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Properties
| Property Name | Value |
|---|
| TranscriptId | 426500 |
| Track | FilteredModels2 |
| ProteinId | 426414 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:1038594..1040497 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4177 ID=mRNA_4177|Name=jgi.p|Nanoce1779_2|426414|organism=Nannochloropsis oceanica|type=mRNA|length=1121bp
CTACCAATACGCACATAAAGGCACGCCGTACACACATGGAGCCACCACGG
CCGCCGTCAGCGGCACTACCCACGCCTCCACCGCCACTACCACTACCAGA
CACCACCGCACATCTCCTGCCTCCGCTTCCTCCTCTTCCCCCCCACTGTG
TCCAAGCGTCAAGCCCATCCCAATCCGGCTTCCTCCGAACTGTCCTTGTT
GTGGGCCTTTCCCCCGCTTCCTTCAAAGATGAGGTTCTCAAGCACCTATG
GCCAAAAAAGTACCATCCGAAGCTCCGACTCGTCTGGTTGAACCGTGATG
ACCCCCCTCCCTCCCTCCCTCCCCCTTGGACCTGGCACGAAACGCACAAA
GCCTCCACTGAAGCGCTGCTCGACAATAAAGATAAAGGCGGTCTTGAAAA
CAAGAATAACGGAGGGTGGGGCGATGCTATTTTTGTAGTGATGGGCGCGG
GGTGCTCGGTGCAGGACTTCGCGCATTTGAAAGTGGCCTGGGCGAATGCC
TACCCGTTTGATAAGGAATTATTGCAGGCATCGGTCGAGGTGGATATGCT
GGACAAACGCGGCCGTCCCCTCCACGAGCCTCTCTGCCTACATACCCTCC
GCTTCATGGCCGTCCTGCGCAAGGCCTACCTGGAACGGCGCCTCCCTCCT
TTCCACCAGTGGCTGCAGCGGGAGCAGGAGAGAATAAGAGGGATCCTTAC
CTTTAATATTGACTCCTTGGAGTTCCTGGCACTGGACGAGGAAAGACGGG
GTAGGATCATGCAGCTCCACGAGAGGCTGCCCCTCCCTCCCTTCATCCCT
CCCTTTGGAACGACCCCGCGGCGCTCGGTCGCCTTGCCTCCTCCTCCTCC
TCCACCACCACCACCCCCTCCCCCTCCCTCTCTTCCTCCCCCTCGACCAA
GCACCGGAGCATTATCAACATAATCTTAGCAGAAGACTCTGGCATCTACA
TGGGCCCTGCCTCTCTCCCTCCCGTCGAGAGCGACGACGGAGCAGGAGGG
GAGGGAGGGAGGGCGGGAGGGAGGGAGGGAGGGCCGATTCGGTCGAGGAG
ATATGTGCAACAGGGGCAGCAGGTGGAGGGATGGGTGGCGCAGATTAAAG
AGGCGGGAATACTGGAGCAGG back to topprotein sequence of jgi.p|Nanoce1779_2|426414 >mRNA_4177-protein ID=mRNA_4177-protein|Name=jgi.p|Nanoce1779_2|426414|organism=Nannochloropsis oceanica|type=polypeptide|length=296bp
MEPPRPPSAALPTPPPPLPLPDTTAHLLPPLPPLPPHCVQASSPSQSGFL
RTVLVVGLSPASFKDEVLKHLWPKKYHPKLRLVWLNRDDPPPSLPPPWTW
