCTTCCAACCTCCATCCAAGCCTTC
CCACATCAACTCCACCAAGTACATTGTGTTGCCCACCAGCAAGGGGAACA
TGATCCCGGCATTTTATTTCGATCGGTCCGCACATTTGACTGTATTAGTA
TCGCATGGGAATGCTGAGGACTTGGGCATGATCTACGACCAATTTTTCGA
CTTTTCCCGTCAACTTAACGTGAACGTTATGGCTTTTGAATACTCGGGCT
ACGGCAAAGCCACCGGTTCCCCCTCCGAAGCGAATTGCTACGCCGACATC
GACGCCGCCTTTAAGTACCTCATTGAAACAAAAAAAGTCGTCCCCTCCCG
CCTCATCCTCTTCGGCCGTTCTATCGGGAGTGGGCCAACGTGCTACTTGG
CGGAACGGTTGTCGGAAGGGGGGACGCCGGTAGGGGGAGTAATACTGCAA
AGTCCTGTGTTGTCAATCTTTAGGGTTGTATTTCCTAATTTGCGGCATAC
GTGGTGGGGGGACATTTTCCCCAATGTGGACAGGATGAAGCGGATTGAAA
GCCCCGTGTTTGTGATGCACGGAACCAGGGACGAGATCATCCCGCTTGGG
CATGGCCAGGAGTTGTTCTTGGCGACCCCTGTCAAGTGGAGGGCGAGGCC
ACTGTGGGTGGAGGGAGGGGGCCATAACGACTTGGAGGGGTTGTTGAGGC
ATGAGGGGACGTACTTTTCGTGTGTATTGGAGTTTTTCCGGGAGTGGTGT
TTCACCGAGCGCGGGGTTTATTAGCATAGGTGGTGCGAAAGAGGGAAGAG
GCACGGGGGAAAGAGGGAAGAGAGGGAGGAATCGTCCTTGTGGTGATGGA
GGAAATGAGTGGATGTATACAAGGAGTTTGGTCGAAAGAGACGGGAAGCA
CCTCCTGGGGAAGTAACTGTTGTAGCAGCAGTAACATGGAAAGACCTCGG
AAGAATAAAAGTACAGTTGATAAATAAGAA back to topprotein sequence of jgi.p|Nanoce1779_2|588514 >mRNA_4255-protein ID=mRNA_4255-protein|Name=jgi.p|Nanoce1779_2|588514|organism=Nannochloropsis oceanica|type=polypeptide|length=260bp
MTMGGRISSLVFQPPSKPSHINSTKYIVLPTSKGNMIPAFYFDRSAHLTV
LVSHGNAEDLGMIYDQFFDFSRQLNVNVMAFEYSGYGKATGSPSEANCYA
DIDAAFKYLIETKKVVPSRLILFGRSIGSGPTCYLAERLSEGGTPVGGVI
LQSPVLSIFRVVFPNLRHTWWGDIFPNVDRMKRIESPVFVMHGTRDEIIP
LGHGQELFLATPVKWRARPLWVEGGGHNDLEGLLRHEGTYFSCVLEFFRE
WCFTERGVY* back to topmRNA from alignment at scaffold_10:119324..120635+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4255 ID=mRNA_4255|Name=jgi.p|Nanoce1779_2|588514|organism=Nannochloropsis oceanica|type=mRNA|length=1312bp|location=Sequence derived from alignment at scaffold_10:119324..120635+ (Nannochloropsis oceanica)
ACAGCCTGTTCCTTCCCTTGGTCTGCCACGCTATTCCTGCATCACCACAG
TGAAGACAAGCCTCCTCTATATCCTGTGACGTGAACCCTCTTCCATGACC
ATGGGTGGTCGCATTTCCTCCCTGGTCTTCCAACCTCCATCCAAGCCTTC
CCACATCAACTCCACCAAGTACATTGTGTTGCCCACCAGCAAGGGGAACA
TGATCCCGGCATTTTATTTCGATCGGTCCGCACATTTGACTGTATTAGTA
TCGCATGGGAATGCTGAGGACTTGGGTAAGTGTTGCGAATGCTGTAGAGG
ACGAGGGACGGGAGGCAGAGAGGGAGAGAGGGCGGAACGAACAAAAGAAG
TGGGCCTCTACGCTCATCTGTGCCACTTGTCTAAATTTCCTTTTCATGCA
TGGACAATTTCACGAAGTAGAAAAATCAAAAAATTGAATAGACATAAATG
TTTGGGTATAAATAAATAACCTCGAAATGATCAACAAACATCTACACAAA
CAACCAGGCATGATCTACGACCAATTTTTCGACTTTTCCCGTCAACTTAA
CGTGAACGTTATGGCTTTTGAATACTCGGGCTACGGCAAAGCCACCGGTT
CCCCCTCCGAAGCGAATTGCTACGCCGACATCGACGCCGCCTTTAAGTAC
CTCATTGAAACAAAAAAAGTCGTCCCCTCCCGCCTCATCCTCTTCGGCCG
TTCTATCGGGAGTGGGCCAACGTGCTACTTGGCGGAACGGTTGTCGGAAG
