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Properties
| Property Name | Value |
|---|
| TranscriptId | 554472 |
| Track | FilteredModels2 |
| ProteinId | 554386 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:893977..895234 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4125 ID=mRNA_4125|Name=jgi.p|Nanoce1779_2|554386|organism=Nannochloropsis oceanica|type=mRNA|length=1038bp
CGGCACGGCTTCTTGCACCGCTTGGCTGTCGCTGCGGCTGCGGGAGTTTT
GGGTAGCAGTACCAGCAGTACGTCTGGACCTCTCACTCTCCCACCCACCG
CCAAAGCCATTGGGGAGTTGGCTGAGTGGGCACCGGACCAACGATTCTTG
CAGCACCTTGTGATTAATGTGCCGGACATGGCAGCAGCGCTGTCGTTTTA
CCTTGATGGGTTGCAGATGCAGATGTTGCGGACGCGTATTGTGAATGGGA
AGAATGGCACCTTTGTGGGTTTTGGACCAGAGACGTTGAAAGTGCCAGGG
GATTGGTATCCTGGCGTTTCTTCGTTCGGGGTGTATGGGGCACACTTTTC
TCTGGAACTAAATGAGGTGTCCAAGGCGGGAGAGGGCGGCGACACCCCCA
TCCTCGACCCGGGCACCGCCGTCGCCTATCTCCAACTCGCCGTTCCCTCC
CTCCGTCTCTCGAAGCTGGTGGAATCGGGCGGAGTTGTCAAGTCAGCTTA
TGGGTGGGTGCTGGTAGACTCACCCGGGGGGCTACGGCATCAGGTCATCG
TCGGCTCCCGCCGAGACCCCGTAATGATGCTTGCATTGAATGTCCCCGAC
TTGAAGAAAGCCACAGATTTCTACACCAACGTCATGGGAATGAAAGAGCA
AGAGTATCCGCTCTCTCGCATTCCCGAGTCGATCTACGAACCTAAGCAGC
CCAAGGGGAGTAAATATCTTGCCTATAACGAGGACGGGTTCGGGATCCTC
CTCCTCCCCCTCCCCAAGAAAGAGGCAAAGAACGGAGTACGCCTTGGCGG
GGTCGTAGACAAATTAGCGGTTTTGGCGACGGACGTGGTGGGGAAGGGAG
GGGCGGAGGCATGGAAGGAGGGAGGGGTGGAGGTGAAGTACGCGGGCGAG
GCACCGGGGATAGGGACGAGGGTGGCCTTGACCGCCGATCCGAACACTGG
CCTGGGCCTGGTGCTGGTGGAGAGGGAGGATTTAGAGAAGGAGCTCGTGG
GAACGCCCTCGGCGGGGGGAGGAAAGATTCAGGGATAG back to topprotein sequence of jgi.p|Nanoce1779_2|554386 >mRNA_4125-protein ID=mRNA_4125-protein|Name=jgi.p|Nanoce1779_2|554386|organism=Nannochloropsis oceanica|type=polypeptide|length=287bp
MAAALSFYLDGLQMQMLRTRIVNGKNGTFVGFGPETLKVPGDWYPGVSSF
GVYGAHFSLELNEVSKAGEGGDTPILDPGTAVAYLQLAVPSLRLSKLVES
GGVVKSAYGWVLVDSPGGLRHQVIVGSRRDPVMMLALNVPDLKKATDFYT
NVMGMKEQEYPLSRIPESIYEPKQPKGSKYLAYNEDGFGILLLPLPKKEA
KNGVRLGGVVDKLAVLATDVVGKGGAEAWKEGGVEVKYAGEAPGIGTRVA
LTADPNTGLGLVLVEREDLEKELVGTPSAGGGKIQG* back to topmRNA from alignment at scaffold_8:893977..895234+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4125 ID=mRNA_4125|Name=jgi.p|Nanoce1779_2|554386|organism=Nannochloropsis oceanica|type=mRNA|length=1258bp|location=Sequence derived from alignment at scaffold_8:893977..895234+ (Nannochloropsis oceanica)
CGGCACGGCTTCTTGCACCGCTTGGCTGTCGCTGCGGCTGCGGGAGTTTT
GGGTAGCAGTACCAGCAGTACGTCTGGACCTCTCACTCTCCCACCCACCG
CCAAAGCCATTGGGGAGTTGGCTGAGTGGGCACCGGACCAACGATTCTTG
CAGCACCTTGTGATTAATGTGCCGGACATGGCAGCAGCGCTGTCGTTTTA
CCTTGATGGGTTGCAGATGCAGATGTTGCGGACGCGTATTGTGAATGGGA
AGAATGGCACCTTTGTGGGTTTTGGACCAGAGACGTTGAAAGTGCCAGGG
GATTGGTATCCTGGCGTTTCTTCGTTCGGGGTGTATGGGGCACACTTTTC
TCTGGAACTAAATGAGGTGTCCAAGGCGGGAGAGGTGAGTAAAAGAGTTG
CGGAGGGAGGGAGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGA
CAGTGGGAGGACGGTCTGTATGCATGAATGGGCATATGGACGGAGAAATG
CAAAGAAACATTCGTAAGAGTGGATAAGAATTGGGGAAGTAGGAGATGTG