HETHKASTEALLDNKDKGGLENKNNGGWGDAIFVVMGAGCSVQDFAHLKV
AWANAYPFDKELLQASVEVDMLDKRGRPLHEPLCLHTLRFMAVLRKAYLE
RRLPPFHQWLQREQERIRGILTFNIDSLEFLALDEERRGRIMQLHERLPL
PPFIPPFGTTPRRSVALPPPPPPPPPPPPPPSLPPPRPSTGALST* back to topmRNA from alignment at scaffold_8:1038594..1040497+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4177 ID=mRNA_4177|Name=jgi.p|Nanoce1779_2|426414|organism=Nannochloropsis oceanica|type=mRNA|length=1904bp|location=Sequence derived from alignment at scaffold_8:1038594..1040497+ (Nannochloropsis oceanica)
CTACCAATACGCACATAAAGGCACGCCGTACACACATGGAGCCACCACGG
CCGCCGTCAGCGGCACTACCCACGCCTCCACCGCCACTACCACTACCAGA
CACCACCGCACATCTCCTGCCTCCGCTTCCTCCTCTTCCCCCCCACTGTG
TCCAAGCGTCAAGCCCATCCCAATCCGGCTTCCTCCGAACTGTCCTTGTT
GTGGGCCTTTCCCCCGCTTCCTTCAAAGATGAGGTTCTCAAGCACCTATG
GCCAAAAAAGTACCATCCGAAGCTCCGACTCGTCTGGTTGAACCGTGATG
ACCCCCCTCCCTCCCTCCCTCCCCCTTGGACCTGGCACGAAACGCACAAA
GCCTCCACTGAAGCGCTGCTCGACAATAAAGATAAAGGCGGTCTTGAAAA
CAAGAATAACGGAGGGTGGGGCGATGCTATTTTTGTAGTGATGGGCGCGG
GGTGCTCGGTGCAGGACTTCGCGCATTTGAAAGTGGCCTGGGCGAATGCC
TACCCGTTTGATAAGGAATTATTGCAGGTAAGGAGAAGGGAGGGGAGGAG
GGGAAAGAGGGAGAAAAGGAGGGAGGGAGGAAAGGGGGGGATGAGTTGTT
CTGCTCATCTTGTCCAACACTCACCCAAACACGAATTATCCTTCCTTCCT
TCCCTCCCTCCCTCCCCCCCCTCCCTCACTCCCTCCCTCACTCCCCCCCT
CCCTCCCTCCCCCCCTCCCTCTCTCGCAGGCATCGGTCGAGGTGGATATG
CTGGACAAACGCGGCCGTCCCCTCCACGAGCCTCTCTGCCTACATACCCT
CCGCTTCATGGCCGTCCTGCGCAAGGTCCGTCTTTCACCTCCCCTCCCTC
CCCCCCGCCCTCCTCCCGCCCTCCCGTCCTCCTTCCTTCCCTCCTTTCCT
CTCTCCCTGCCTTGCCAATTGGAAGTAAGGGGAAAACTTTTCACAGAATC
GGAATTCTTCCTAGAGCTGCTGAGAGCGACATGGCTCACTTTGCGCGCCC
TCTTTCCTTTCCTCTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGT
CTTAGGCCTACCTGGAACGGCGCCTCCCTCCTTTCCACCAGTGGCTGCAG
CGGGAGCAGGAGAGAATAAGAGGGATCCTTACCTTTAATATTGACTCCTT
GGAGTTCCTGGCACTGGACGAGGAAAGACGGGGTAGGATCATGCAGCTCC
ACGGTGAGAGGACGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GAAACGCGTGCATTCGCATGCGCAAAGCACCCAAATACCATCCAGACTAC
