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Properties
| Property Name | Value |
|---|
| TranscriptId | 427024 |
| Track | FilteredModels2 |
| ProteinId | 426938 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:1079073..1080956 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4187 ID=mRNA_4187|Name=jgi.p|Nanoce1779_2|426938|organism=Nannochloropsis oceanica|type=mRNA|length=1253bp
GCCGGTTAAAACAGAACAAGGAGATTTGACGGTCAACCGAGGCGAGGGCG
AGGGCGAGGGCGGGATGGAATGGGACGGACGATAAGAAAGAAATCAGGAG
CTGCTGATTCATTCACATCTTCACATCCCCCCAAATCCCAAATCTCAAAT
CCCCTTATATCCCGAATCCCGATTCCCGAACCCCAAATCCGAATTCCCCT
TCTTTTTCTATTTCCTCCGTCCCCCTTTATGACAGGGGAAATGGCGCGAG
ACCTGCGACCACCTCCAAGCCGCCGTCAAGATCTCTCCCCTCGTGCCCGA
GGTGTGGTTCATCTTGGGCATGGCCTACATGGCTCAGGAAGAGTGGAAGG
AGGCCCTGCAGGCCTTCACCCGCGTAGTCCAACAAGAGCCGGACGACGGG
CGCGCCTGGGGAAACCTTGCCGCCTGTCAAATGAAGCTTAACGATTACAC
TCACGCCTTGATCGCCTCCAAAGAAGCCGTGCGTCACATGCGGGACAATG
TCGAGATGTGGGAGAACTACCTGACCTGCGCTGCGCGCGTCGGGAGAAGC
ATGGATGTCCTCTACGCATTTCACCGGCTTCTCGATTTGAGACAGGTCCA
GTCGGGGAGTGGGAAGACAGGCAATGGTTCCCTCTGGACGCCTGATCTGA
GCGTGCTTACCCTCCTCGTCCGTCAAGCCGCCCAACTCGCACACAAAATC
GACAAGACCGACTACGAAGTCACAGCCTCCGCGGCCCTGAGCAAACAGGT
CGGTGAGCTTTTGGGTCGCGTCACATCCATCATCACCACCAACCCCGACC
TGTGGTTGCTCTATGCCCGCTTCAACGAGGAGGTCTCCCTCCCCCCCGCC
CTCGCCGCTGCCCTTGACCACAAGACCCGCGCGTGTCGGGCGTTGCTGAG
TAAGAACGGTTGGGAGAAGAGGAGGAGGGAGGAGGGAGGGAGGGAGGGAG
GGAGGGTGGTGGAGGCGTTGGAAAGTCTTGTGCACTCGCACCTGCAGCAG
CCGTCGGTTGCGGGCTTGGCACAATTGGAAATGTTTCTCAAGGCCCCATT
AAGGAAGCTGGAGGGCGCAGAGGAGGACGAGGCGGAGGGAAAGGAGGAGA
GAGCGATGGTAGGGGGGGAAAAGAAGAGGATTGAGGAATGCCTGGGGCAG
GTGAGGGCAAAATGGGAGGAGTTGAAGGGACGCCGAAAGGATTAAAGGAG
GGAGGAGAGCGGGGAGGGGGGGCGTGAAGAAGTAATAGAAAGTATCGGTC
ATC back to topprotein sequence of jgi.p|Nanoce1779_2|426938 >mRNA_4187-protein ID=mRNA_4187-protein|Name=jgi.p|Nanoce1779_2|426938|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MAYMAQEEWKEALQAFTRVVQQEPDDGRAWGNLAACQMKLNDYTHALIAS
