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Properties
| Property Name | Value |
|---|
| TranscriptId | 586910 |
| Track | FilteredModels2 |
| ProteinId | 586824 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:1036781..1038296 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4176 ID=mRNA_4176|Name=jgi.p|Nanoce1779_2|586824|organism=Nannochloropsis oceanica|type=mRNA|length=1427bp
GTGTTGGCCAGCGCATGTTTTCTTTTTTCTTTTTTATTGGAAGATGCATT
TCAGCCGGTGGCGCTTTCGATCGCATCATTCTGCGAACAGCGCAAACTCT
CTCATAAGATGTTGTCCGTTGTCTTTACCCATAAGGCTTCGCATGCGCCA
TTTCTTCTCAGAAGCAAGCGCTAGTGCCATTTACCCCCCCGCCTTTCTTT
CTTTGTCATTCTCTGTTCACATCATCCGCACGGACAGGACACCAATATAC
ATCAAGACCCGGTCCAAGCCGCTCTCCCTGTGGTACCATGCCCAGATCAT
TCTGCTCTGCCCAGCCTCCCCCCATTCTTCTTTCACTCATCTTTCCTGTG
GCTACTCGATCAATGTTCATTCTCCAAGCCCCCTTTCCTTCCCTTCATCA
TCGCACCATCGTCCTATAAATCTTTCTGACCAACGAAATGCCACTGGACT
TTGTGCACACGCCCGCGGTGAGGGCTGCCGTGAGCGGTGCCGTCGGGTAC
GTGCCCGTGACCACTCCGCTGCTGCTGCTGGCAGCCTTCGGCACGTACTG
ATCGAGCCTTTTTCTACTGCTATAACTGCTGATTCTGGTGATTTTGGTGT
ATTTCATGGTCACCACCTAGACGCTGGTGACGAGGACGGATCGGTAACGG
TGGTGGGCACCGGTTGCCGGACGGGGATTGACGGGGCGACGCTGTTGCTT
GTAGCGCCCCTGCGCGTAATCCTGGGACTAATGGTGGACTGGTTGCTACT
GGTGCGAAATTAGGAGGTTTTGGAACCCCTCCCAAGCCCAGTGTGGTTAG
GGCTGCTGGTGGAGATGCGCGAATGCCAGCCCCTGGAAATCGCACGGGGT
ACCAGTGGGAAAGGCAACCTGCAGCTGTGCATGGTGGTGGTGAAATGGTT
TGGGTCCTATGGCTTGAGCTGACGAGGATCCCTGCTGCATCTCCGGGGTA
TGCTATTGGTACTGTTCCGGAGCTATCTGGTGGTGGTGGTGGTAATGTTG
GTACTCCTTGTTTTCCTCTTGCAGGCGTACTACGGCTTGAGTATCGGTCG
CGAGGTAGCTTGTAGGCGGCAATGGCAGAAAGACACGGCGAGGCCCATCA
AGGCAAACAGGTACATACATTTACAAAAAGTCAGAACACCGGCGGTGTTA
GTAACCACCGATACAAAGAACAGTACTAACAAGAGCGGGCTGGCGAACGA
GTTTTCCTCATCTCTTGAACCTTTGTAGTTTTCTTATTTTCATTTTTTAA
GGCATGCAAGTCGTCGCGTTATCTCTTCCTGTTCATCATTCGCTTCCTTC
TCCCGCTTTTGGCCTTCCTTCTTACAAATCTTTCTCCCCTCGGCATCATC
TGTGCGTACAATCCCATCACTCCCTCCCTCAAACAATTCTTGATCCTTTC
GCACCCTTCCTTCCTCAGTGGACACCT back to topprotein sequence of jgi.p|Nanoce1779_2|586824 >mRNA_4176-protein ID=mRNA_4176-protein|Name=jgi.p|Nanoce1779_2|586824|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp
MHFSRWRFRSHHSANSANSLIRCCPLSLPIRLRMRHFFSEASASAIYPPA
FLSLSFSVHIIRTDRTPIYIKTRSKPLSLWYHAQIILLCPASPHSSFTHL
SCGYSINVHSPSPLSFPSSSHHRPINLSDQRNATGLCAHARGEGCRERCR
RVRARDHSAAAAGSLRHVLIEPFSTAITADSGDFGVFHGHHLDAGDEDGS
VTVVGTGCRTGIDGATLLLVAPLRVILGLMVDWLLLVRN* back to topmRNA from alignment at scaffold_8:1036781..1038296- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4176 ID=mRNA_4176|Name=jgi.p|Nanoce1779_2|586824|organism=Nannochloropsis oceanica|type=mRNA|length=1516bp|location=Sequence derived from alignment at scaffold_8:1036781..1038296- (Nannochloropsis oceanica)