GCGAAGGCCTCTTTTCAGTTCCTCCCCTTCTCTCCCTCCTTCCGTCTCTC
CCTCTTTGTTCAGGCAACATCCAGCAGCTAACGACGATGGATTCTCTTGC
CACCTCCTACCCCACCAGAGAGGCTGCCCCTCCCTCCCTTCATCCCTCCC
TTTGGAACGACCCCGCGGTATGCAGGGAGGAAGGGAACGAGGGACGGAGG
GACGGAGGGTGGTTAGGGCACAGGCAAAGAATATTCAGATTTTTATGTCC
ATCCTTCCCTCCTTCCTTCCCTCCCTCCCTCCCTCCGTCCCGTTATGCAT
CAGGCGCTCGGTCGCCTTGCCTCCTCCTCCTCCTCCACCACCACCACCCC
CTCCCCCTCCCTCTCTTCCTCCCCCTCGACCAAGCACCGGAGCATTATCA
ACATAATCTTAGCAGAAGACTCTGGCATCTACATGGGCCCTGCCTCTCTC
CCTCCCGTCGAGAGCGACGACGGAGCAGGAGGGGAGGGAGGGAGGGCGGG
AGGGAGGGAGGGAGGGCCGATTCGGTCGAGGAGATATGTGCAACAGGGGC
AGCAGGTGGAGGGATGGGTGGCGCAGATTAAAGAGGCGGGAATACTGGAG
CAGG back to topCoding sequence (CDS) from alignment at scaffold_8:1038594..1040497+ >mRNA_4177 ID=mRNA_4177|Name=jgi.p|Nanoce1779_2|426414|organism=Nannochloropsis oceanica|type=CDS|length=4440bp|location=Sequence derived from alignment at scaffold_8:1038594..1040497+ (Nannochloropsis oceanica)
ATGGAGCCACCACGGCCGCCGTCAGCGGCACTACCCACGCCTCCACCGCC
ACTACCACTACCAGACACCACCGCACATCTCCTGCCTCCGCTTCCTCCTC
TTCCCCCCCACTGTGTCCAAGCGTCAAGCCCATCCCAATCCGGCTTCCTC
CGAACTGTCCTTGTTGTGGGCCTTTCCCCCGCTTCCTTCAAAGATGAGGT
TCTCAAGCACCTATGGCCAAAAAAGTACCATCCGAAGCTCCGACTCGTCT
GGTTGAACCGTGATGACCCCCCTCCCTCCCTCCCTCCCCCTTGGACCTGG
CACGAAACGCACAAAGCCTCCACTGAAGCGCTGCTCGACAATAAAGATAA
AGGCGGTCTTGAAAACAAGAATAACGGAGGGTGGGGCGATGCTATTTTTG
TAGTGATGGGCGCGGGGTGCTCGGTGCAGGACTTCGCGCATTTGAAAGTG
GCCTGGGCGAATGCCTACCCGTTTGATAAGGAATTATTGCAGGCATCGGT
CGAGGTGGATATGCTGGACAAACGCGGCCGTCCCCTCCACGAGCCTCTCT
GCCTACATACCCTCCGCTTCATGGCCGTCCTGCGCAAGGCCTACCTGGAA
CGGCGCCTCCCTCCTTTCCACCAGTGGCTGCAGCGGGAGCAGGAGAGAAT
AAGAGGGATCCTTACCTTTAATATTGACTCCTTGGAGTTCCTGGCACTGG
ACGAGGAAAGACGGGGTAGGATCATGCAGCTCCACGAGAGGCTGCCCCTC
CCTCCCTTCATCCCTCCCTTTGGAACGACCCCGCGGCGCTCGGTCGCCTT
GCCTCCTCCTCCTCCTCCACCACCACCACCCCCTCCCCCTCCCTCTCTTC
CTCCCCCTCGACCAAGCACCGGAGCATTATCAACATAAATGGAGCCACCA