KEAVRHMRDNVEMWENYLTCAARVGRSMDVLYAFHRLLDLRQVQSGSGKT
GNGSLWTPDLSVLTLLVRQAAQLAHKIDKTDYEVTASAALSKQVGELLGR
VTSIITTNPDLWLLYARFNEEVSLPPALAAALDHKTRACRALLSKNGWEK
RRREEGGREGGRVVEALESLVHSHLQQPSVAGLAQLEMFLKAPLRKLEGA
EEDEAEGKEERAMVGGEKKRIEECLGQVRAKWEELKGRRKD* back to topmRNA from alignment at scaffold_8:1079073..1080956- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4187 ID=mRNA_4187|Name=jgi.p|Nanoce1779_2|426938|organism=Nannochloropsis oceanica|type=mRNA|length=1884bp|location=Sequence derived from alignment at scaffold_8:1079073..1080956- (Nannochloropsis oceanica)
GCCGGTTAAAACAGAACAAGGAGATTTGACGGTCAACCGAGGCGAGGGCG
AGGGCGAGGGCGGGATGGAATGGGACGGACGATAAGAAAGAAATCAGGAG
CTGCTGATTCATTCACATCTTCACATCCCCCCAAATCCCAAATCTCAAAT
CCCCTTATATCCCGAATCCCGATTCCCGAACCCCAAATCCGAATTCCCCT
TCTTTTTCTATTTCCTCCGTCCCCCTTTATGACAGGGGAAATGGCGCGAG
ACCTGCGACCACCTCCAAGCCGCCGTCAAGATCTCTCCCCTCGTGCCCGA
GGTGTGGTTCATCTTGGGCATGGCCTACATGGCTCAGGAAGAGTGGAAGG
AGGCCCTGCAGGTGGGGAGGGGCGGGAGGGGAGGGAGAAAGGGAGGAAGG
GATCTATATAAATATGTGTGGAGTGGGGGAGTGGATGGGGATGGTGTGTG
TGTGTGTATCAACCTACCCTCGCTCACACGACTTCCTTCCTCCCTCCCTC
CCTCTCTCCCAGGCCTTCACCCGCGTAGTCCAACAAGAGCCGGACGACGG
GCGCGCCTGGGGAAACCTTGCCGCCTGTCAAATGAAGCTTAACGATTACA
CTCACGCCTTGATCGCCTCCAAAGAAGCCGTGCGTCACATGCGGGACAAT
GTCGAGATGTGGTAAGCCCTTCCCTCCCTCCCTCCCTCCCGCCCTCCCGC
CCTCCCTCTTCCGGCTCGTCCGGTTTCTCACTACCGTTGTTTCTCGTACT
CTCTCGGCTTGGACCCCCTCCGTTTCTCCTTTCCTTCCTCACCCACTCAC
TCCCCAATACCCTCGCATCCTCCCTGCTCTCCAGGGAGAACTACCTGACC
TGCGCTGCGCGCGTCGGGAGAAGCATGGATGTCCTCTACGCATTTCACCG
GCTTCTCGATTTGAGACAGGTCCAGTCGGGGAGTGGGAAGACAGGCAATG
GTAAGAAGGGAGGGAGGAAGGGAGGGAGACAGGGAGGACGAGGGGGAAAG
AGGGAGGGGGGGAAAGCGGTTTCATGACCTGCTACGTCTGCATTGACAGG
TACCACGCAGGCTGACCTCGAAATTCCTCCTTCCCTCCTTCCTTCCCTCT
TTCCCTCCCTACTTCAGGTTCCCTCTGGACGCCTGATCTGAGCGTGCTTA
CCCTCCTCGTCCGTCAAGCCGCCCAACTCGCACACAAAATCGACAAGACC