GGGGGACGCCGGTAGGGGGAGTAATACTGCAAAGTCCTGTGTTGTCAATC
TTTAGGGTTGTATTTCCTAATTTGCGGCATACGTGGTGGGGGGACATTTT
CCCCAATGTGGACAGGATGAAGCGGATTGAAAGCCCCGTGTTTGTGATGC
ACGGAACCAGGGACGAGATCATCCCGCTTGGGCATGGCCAGGAGTTGTTC
TTGGCGACCCCTGTCAAGTGGAGGGCGAGGCCACTGTGGGTGGAGGGAGG
GGGCCATAACGACTTGGAGGGGTTGTTGAGGCATGAGGGGACGTACTTTT
CGTGTGTATTGGAGTTTTTCCGGGAGTGGTGTTTCACCGAGCGCGGGGTT
TATTAGCATAGGTGGTGCGAAAGAGGGAAGAGGCACGGGGGAAAGAGGGA
AGAGAGGGAGGAATCGTCCTTGTGGTGATGGAGGAAATGAGTGGATGTAT
ACAAGGAGTTTGGTCGAAAGAGACGGGAAGCACCTCCTGGGGAAGTAACT
GTTGTAGCAGCAGTAACATGGAAAGACCTCGGAAGAATAAAAGTACAGTT
GATAAATAAGAA back to topCoding sequence (CDS) from alignment at scaffold_10:119324..120635+ >mRNA_4255 ID=mRNA_4255|Name=jgi.p|Nanoce1779_2|588514|organism=Nannochloropsis oceanica|type=CDS|length=1560bp|location=Sequence derived from alignment at scaffold_10:119324..120635+ (Nannochloropsis oceanica)
ATGACCATGGGTGGTCGCATTTCCTCCCTGGTCTTCCAACCTCCATCCAA
GCCTTCCCACATCAACTCCACCAAGTACATTGTGTTGCCCACCAGCAAGG
GGAACATGATCCCGGCATTTTATTTCGATCGGTCCGCACATTTGACTGTA
TTAGTATCGCATGGGAATGCTGAGGACTTGGGCATGATCTACGACCAATT
TTTCGACTTTTCCCGTCAACTTAACGTGAACGTTATGGCTTTTGAATACT
CGGGCTACGGCAAAGCCACCGGTTCCCCCTCCGAAGCGAATTGCTACGCC
GACATCGACGCCGCCTTTAAGTACCTCATTGAAACAAAAAAAGTCGTCCC
CTCCCGCCTCATCCTCTTCGGCCGTTCTATCGGGAGTGGGCCAACGTGCT
ACTTGGCGGAACGGTTGTCGGAAGGGGGGACGCCGGTAGGGGGAGTAATA
CTGCAAAGTCCTGTGTTGTCAATCTTTAGGGTTGTATTTCCTAATTTGCG
GCATACGTGGTGGGGGGACATTTTCCCCAATGTGGACAGGATGAAGCGGA
TTGAAAGCCCCGTGTTTGTGATGCACGGAACCAGGGACGAGATCATCCCG
CTTGGGCATGGCCAGGAGTTGTTCTTGGCGACCCCTGTCAAGTGGAGGGC
GAGGCCACTGTGGGTGGAGGGAGGGGGCCATAACGACTTGGAGGGGTTGT
TGAGGCATGAGGGGACGTACTTTTCGTGTGTATTGGAGTTTTTCCGGGAG
TGGTGTTTCACCGAGCGCGGGGTTTATTAGATGACCATGGGTGGTCGCAT
TTCCTCCCTGGTCTTCCAACCTCCATCCAAGCCTTCCCACATCAACTCCA
CCAAGTACATTGTGTTGCCCACCAGCAAGGGGAACATGATCCCGGCATTT
TATTTCGATCGGTCCGCACATTTGACTGTATTAGTATCGCATGGGAATGC
TGAGGACTTGGGCATGATCTACGACCAATTTTTCGACTTTTCCCGTCAAC
TTAACGTGAACGTTATGGCTTTTGAATACTCGGGCTACGGCAAAGCCACC
GGTTCCCCCTCCGAAGCGAATTGCTACGCCGACATCGACGCCGCCTTTAA
GTACCTCATTGAAACAAAAAAAGTCGTCCCCTCCCGCCTCATCCTCTTCG
GCCGTTCTATCGGGAGTGGGCCAACGTGCTACTTGGCGGAACGGTTGTCG
GAAGGGGGGACGCCGGTAGGGGGAGTAATACTGCAAAGTCCTGTGTTGTC
AATCTTTAGGGTTGTATTTCCTAATTTGCGGCATACGTGGTGGGGGGACA
TTTTCCCCAATGTGGACAGGATGAAGCGGATTGAAAGCCCCGTGTTTGTG
ATGCACGGAACCAGGGACGAGATCATCCCGCTTGGGCATGGCCAGGAGTT
GTTCTTGGCGACCCCTGTCAAGTGGAGGGCGAGGCCACTGTGGGTGGAGG
GAGGGGGCCATAACGACTTGGAGGGGTTGTTGAGGCATGAGGGGACGTAC
TTTTCGTGTGTATTGGAGTTTTTCCGGGAGTGGTGTTTCACCGAGCGCGG
GGTTTATTAG back to top
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