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Properties
| Property Name | Value |
|---|
| TranscriptId | 586818 |
| Track | FilteredModels2 |
| ProteinId | 586732 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:962975..964585 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4152 ID=mRNA_4152|Name=jgi.p|Nanoce1779_2|586732|organism=Nannochloropsis oceanica|type=mRNA|length=1611bp
CCCTTCCTCCTCCTCCTCCTGCTCCATCACCAGTAGCAGTAGCAGCAGCA
GTGCTGGTAGACACTAAACGCTCTCGATACGCACCTTTCCCGGTCGGTCC
CGGCTCAAACCCGAAATAACGCCACGCCTTATCTCGCAATGTATGCACGT
CCTTCACCATGGCCTGCACGTCCAGAAACGCCTCCTTCTCCTCTCTCTCT
CCCTCCCCTTCTCCTCCTTGATTTAAGGCAAGATTATGGGCCATAACGGC
GCCGTTTTGAACCAGTAACTGCAAGTGTCGGACCATTTGAGAGGCGAGTC
GACCCCGTTCATCTTCCCTCACGCCGGTGTGCATGAGTGCCTGCCAGGTG
CCAGGGGAGAGACCAAAGCGAGGACCAGGGTGGGAGGGCAGGAGGGGGAC
GAGTAGGCGGCCTTGGGCATTGCGTGTAGGTGCTGCTGTAGGGGCGTGGG
CCTGGACGTGCTGTTGCGGGAGATTGGCGAGGTAGCTCATTGCACCTGTC
TCGGCCAGCAGCTCCTCTACCTCTTGTAAAGGAATCGCATCGTCTTCATC
GTCTTCAAAATCATCACCACTGCTGCTGCTGGTGCTACTGCTCCCACTAT
CCCTACTCGTACTATCGACATCGACATCGTCATCGTCGTCGCTCTCCTCC
TCTTCCTCCTCTTCCTCCTCATTCGGGTCATACGTAGGGTCCCTCTCCTC
CTCCTCGTCAGCGAACCAGTTTCCGTCCCCGTCTGCCACCAATGAATCCA
AAAGAAATTGGTAATCAGGGTCACCAAACTCAGTTGGCGCCTTCTCCGAC
ATGGCGAGATTCCCCCCCCCTTCCCCTTCACCAGCACCACCCACATACCC
CCCTATCAGACTGTGTTGGGGAGAAGGAGGAGGAGACGCATGTGGACCTA
TGGCTGCGGATACTGTTGTTCTTCTTCTCCTTGTTGATGTTGCTGTTCTT
ACTTCTGTTGCCGATGGTGGTACTGGGGCTTGGGCTGACATGCGGCCGAG
AAGCAAGTGTGGGGGCGGTGGAGTGGGGTCTACTTCTGAGCATGGAGTTG
TGATGCTGGTGGTATTGTTGAAAGTGGTATTGGTCGTACCAAACGTGCCG
CCTGCGCCACCACCATGGCCCCTACCACCACCGCCGCCACCGCTGCTGGT
ACTCGTAGGGGGCCAGGCCGACGAGGAAGCCTCAAATCGACTGGTGAACT
GGCTGCTAAACAGTAAGGAAGGGGAAGGTGGAGACCCTAGCGAGGAGGCG
AGCATGGATGCAGGTGGGGAAGACAGGGAGGGAGGCATGAATGACAGATG
GCTGTTGCTGGAGGTGGCATGCCGGTGGTGGTCTACGAGGTTGCTACTGC
ATGAGGGGCCTCCCCCGCCACTAGGCAGCGGGGCCAGCAATGGTAGCAAC
GATGGTGGCTGAGCCGCAGTTACCGCAGCCGCAGCTGCTCCTGCCGCTGC
CTCCTCTTGCCTCCTCTTTCGGTCTTGTTGCTTCTGGTAGAAGGACGGCA
TCGGACAGGAGGTGGGGGTCTTCAGGCCTCGAGGGATAACAGGTGGGTCA
TCATAACTAGGTTCGCGCGCGGCTAATTCTATCGTTGGTTTGCCAAGTCT
GGTGCTGCCTG back to topprotein sequence of jgi.p|Nanoce1779_2|586732 >mRNA_4152-protein ID=mRNA_4152-protein|Name=jgi.p|Nanoce1779_2|586732|organism=Nannochloropsis oceanica|type=polypeptide|length=204bp
MARFPPPSPSPAPPTYPPIRLCWGEGGGDACGPMAADTVVLLLLVDVAVL
TSVADGGTGAWADMRPRSKCGGGGVGSTSEHGVVMLVVLLKVVLVVPNVP
PAPPPWPLPPPPPPLLVLVGGQADEEASNRLVNWLLNSKEGEGGDPSEEA
SMDAGGEDREGGMNDRWLLLEVACRWWSTRLLLHEGPPPPLGSGASNGSN
DGG* back to topmRNA from alignment at scaffold_8:962975..964585- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4152 ID=mRNA_4152|Name=jgi.p|Nanoce1779_2|586732|organism=Nannochloropsis oceanica|type=mRNA|length=1611bp|location=Sequence derived from alignment at scaffold_8:962975..964585- (Nannochloropsis oceanica)