GACTACGAAGTCACAGCCTCCGCGGCCCTGAGCAAACAGGTAGGGAGGGA
GGAAGGGAGGGAGGAAGGGAAGGAGTGAGGGGTGCGACGAGCCGCAGAGG
AAGGAAAAATCATGACTGCCGAGCGTTTTACGCATTTCCACCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCTTTTCCCAGGTCGGTGAGCTTTTGGGTCGC
GTCACATCCATCATCACCACCAACCCCGACCTGTGGTTGCTCTATGCCCG
CTTCAACGAGGAGGTCTCCCTCCCCCCCGCCCTCGCCGCTGCCCTTGACC
ACAAGACCCGCGCGTGTCGGGCGTTGCTGAGTAAGAACGGTTGGGAGAAG
AGGAGGAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGTGGTGGAGGCGTT
GGAAAGTCTTGTGCACTCGCACCTGCAGCAGCCGTCGGTTGCGGGCTTGG
CACAATTGGAAATGTTTCTCAAGGCCCCATTAAGGAAGCTGGAGGGCGCA
GAGGAGGACGAGGCGGAGGGAAAGGAGGAGAGAGCGATGGTAGGGGGGGA
AAAGAAGAGGATTGAGGAATGCCTGGGGCAGGTGAGGGCAAAATGGGAGG
AGTTGAAGGGACGCCGAAAGGATTAAAGGAGGGAGGAGAGCGGGGAGGGG
GGGCGTGAAGAAGTAATAGAAAGTATCGGTCATC back to topCoding sequence (CDS) from alignment at scaffold_8:1079073..1080956- >mRNA_4187 ID=mRNA_4187|Name=jgi.p|Nanoce1779_2|426938|organism=Nannochloropsis oceanica|type=CDS|length=4380bp|location=Sequence derived from alignment at scaffold_8:1079073..1080956- (Nannochloropsis oceanica)
GTCGGTGAGCTTTTGGGTCGCGTCACATCCATCATCACCACCAACCCCGA
CCTGTGGTTGCTCTATGCCCGCTTCAACGAGGAGGTCTCCCTCCCCCCCG
CCCTCGCCGCTGCCCTTGACCACAAGACCCGCGCGTGTCGGGCGTTGCTG
AGTAAGAACGGTTGGGAGAAGAGGAGGAGGGAGGAGGGAGGGAGGGAGGG
AGGGAGGGTGGTGGAGGCGTTGGAAAGTCTTGTGCACTCGCACCTGCAGC
AGCCGTCGGTTGCGGGCTTGGCACAATTGGAAATGTTTCTCAAGGCCCCA
TTAAGGAAGCTGGAGGGCGCAGAGGAGGACGAGGCGGAGGGAAAGGAGGA
GAGAGCGATGGTAGGGGGGGAAAAGAAGAGGATTGAGGAATGCCTGGGGC
AGGTGAGGGCAAAATGGGAGGAGTTGAAGGGACGCCGAAAGGATTAAGTT
CCCTCTGGACGCCTGATCTGAGCGTGCTTACCCTCCTCGTCCGTCAAGCC
GCCCAACTCGCACACAAAATCGACAAGACCGACTACGAAGTCACAGCCTC
CGCGGCCCTGAGCAAACAGGGAGAACTACCTGACCTGCGCTGCGCGCGTC
GGGAGAAGCATGGATGTCCTCTACGCATTTCACCGGCTTCTCGATTTGAG
ACAGGTCCAGTCGGGGAGTGGGAAGACAGGCAATGGCCTTCACCCGCGTA
GTCCAACAAGAGCCGGACGACGGGCGCGCCTGGGGAAACCTTGCCGCCTG
TCAAATGAAGCTTAACGATTACACTCACGCCTTGATCGCCTCCAAAGAAG