GTGTTGGCCAGCGCATGTTTTCTTTTTTCTTTTTTATTGGAAGATGCATT
TCAGCCGGTGGCGCTTTCGATCGCATCATTCTGCGAACAGCGCAAACTCT
CTCATAAGATGTTGTCCGTTGTCTTTACCCATAAGGCTTCGCATGCGCCA
TTTCTTCTCAGAAGCAAGCGCTAGTGCCATTTACCCCCCCGCCTTTCTTT
CTTTGTCATTCTCTGTTCACATCATCCGCACGGACAGGACACCAATATAC
ATCAAGACCCGGTCCAAGCCGCTCTCCCTGTGGTACCATGCCCAGATCAT
TCTGCTCTGCCCAGCCTCCCCCCATTCTTCTTTCACTCATCTTTCCTGTG
GCTACTCGATCAATGTTCATTCTCCAAGCCCCCTTTCCTTCCCTTCATCA
TCGCACCATCGTCCTATAAATCTTTCTGACCAACGAAATGCCACTGGACT
TTGTGCACACGCCCGCGGTGAGGGCTGCCGTGAGCGGTGCCGTCGGGTAC
GTGCCCGTGACCACTCCGCTGCTGCTGCTGGCAGCCTTCGGCACGTACTG
ATCGAGCCTTTTTCTACTGCTATAACTGCTGATTCTGGTGATTTTGGTGT
ATTTCATGGTCACCACCTAGACGCTGGTGACGAGGACGGATCGGTAACGG
TGGTGGGCACCGGTTGCCGGACGGGGATTGACGGGGCGACGCTGTTGCTT
GTAGCGCCCCTGCGCGTAATCCTGGGACTAATGGTGGACTGGTTGCTACT
GGTGCGAAATTAGGAGGTTTTGGAACCCCTCCCAAGCCCAGTGTGGTTAG
GGCTGCTGGTGGAGATGCGCGAATGCCAGCCCCTGGAAATCGCACGGGGT
ACCAGTGGGAAAGGCAACCTGCAGCTGTGCATGGTGGTGGTGAAATGGTT
TGGGTCCTATGGCTTGAGCTGACGAGGATCCCTGCTGCATCTCCGGGGTA
TGCTATTGGTACTGTTCCGGAGCTATCTGGTGGTGGTGGTGGTAATGTTG
GTACTCCTTGTTTTCCTCTTGCAGGCGTACTACGGCTTGAGTATCGGTCG
CGAGGTAGCTTGTAGGCGGCAATGGCAGAAAGACACGGCGAGGCCCATCA
AGGCAAACAGGTACATACATTTACAAAAAGTCAGAACACCGGCGGTGTTA
GTAACCACCGATACAAAGAACAGTACTAACAAGAGCGGGCTGGCGAACGA
GTTTTCCTCATCTCTTGAACCTTTGTAGTTTTCTTATTTTCATTTTTTAA
GGCATGCAAGTCGTCGCGTTATCTCTTCCTGTTCATCATTCGCTTCCTTC
TCCCGCTTTTGGCCTTCCTTCTTACAAATCTTTCTCCCCTCCCCCCCCTC
CTCCCAACCCCCACCACGATGATCCCGCCTTCTCGCCTCCTCCCCCTGCC
TCCCTACCTCCCACCCTCCCTCCCTCCCCCGGCATCATCTGTGCGTACAA
TCCCATCACTCCCTCCCTCAAACAATTCTTGATCCTTTCGCACCCTTCCT
TCCTCAGTGGACACCT back to topCoding sequence (CDS) from alignment at scaffold_8:1036781..1038296- >mRNA_4176 ID=mRNA_4176|Name=jgi.p|Nanoce1779_2|586824|organism=Nannochloropsis oceanica|type=CDS|length=720bp|location=Sequence derived from alignment at scaffold_8:1036781..1038296- (Nannochloropsis oceanica)
ATGCATTTCAGCCGGTGGCGCTTTCGATCGCATCATTCTGCGAACAGCGC
AAACTCTCTCATAAGATGTTGTCCGTTGTCTTTACCCATAAGGCTTCGCA
TGCGCCATTTCTTCTCAGAAGCAAGCGCTAGTGCCATTTACCCCCCCGCC
TTTCTTTCTTTGTCATTCTCTGTTCACATCATCCGCACGGACAGGACACC
AATATACATCAAGACCCGGTCCAAGCCGCTCTCCCTGTGGTACCATGCCC
AGATCATTCTGCTCTGCCCAGCCTCCCCCCATTCTTCTTTCACTCATCTT
TCCTGTGGCTACTCGATCAATGTTCATTCTCCAAGCCCCCTTTCCTTCCC
TTCATCATCGCACCATCGTCCTATAAATCTTTCTGACCAACGAAATGCCA
CTGGACTTTGTGCACACGCCCGCGGTGAGGGCTGCCGTGAGCGGTGCCGT
CGGGTACGTGCCCGTGACCACTCCGCTGCTGCTGCTGGCAGCCTTCGGCA
CGTACTGATCGAGCCTTTTTCTACTGCTATAACTGCTGATTCTGGTGATT
TTGGTGTATTTCATGGTCACCACCTAGACGCTGGTGACGAGGACGGATCG
GTAACGGTGGTGGGCACCGGTTGCCGGACGGGGATTGACGGGGCGACGCT
GTTGCTTGTAGCGCCCCTGCGCGTAATCCTGGGACTAATGGTGGACTGGT
TGCTACTGGTGCGAAATTAG back to top
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