CCCTTCCTCCTCCTCCTCCTGCTCCATCACCAGTAGCAGTAGCAGCAGCA
GTGCTGGTAGACACTAAACGCTCTCGATACGCACCTTTCCCGGTCGGTCC
CGGCTCAAACCCGAAATAACGCCACGCCTTATCTCGCAATGTATGCACGT
CCTTCACCATGGCCTGCACGTCCAGAAACGCCTCCTTCTCCTCTCTCTCT
CCCTCCCCTTCTCCTCCTTGATTTAAGGCAAGATTATGGGCCATAACGGC
GCCGTTTTGAACCAGTAACTGCAAGTGTCGGACCATTTGAGAGGCGAGTC
GACCCCGTTCATCTTCCCTCACGCCGGTGTGCATGAGTGCCTGCCAGGTG
CCAGGGGAGAGACCAAAGCGAGGACCAGGGTGGGAGGGCAGGAGGGGGAC
GAGTAGGCGGCCTTGGGCATTGCGTGTAGGTGCTGCTGTAGGGGCGTGGG
CCTGGACGTGCTGTTGCGGGAGATTGGCGAGGTAGCTCATTGCACCTGTC
TCGGCCAGCAGCTCCTCTACCTCTTGTAAAGGAATCGCATCGTCTTCATC
GTCTTCAAAATCATCACCACTGCTGCTGCTGGTGCTACTGCTCCCACTAT
CCCTACTCGTACTATCGACATCGACATCGTCATCGTCGTCGCTCTCCTCC
TCTTCCTCCTCTTCCTCCTCATTCGGGTCATACGTAGGGTCCCTCTCCTC
CTCCTCGTCAGCGAACCAGTTTCCGTCCCCGTCTGCCACCAATGAATCCA
AAAGAAATTGGTAATCAGGGTCACCAAACTCAGTTGGCGCCTTCTCCGAC
ATGGCGAGATTCCCCCCCCCTTCCCCTTCACCAGCACCACCCACATACCC
CCCTATCAGACTGTGTTGGGGAGAAGGAGGAGGAGACGCATGTGGACCTA
TGGCTGCGGATACTGTTGTTCTTCTTCTCCTTGTTGATGTTGCTGTTCTT
ACTTCTGTTGCCGATGGTGGTACTGGGGCTTGGGCTGACATGCGGCCGAG
AAGCAAGTGTGGGGGCGGTGGAGTGGGGTCTACTTCTGAGCATGGAGTTG
TGATGCTGGTGGTATTGTTGAAAGTGGTATTGGTCGTACCAAACGTGCCG
CCTGCGCCACCACCATGGCCCCTACCACCACCGCCGCCACCGCTGCTGGT
ACTCGTAGGGGGCCAGGCCGACGAGGAAGCCTCAAATCGACTGGTGAACT
GGCTGCTAAACAGTAAGGAAGGGGAAGGTGGAGACCCTAGCGAGGAGGCG
AGCATGGATGCAGGTGGGGAAGACAGGGAGGGAGGCATGAATGACAGATG
GCTGTTGCTGGAGGTGGCATGCCGGTGGTGGTCTACGAGGTTGCTACTGC
ATGAGGGGCCTCCCCCGCCACTAGGCAGCGGGGCCAGCAATGGTAGCAAC
GATGGTGGCTGAGCCGCAGTTACCGCAGCCGCAGCTGCTCCTGCCGCTGC
CTCCTCTTGCCTCCTCTTTCGGTCTTGTTGCTTCTGGTAGAAGGACGGCA
TCGGACAGGAGGTGGGGGTCTTCAGGCCTCGAGGGATAACAGGTGGGTCA
TCATAACTAGGTTCGCGCGCGGCTAATTCTATCGTTGGTTTGCCAAGTCT
GGTGCTGCCTG back to topCoding sequence (CDS) from alignment at scaffold_8:962975..964585- >mRNA_4152 ID=mRNA_4152|Name=jgi.p|Nanoce1779_2|586732|organism=Nannochloropsis oceanica|type=CDS|length=612bp|location=Sequence derived from alignment at scaffold_8:962975..964585- (Nannochloropsis oceanica)
ATGGCGAGATTCCCCCCCCCTTCCCCTTCACCAGCACCACCCACATACCC
CCCTATCAGACTGTGTTGGGGAGAAGGAGGAGGAGACGCATGTGGACCTA
TGGCTGCGGATACTGTTGTTCTTCTTCTCCTTGTTGATGTTGCTGTTCTT
ACTTCTGTTGCCGATGGTGGTACTGGGGCTTGGGCTGACATGCGGCCGAG
AAGCAAGTGTGGGGGCGGTGGAGTGGGGTCTACTTCTGAGCATGGAGTTG
TGATGCTGGTGGTATTGTTGAAAGTGGTATTGGTCGTACCAAACGTGCCG
CCTGCGCCACCACCATGGCCCCTACCACCACCGCCGCCACCGCTGCTGGT
ACTCGTAGGGGGCCAGGCCGACGAGGAAGCCTCAAATCGACTGGTGAACT
GGCTGCTAAACAGTAAGGAAGGGGAAGGTGGAGACCCTAGCGAGGAGGCG
AGCATGGATGCAGGTGGGGAAGACAGGGAGGGAGGCATGAATGACAGATG
GCTGTTGCTGGAGGTGGCATGCCGGTGGTGGTCTACGAGGTTGCTACTGC
ATGAGGGGCCTCCCCCGCCACTAGGCAGCGGGGCCAGCAATGGTAGCAAC
GATGGTGGCTGA back to top
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