GCCGTTGAAATCAGCAGTTTCTTCCTTCTCCTCCTATCTCCTTTTCCCCT
TAAGGGCGGCGACACCCCCATCCTCGACCCGGGCACCGCCGTCGCCTATC
TCCAACTCGCCGTTCCCTCCCTCCGTCTCTCGAAGCTGGTGGAATCGGGC
GGAGTTGTCAAGTCAGCTTATGGGTGGGTGCTGGTAGACTCACCCGGGGG
GCTACGGCATCAGGTCATCGTCGGCTCCCGCCGAGACCCCGTAATGATGC
TTGCATTGAATGTCCCCGACTTGAAGAAAGCCACAGATTTCTACACCAAC
GTCATGGGAATGAAAGAGCAAGAGTATCCGCTCTCTCGCATTCCCGAGTC
GATCTACGAACCTAAGCAGCCCAAGGGGAGTAAATATCTTGCCTATAACG
AGGACGGGTTCGGGATCCTCCTCCTCCCCCTCCCCAAGAAAGAGGCAAAG
AACGGAGTACGCCTTGGCGGGGTCGTAGACAAATTAGCGGTTTTGGCGAC
GGACGTGGTGGGGAAGGGAGGGGCGGAGGCATGGAAGGAGGGAGGGGTGG
AGGTGAAGTACGCGGGCGAGGCACCGGGGATAGGGACGAGGGTGGCCTTG
ACCGCCGATCCGAACACTGGCCTGGGCCTGGTGCTGGTGGAGAGGGAGGA
TTTAGAGAAGGAGCTCGTGGGAACGCCCTCGGCGGGGGGAGGAAAGATTC
AGGGATAG back to topCoding sequence (CDS) from alignment at scaffold_8:893977..895234+ >mRNA_4125 ID=mRNA_4125|Name=jgi.p|Nanoce1779_2|554386|organism=Nannochloropsis oceanica|type=CDS|length=1722bp|location=Sequence derived from alignment at scaffold_8:893977..895234+ (Nannochloropsis oceanica)
ATGGCAGCAGCGCTGTCGTTTTACCTTGATGGGTTGCAGATGCAGATGTT
GCGGACGCGTATTGTGAATGGGAAGAATGGCACCTTTGTGGGTTTTGGAC
CAGAGACGTTGAAAGTGCCAGGGGATTGGTATCCTGGCGTTTCTTCGTTC
GGGGTGTATGGGGCACACTTTTCTCTGGAACTAAATGAGGTGTCCAAGGC
GGGAGAGGGCGGCGACACCCCCATCCTCGACCCGGGCACCGCCGTCGCCT
ATCTCCAACTCGCCGTTCCCTCCCTCCGTCTCTCGAAGCTGGTGGAATCG
GGCGGAGTTGTCAAGTCAGCTTATGGGTGGGTGCTGGTAGACTCACCCGG
GGGGCTACGGCATCAGGTCATCGTCGGCTCCCGCCGAGACCCCGTAATGA
TGCTTGCATTGAATGTCCCCGACTTGAAGAAAGCCACAGATTTCTACACC
AACGTCATGGGAATGAAAGAGCAAGAGTATCCGCTCTCTCGCATTCCCGA
GTCGATCTACGAACCTAAGCAGCCCAAGGGGAGTAAATATCTTGCCTATA
ACGAGGACGGGTTCGGGATCCTCCTCCTCCCCCTCCCCAAGAAAGAGGCA
AAGAACGGAGTACGCCTTGGCGGGGTCGTAGACAAATTAGCGGTTTTGGC
GACGGACGTGGTGGGGAAGGGAGGGGCGGAGGCATGGAAGGAGGGAGGGG
TGGAGGTGAAGTACGCGGGCGAGGCACCGGGGATAGGGACGAGGGTGGCC
TTGACCGCCGATCCGAACACTGGCCTGGGCCTGGTGCTGGTGGAGAGGGA
GGATTTAGAGAAGGAGCTCGTGGGAACGCCCTCGGCGGGGGGAGGAAAGA
TTCAGGGATAGATGGCAGCAGCGCTGTCGTTTTACCTTGATGGGTTGCAG
ATGCAGATGTTGCGGACGCGTATTGTGAATGGGAAGAATGGCACCTTTGT
GGGTTTTGGACCAGAGACGTTGAAAGTGCCAGGGGATTGGTATCCTGGCG
TTTCTTCGTTCGGGGTGTATGGGGCACACTTTTCTCTGGAACTAAATGAG
GTGTCCAAGGCGGGAGAGGGCGGCGACACCCCCATCCTCGACCCGGGCAC
CGCCGTCGCCTATCTCCAACTCGCCGTTCCCTCCCTCCGTCTCTCGAAGC
TGGTGGAATCGGGCGGAGTTGTCAAGTCAGCTTATGGGTGGGTGCTGGTA
GACTCACCCGGGGGGCTACGGCATCAGGTCATCGTCGGCTCCCGCCGAGA
CCCCGTAATGATGCTTGCATTGAATGTCCCCGACTTGAAGAAAGCCACAG
ATTTCTACACCAACGTCATGGGAATGAAAGAGCAAGAGTATCCGCTCTCT
CGCATTCCCGAGTCGATCTACGAACCTAAGCAGCCCAAGGGGAGTAAATA
TCTTGCCTATAACGAGGACGGGTTCGGGATCCTCCTCCTCCCCCTCCCCA
AGAAAGAGGCAAAGAACGGAGTACGCCTTGGCGGGGTCGTAGACAAATTA
GCGGTTTTGGCGACGGACGTGGTGGGGAAGGGAGGGGCGGAGGCATGGAA
GGAGGGAGGGGTGGAGGTGAAGTACGCGGGCGAGGCACCGGGGATAGGGA
CGAGGGTGGCCTTGACCGCCGATCCGAACACTGGCCTGGGCCTGGTGCTG
GTGGAGAGGGAGGATTTAGAGAAGGAGCTCGTGGGAACGCCCTCGGCGGG
GGGAGGAAAGATTCAGGGATAG back to top
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