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Properties
| Property Name | Value |
|---|
| TranscriptId | 586479 |
| Track | FilteredModels2 |
| ProteinId | 586393 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:763972..765075 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4070 ID=mRNA_4070|Name=jgi.p|Nanoce1779_2|586393|organism=Nannochloropsis oceanica|type=mRNA|length=798bp
ACAGAAACCTGCCATCTACTCACATCATGAAGCCCTGCCATCTTTTGTTT
GCGGCCCTTTCCTTCCAGGCATCCGCCTTCCTCCTCCCCCCTTCTCTTCC
CTCCTCCCGGGATGCAGTCGTCTTGAGCGCAGCCCGCACGAACGATGCAG
TTTCGTCCCGGCAACAGCACATCGGCATTTCCCTCCGTTCTTTGTCACTC
GCAGGACTTGGCACCGCGGTCGTGTTGGCGCGCGACATGGCGCCGGCAAA
TGCGAAAGAGAAGCCCGAGTATCTGAAGGAGCCTACGCCCGAGTTTGAGG
CAATGCAAAAGCGCGCCATGGAGTTTGAAAAACTAGCTCTCGAGAAGAAG
AGGGTCTGGAAGGACAAGTACGCCGTGCTACCCGAAGCCAAGACGGAGGA
TGAGTTAGTGAAGGCCCTGGATGGACTCACCGCCTTCGTCCTGGCTGAAC
GAGGATTGCCGGTTGGCATTAAGAAGCAGGCCTTGGTCAGCGATATCCGC
AAGGTGAAACGAGCGGGAAAGGAGGCCAAAATCTGGAACAAGAATGCGGA
GATCTCCTACGAGCAGCTGATCTATTCCATCAACTACGAACAAAGCCCTA
ATACAGCTCGTGACCTGACGGCGCCTTTATAGGATGGGAAAGTAAGGGTC
AGATGGAGGGTTAAAATAGAAGAGCGGGGAGTGCGGGTAGTGAGTGAGGG
AGATCGGCGTTTTGATGCTCTCCAGTGATTTACTTTCGTGGGGGACCTCA
GATGAAGATAAAAGAGCTTTTATAATAACTACATACAAAAGGACTGGA back to topprotein sequence of jgi.p|Nanoce1779_2|586393 >mRNA_4070-protein ID=mRNA_4070-protein|Name=jgi.p|Nanoce1779_2|586393|organism=Nannochloropsis oceanica|type=polypeptide|length=202bp
MKPCHLLFAALSFQASAFLLPPSLPSSRDAVVLSAARTNDAVSSRQQHIG
ISLRSLSLAGLGTAVVLARDMAPANAKEKPEYLKEPTPEFEAMQKRAMEF
EKLALEKKRVWKDKYAVLPEAKTEDELVKALDGLTAFVLAERGLPVGIKK
QALVSDIRKVKRAGKEAKIWNKNAEISYEQLIYSINYEQSPNTARDLTAP
L* back to topmRNA from alignment at scaffold_8:763972..765075+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4070 ID=mRNA_4070|Name=jgi.p|Nanoce1779_2|586393|organism=Nannochloropsis oceanica|type=mRNA|length=1104bp|location=Sequence derived from alignment at scaffold_8:763972..765075+ (Nannochloropsis oceanica)
ACAGAAACCTGCCATCTACTCACATCATGAAGCCCTGCCATCTTTTGTTT
GCGGCCCTTTCCTTCCAGGCATCCGCCTTCCTCCTCCCCCCTTCTCTTCC
CTCCTCCCGGGATGCAGTCGTCTTGAGCGCAGCCCGCACGAACGATGCAG
TTTCGTCCCGGCAACAGCACATCGGCATTTCCCTCCGTTCTTTGTCACTC
GCAGGACTTGGCACCGCGGTCGTGTTGGCGCGCGACATGGCGCCGGCAAA
TGCGAAAGAGAAGCCCGAGTATCTGAAGGAGCCTACGCCCGAGTTTGAGG
TACGTACCTCAAGGCTGCATTAACAGCCAACAATCAATTACGTCTCAGAA
TATTTCATGTCTATGAAACTGGATGCCGAATTATTTTTCTCCCTTCTTGT
TCCGCTTGTCCCTCCCTCACCGCCACCCCCATTAAACCACTTCTTAAGGC
AATGCAAAAGCGCGCCATGGAGTTTGAAAAACTAGCTCTCGAGAAGAAGA
GGGTCTGGAAGGACAAGTACGCCGTGCTACCCGAAGCCAAGACGGAGGAT
GAGTTAGTGAAGGCCCTGGATGGACTCACCGCCTTCGTCCTGGCTGAACG
AGGATTGCCGGTTGGCATTAAGAAGCAGGTGCGTGGGACAAATTATCATC
TCTTTGTTATGAATATTATGTCTATATATATCGCCAGAAAAGGCCTTGGA