CCGTGCGTCACATGCGGGACAATGTCGAGATGTGATGGCCTACATGGCTC
AGGAAGAGTGGAAGGAGGCCCTGCAGGTCGGTGAGCTTTTGGGTCGCGTC
ACATCCATCATCACCACCAACCCCGACCTGTGGTTGCTCTATGCCCGCTT
CAACGAGGAGGTCTCCCTCCCCCCCGCCCTCGCCGCTGCCCTTGACCACA
AGACCCGCGCGTGTCGGGCGTTGCTGAGTAAGAACGGTTGGGAGAAGAGG
AGGAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGTGGTGGAGGCGTTGGA
AAGTCTTGTGCACTCGCACCTGCAGCAGCCGTCGGTTGCGGGCTTGGCAC
AATTGGAAATGTTTCTCAAGGCCCCATTAAGGAAGCTGGAGGGCGCAGAG
GAGGACGAGGCGGAGGGAAAGGAGGAGAGAGCGATGGTAGGGGGGGAAAA
GAAGAGGATTGAGGAATGCCTGGGGCAGGTGAGGGCAAAATGGGAGGAGT
TGAAGGGACGCCGAAAGGATTAAGTTCCCTCTGGACGCCTGATCTGAGCG
TGCTTACCCTCCTCGTCCGTCAAGCCGCCCAACTCGCACACAAAATCGAC
AAGACCGACTACGAAGTCACAGCCTCCGCGGCCCTGAGCAAACAGGGAGA
ACTACCTGACCTGCGCTGCGCGCGTCGGGAGAAGCATGGATGTCCTCTAC
GCATTTCACCGGCTTCTCGATTTGAGACAGGTCCAGTCGGGGAGTGGGAA
GACAGGCAATGGCCTTCACCCGCGTAGTCCAACAAGAGCCGGACGACGGG
CGCGCCTGGGGAAACCTTGCCGCCTGTCAAATGAAGCTTAACGATTACAC
TCACGCCTTGATCGCCTCCAAAGAAGCCGTGCGTCACATGCGGGACAATG
TCGAGATGTGATGGCCTACATGGCTCAGGAAGAGTGGAAGGAGGCCCTGC
AGGTCGGTGAGCTTTTGGGTCGCGTCACATCCATCATCACCACCAACCCC
GACCTGTGGTTGCTCTATGCCCGCTTCAACGAGGAGGTCTCCCTCCCCCC
CGCCCTCGCCGCTGCCCTTGACCACAAGACCCGCGCGTGTCGGGCGTTGC
TGAGTAAGAACGGTTGGGAGAAGAGGAGGAGGGAGGAGGGAGGGAGGGAG
GGAGGGAGGGTGGTGGAGGCGTTGGAAAGTCTTGTGCACTCGCACCTGCA
GCAGCCGTCGGTTGCGGGCTTGGCACAATTGGAAATGTTTCTCAAGGCCC
CATTAAGGAAGCTGGAGGGCGCAGAGGAGGACGAGGCGGAGGGAAAGGAG
GAGAGAGCGATGGTAGGGGGGGAAAAGAAGAGGATTGAGGAATGCCTGGG
GCAGGTGAGGGCAAAATGGGAGGAGTTGAAGGGACGCCGAAAGGATTAAG
TTCCCTCTGGACGCCTGATCTGAGCGTGCTTACCCTCCTCGTCCGTCAAG
CCGCCCAACTCGCACACAAAATCGACAAGACCGACTACGAAGTCACAGCC
TCCGCGGCCCTGAGCAAACAGGGAGAACTACCTGACCTGCGCTGCGCGCG
TCGGGAGAAGCATGGATGTCCTCTACGCATTTCACCGGCTTCTCGATTTG
AGACAGGTCCAGTCGGGGAGTGGGAAGACAGGCAATGGCCTTCACCCGCG
TAGTCCAACAAGAGCCGGACGACGGGCGCGCCTGGGGAAACCTTGCCGCC
TGTCAAATGAAGCTTAACGATTACACTCACGCCTTGATCGCCTCCAAAGA
AGCCGTGCGTCACATGCGGGACAATGTCGAGATGTGATGGCCTACATGGC