CGGCCGCCGTCAGCGGCACTACCCACGCCTCCACCGCCACTACCACTACC
AGACACCACCGCACATCTCCTGCCTCCGCTTCCTCCTCTTCCCCCCCACT
GTGTCCAAGCGTCAAGCCCATCCCAATCCGGCTTCCTCCGAACTGTCCTT
GTTGTGGGCCTTTCCCCCGCTTCCTTCAAAGATGAGGTTCTCAAGCACCT
ATGGCCAAAAAAGTACCATCCGAAGCTCCGACTCGTCTGGTTGAACCGTG
ATGACCCCCCTCCCTCCCTCCCTCCCCCTTGGACCTGGCACGAAACGCAC
AAAGCCTCCACTGAAGCGCTGCTCGACAATAAAGATAAAGGCGGTCTTGA
AAACAAGAATAACGGAGGGTGGGGCGATGCTATTTTTGTAGTGATGGGCG
CGGGGTGCTCGGTGCAGGACTTCGCGCATTTGAAAGTGGCCTGGGCGAAT
GCCTACCCGTTTGATAAGGAATTATTGCAGGCATCGGTCGAGGTGGATAT
GCTGGACAAACGCGGCCGTCCCCTCCACGAGCCTCTCTGCCTACATACCC
TCCGCTTCATGGCCGTCCTGCGCAAGGCCTACCTGGAACGGCGCCTCCCT
CCTTTCCACCAGTGGCTGCAGCGGGAGCAGGAGAGAATAAGAGGGATCCT
TACCTTTAATATTGACTCCTTGGAGTTCCTGGCACTGGACGAGGAAAGAC
GGGGTAGGATCATGCAGCTCCACGAGAGGCTGCCCCTCCCTCCCTTCATC
CCTCCCTTTGGAACGACCCCGCGGCGCTCGGTCGCCTTGCCTCCTCCTCC
TCCTCCACCACCACCACCCCCTCCCCCTCCCTCTCTTCCTCCCCCTCGAC
CAAGCACCGGAGCATTATCAACATAAATGGAGCCACCACGGCCGCCGTCA
GCGGCACTACCCACGCCTCCACCGCCACTACCACTACCAGACACCACCGC
ACATCTCCTGCCTCCGCTTCCTCCTCTTCCCCCCCACTGTGTCCAAGCGT
CAAGCCCATCCCAATCCGGCTTCCTCCGAACTGTCCTTGTTGTGGGCCTT
TCCCCCGCTTCCTTCAAAGATGAGGTTCTCAAGCACCTATGGCCAAAAAA
GTACCATCCGAAGCTCCGACTCGTCTGGTTGAACCGTGATGACCCCCCTC
CCTCCCTCCCTCCCCCTTGGACCTGGCACGAAACGCACAAAGCCTCCACT
GAAGCGCTGCTCGACAATAAAGATAAAGGCGGTCTTGAAAACAAGAATAA
CGGAGGGTGGGGCGATGCTATTTTTGTAGTGATGGGCGCGGGGTGCTCGG
TGCAGGACTTCGCGCATTTGAAAGTGGCCTGGGCGAATGCCTACCCGTTT
GATAAGGAATTATTGCAGGCATCGGTCGAGGTGGATATGCTGGACAAACG
CGGCCGTCCCCTCCACGAGCCTCTCTGCCTACATACCCTCCGCTTCATGG
CCGTCCTGCGCAAGGCCTACCTGGAACGGCGCCTCCCTCCTTTCCACCAG
TGGCTGCAGCGGGAGCAGGAGAGAATAAGAGGGATCCTTACCTTTAATAT
TGACTCCTTGGAGTTCCTGGCACTGGACGAGGAAAGACGGGGTAGGATCA
TGCAGCTCCACGAGAGGCTGCCCCTCCCTCCCTTCATCCCTCCCTTTGGA
ACGACCCCGCGGCGCTCGGTCGCCTTGCCTCCTCCTCCTCCTCCACCACC
ACCACCCCCTCCCCCTCCCTCTCTTCCTCCCCCTCGACCAAGCACCGGAG
CATTATCAACATAAATGGAGCCACCACGGCCGCCGTCAGCGGCACTACCC