ATAAGATTACAAATGGACCTATTCGGCCTGAAAATCCAACCTTAAACATT
CTGAAATCATGCTGAATCATATATGCAAAATACAGGCCTTGGTCAGCGAT
ATCCGCAAGGTGAAACGAGCGGGAAAGGAGGCCAAAATCTGGAACAAGAA
TGCGGAGATCTCCTACGAGCAGCTGATCTATTCCATCAACTACGAACAAA
GCCCTAATACAGCTCGTGACCTGACGGCGCCTTTATAGGATGGGAAAGTA
AGGGTCAGATGGAGGGTTAAAATAGAAGAGCGGGGAGTGCGGGTAGTGAG
TGAGGGAGATCGGCGTTTTGATGCTCTCCAGTGATTTACTTTCGTGGGGG
ACCTCAGATGAAGATAAAAGAGCTTTTATAATAACTACATACAAAAGGAC
TGGA back to topCoding sequence (CDS) from alignment at scaffold_8:763972..765075+ >mRNA_4070 ID=mRNA_4070|Name=jgi.p|Nanoce1779_2|586393|organism=Nannochloropsis oceanica|type=CDS|length=1818bp|location=Sequence derived from alignment at scaffold_8:763972..765075+ (Nannochloropsis oceanica)
ATGAAGCCCTGCCATCTTTTGTTTGCGGCCCTTTCCTTCCAGGCATCCGC
CTTCCTCCTCCCCCCTTCTCTTCCCTCCTCCCGGGATGCAGTCGTCTTGA
GCGCAGCCCGCACGAACGATGCAGTTTCGTCCCGGCAACAGCACATCGGC
ATTTCCCTCCGTTCTTTGTCACTCGCAGGACTTGGCACCGCGGTCGTGTT
GGCGCGCGACATGGCGCCGGCAAATGCGAAAGAGAAGCCCGAGTATCTGA
AGGAGCCTACGCCCGAGTTTGAGGCAATGCAAAAGCGCGCCATGGAGTTT
GAAAAACTAGCTCTCGAGAAGAAGAGGGTCTGGAAGGACAAGTACGCCGT
GCTACCCGAAGCCAAGACGGAGGATGAGTTAGTGAAGGCCCTGGATGGAC
TCACCGCCTTCGTCCTGGCTGAACGAGGATTGCCGGTTGGCATTAAGAAG
CAGGCCTTGGTCAGCGATATCCGCAAGGTGAAACGAGCGGGAAAGGAGGC
CAAAATCTGGAACAAGAATGCGGAGATCTCCTACGAGCAGCTGATCTATT
CCATCAACTACGAACAAAGCCCTAATACAGCTCGTGACCTGACGGCGCCT
TTATAGATGAAGCCCTGCCATCTTTTGTTTGCGGCCCTTTCCTTCCAGGC
ATCCGCCTTCCTCCTCCCCCCTTCTCTTCCCTCCTCCCGGGATGCAGTCG
TCTTGAGCGCAGCCCGCACGAACGATGCAGTTTCGTCCCGGCAACAGCAC
ATCGGCATTTCCCTCCGTTCTTTGTCACTCGCAGGACTTGGCACCGCGGT
CGTGTTGGCGCGCGACATGGCGCCGGCAAATGCGAAAGAGAAGCCCGAGT
ATCTGAAGGAGCCTACGCCCGAGTTTGAGGCAATGCAAAAGCGCGCCATG
GAGTTTGAAAAACTAGCTCTCGAGAAGAAGAGGGTCTGGAAGGACAAGTA
CGCCGTGCTACCCGAAGCCAAGACGGAGGATGAGTTAGTGAAGGCCCTGG
ATGGACTCACCGCCTTCGTCCTGGCTGAACGAGGATTGCCGGTTGGCATT
AAGAAGCAGGCCTTGGTCAGCGATATCCGCAAGGTGAAACGAGCGGGAAA
GGAGGCCAAAATCTGGAACAAGAATGCGGAGATCTCCTACGAGCAGCTGA
TCTATTCCATCAACTACGAACAAAGCCCTAATACAGCTCGTGACCTGACG
GCGCCTTTATAGATGAAGCCCTGCCATCTTTTGTTTGCGGCCCTTTCCTT
CCAGGCATCCGCCTTCCTCCTCCCCCCTTCTCTTCCCTCCTCCCGGGATG
CAGTCGTCTTGAGCGCAGCCCGCACGAACGATGCAGTTTCGTCCCGGCAA
CAGCACATCGGCATTTCCCTCCGTTCTTTGTCACTCGCAGGACTTGGCAC
CGCGGTCGTGTTGGCGCGCGACATGGCGCCGGCAAATGCGAAAGAGAAGC
CCGAGTATCTGAAGGAGCCTACGCCCGAGTTTGAGGCAATGCAAAAGCGC
GCCATGGAGTTTGAAAAACTAGCTCTCGAGAAGAAGAGGGTCTGGAAGGA
CAAGTACGCCGTGCTACCCGAAGCCAAGACGGAGGATGAGTTAGTGAAGG
CCCTGGATGGACTCACCGCCTTCGTCCTGGCTGAACGAGGATTGCCGGTT
GGCATTAAGAAGCAGGCCTTGGTCAGCGATATCCGCAAGGTGAAACGAGC
GGGAAAGGAGGCCAAAATCTGGAACAAGAATGCGGAGATCTCCTACGAGC
AGCTGATCTATTCCATCAACTACGAACAAAGCCCTAATACAGCTCGTGAC
CTGACGGCGCCTTTATAG back to top
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