TCAGGAAGAGTGGAAGGAGGCCCTGCAGGTCGGTGAGCTTTTGGGTCGCG
TCACATCCATCATCACCACCAACCCCGACCTGTGGTTGCTCTATGCCCGC
TTCAACGAGGAGGTCTCCCTCCCCCCCGCCCTCGCCGCTGCCCTTGACCA
CAAGACCCGCGCGTGTCGGGCGTTGCTGAGTAAGAACGGTTGGGAGAAGA
GGAGGAGGGAGGAGGGAGGGAGGGAGGGAGGGAGGGTGGTGGAGGCGTTG
GAAAGTCTTGTGCACTCGCACCTGCAGCAGCCGTCGGTTGCGGGCTTGGC
ACAATTGGAAATGTTTCTCAAGGCCCCATTAAGGAAGCTGGAGGGCGCAG
AGGAGGACGAGGCGGAGGGAAAGGAGGAGAGAGCGATGGTAGGGGGGGAA
AAGAAGAGGATTGAGGAATGCCTGGGGCAGGTGAGGGCAAAATGGGAGGA
GTTGAAGGGACGCCGAAAGGATTAAGTTCCCTCTGGACGCCTGATCTGAG
CGTGCTTACCCTCCTCGTCCGTCAAGCCGCCCAACTCGCACACAAAATCG
ACAAGACCGACTACGAAGTCACAGCCTCCGCGGCCCTGAGCAAACAGGGA
GAACTACCTGACCTGCGCTGCGCGCGTCGGGAGAAGCATGGATGTCCTCT
ACGCATTTCACCGGCTTCTCGATTTGAGACAGGTCCAGTCGGGGAGTGGG
AAGACAGGCAATGGCCTTCACCCGCGTAGTCCAACAAGAGCCGGACGACG
GGCGCGCCTGGGGAAACCTTGCCGCCTGTCAAATGAAGCTTAACGATTAC
ACTCACGCCTTGATCGCCTCCAAAGAAGCCGTGCGTCACATGCGGGACAA
TGTCGAGATGTGATGGCCTACATGGCTCAGGAAGAGTGGAAGGAGGCCCT
GCAGGTCGGTGAGCTTTTGGGTCGCGTCACATCCATCATCACCACCAACC
CCGACCTGTGGTTGCTCTATGCCCGCTTCAACGAGGAGGTCTCCCTCCCC
CCCGCCCTCGCCGCTGCCCTTGACCACAAGACCCGCGCGTGTCGGGCGTT
GCTGAGTAAGAACGGTTGGGAGAAGAGGAGGAGGGAGGAGGGAGGGAGGG
AGGGAGGGAGGGTGGTGGAGGCGTTGGAAAGTCTTGTGCACTCGCACCTG
CAGCAGCCGTCGGTTGCGGGCTTGGCACAATTGGAAATGTTTCTCAAGGC
CCCATTAAGGAAGCTGGAGGGCGCAGAGGAGGACGAGGCGGAGGGAAAGG
AGGAGAGAGCGATGGTAGGGGGGGAAAAGAAGAGGATTGAGGAATGCCTG
GGGCAGGTGAGGGCAAAATGGGAGGAGTTGAAGGGACGCCGAAAGGATTA
AGTTCCCTCTGGACGCCTGATCTGAGCGTGCTTACCCTCCTCGTCCGTCA
AGCCGCCCAACTCGCACACAAAATCGACAAGACCGACTACGAAGTCACAG
CCTCCGCGGCCCTGAGCAAACAGGGAGAACTACCTGACCTGCGCTGCGCG
CGTCGGGAGAAGCATGGATGTCCTCTACGCATTTCACCGGCTTCTCGATT
TGAGACAGGTCCAGTCGGGGAGTGGGAAGACAGGCAATGGCCTTCACCCG
CGTAGTCCAACAAGAGCCGGACGACGGGCGCGCCTGGGGAAACCTTGCCG
CCTGTCAAATGAAGCTTAACGATTACACTCACGCCTTGATCGCCTCCAAA
GAAGCCGTGCGTCACATGCGGGACAATGTCGAGATGTGATGGCCTACATG
GCTCAGGAAGAGTGGAAGGAGGCCCTGCAG back to top
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