ACGCCTCCACCGCCACTACCACTACCAGACACCACCGCACATCTCCTGCC
TCCGCTTCCTCCTCTTCCCCCCCACTGTGTCCAAGCGTCAAGCCCATCCC
AATCCGGCTTCCTCCGAACTGTCCTTGTTGTGGGCCTTTCCCCCGCTTCC
TTCAAAGATGAGGTTCTCAAGCACCTATGGCCAAAAAAGTACCATCCGAA
GCTCCGACTCGTCTGGTTGAACCGTGATGACCCCCCTCCCTCCCTCCCTC
CCCCTTGGACCTGGCACGAAACGCACAAAGCCTCCACTGAAGCGCTGCTC
GACAATAAAGATAAAGGCGGTCTTGAAAACAAGAATAACGGAGGGTGGGG
CGATGCTATTTTTGTAGTGATGGGCGCGGGGTGCTCGGTGCAGGACTTCG
CGCATTTGAAAGTGGCCTGGGCGAATGCCTACCCGTTTGATAAGGAATTA
TTGCAGGCATCGGTCGAGGTGGATATGCTGGACAAACGCGGCCGTCCCCT
CCACGAGCCTCTCTGCCTACATACCCTCCGCTTCATGGCCGTCCTGCGCA
AGGCCTACCTGGAACGGCGCCTCCCTCCTTTCCACCAGTGGCTGCAGCGG
GAGCAGGAGAGAATAAGAGGGATCCTTACCTTTAATATTGACTCCTTGGA
GTTCCTGGCACTGGACGAGGAAAGACGGGGTAGGATCATGCAGCTCCACG
AGAGGCTGCCCCTCCCTCCCTTCATCCCTCCCTTTGGAACGACCCCGCGG
CGCTCGGTCGCCTTGCCTCCTCCTCCTCCTCCACCACCACCACCCCCTCC
CCCTCCCTCTCTTCCTCCCCCTCGACCAAGCACCGGAGCATTATCAACAT
AAATGGAGCCACCACGGCCGCCGTCAGCGGCACTACCCACGCCTCCACCG
CCACTACCACTACCAGACACCACCGCACATCTCCTGCCTCCGCTTCCTCC
TCTTCCCCCCCACTGTGTCCAAGCGTCAAGCCCATCCCAATCCGGCTTCC
TCCGAACTGTCCTTGTTGTGGGCCTTTCCCCCGCTTCCTTCAAAGATGAG
GTTCTCAAGCACCTATGGCCAAAAAAGTACCATCCGAAGCTCCGACTCGT
CTGGTTGAACCGTGATGACCCCCCTCCCTCCCTCCCTCCCCCTTGGACCT
GGCACGAAACGCACAAAGCCTCCACTGAAGCGCTGCTCGACAATAAAGAT
AAAGGCGGTCTTGAAAACAAGAATAACGGAGGGTGGGGCGATGCTATTTT
TGTAGTGATGGGCGCGGGGTGCTCGGTGCAGGACTTCGCGCATTTGAAAG
TGGCCTGGGCGAATGCCTACCCGTTTGATAAGGAATTATTGCAGGCATCG
GTCGAGGTGGATATGCTGGACAAACGCGGCCGTCCCCTCCACGAGCCTCT
CTGCCTACATACCCTCCGCTTCATGGCCGTCCTGCGCAAGGCCTACCTGG
AACGGCGCCTCCCTCCTTTCCACCAGTGGCTGCAGCGGGAGCAGGAGAGA
ATAAGAGGGATCCTTACCTTTAATATTGACTCCTTGGAGTTCCTGGCACT
GGACGAGGAAAGACGGGGTAGGATCATGCAGCTCCACGAGAGGCTGCCCC
TCCCTCCCTTCATCCCTCCCTTTGGAACGACCCCGCGGCGCTCGGTCGCC
TTGCCTCCTCCTCCTCCTCCACCACCACCACCCCCTCCCCCTCCCTCTCT
TCCTCCCCCTCGACCAAGCACCGGAGCATTATCAACATAA back to top
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