jgi.p|Nanoce1779_2|586170, mRNA_4020 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|586170
Unique Name	mRNA_4020
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4250
Alignment location	scaffold_8:649418..653667 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	586256
Track	FilteredModels2
ProteinId	586170

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_8	supercontig	scaffold_8:649418..653667 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|586170	gene_4020	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|586170	mRNA_4020-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_4020	CDS_4020	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_8:649418..653667-
coding sequence from alignment at scaffold_8:649418..653667-

mRNA sequence

>mRNA_4020 ID=mRNA_4020|Name=jgi.p|Nanoce1779_2|586170|organism=Nannochloropsis oceanica|type=mRNA|length=4250bp
AACAGAGCACCAACCCCCTGACGCCATCGTCATCAGCACAGCCTGGCAAA
ACATCATGGCCAACAGCAGTGGGAGGGGCAGTAGAAGAAGACGTTTCTAA
GCAGCATACAACCATGTCCTCGACCCGGCAAGGTTACCTATGGAAGCGCC
AAATCAGCGGAGGCGGGAGCCCACCAGCGGTGCAGCGGGTGTTTTGTGTC
TTGGCTGGCACCACGCTCTGGGACTACGACTCGGAGGATGAGGCGGCCTT
GGGGCAACGACCGAGGTCCGAAGTGAACGTGATTGGCGTGTCGCCCTGGG
ACGGTCGGGCGCGGTATCAGAACTACGCGTTTGGGTTCCTTTTCTTGTCG
GCGCAGGGCACGACGTATCATGCGGTGGCGCAGAGCAAGGAGGACCTGGA
GCACTGGCTGTCTGCCATACGCCTGGGCCTGCAGGTCCGGTTTGGCATCA
TGGGGTCAACGGGCGGCGCGGATATTGACGACGAGGAAGAAGATGAGGAA
AAGGTAGACGAGGAGGGAGAAAAGGAGGTGAATGAGGTGGAAGGGGAGGA
GAGTGAATGCAGTCTTTTTCTGCAGGACGAGGCCCAAGGGAGGGCTTTGG
AGGATGGAGGTGATAAACACACCATCACAGCAAGATGCGCGTCCGCATCA
ACCGCCCCAAGAGGAAATAATAAGGGCAGCATGAACGAGGGCAGCATGAA
CCCACCATCGGCAGTACTGACGTGGAAATCACCATCAACACAAAGCACAA
GGAGCGTCACGCCCACATCCACCAAGACCAACTCGGACCCGAGCAGGAGG
GAAAATTGGCACTTTCCCGCTTCTTCCTCCGCTTCCTCGTCCTCCTCTTC
TCCCGTCTCCTCTTCACATAGTTCTGCGGGAGACCTAGCTGCCGTTATTG
GCACCTGCCCAAGCAAAAAGGACAGCGACACATGCGGCATCAGCGGGCAG
CCCTTGGGACGATCTAACCCCAAGCACTTTTGTCTGAGTTGCGGTGGCGC
CTTTGCCTTGGAATATTGCTCTGACGAAGTCCCGCTTCTACATTTCAAGT
ACCAGCAGGCTGTGCGTGTCTGTCGCAACTGCTTATTGGCTCAGTATTTT
TTGAACCACCTCAAGCTGCTGAATGCCACGTTGCGCACTCACCTACACGA
GCTGGAGCTAGAGGGTTGTTCGGTGGCCGACAAAAACTCGGCTAAAATTC
GCGTTTTTCGACAATCCTCCCCCGAGGTCGTTCTAGCATGGCAGTTGTAC
GAAGGGGGGCAGATCGATGCTGCGGAATTTACCGAGTTACTCAAGGCGGA
CGCTCGTTTGAAGGACGAGCGGCAAAATGGGATGCTGGCCGAATTTCAGA
CAAAATTGGCGCAGCCTGGGGTGGGGGACGATGCAATTAAATTGCTGCGG
TTTTTGTTTGATTTGCGTGATGAAGGACAGCCGGTCAAGTACGCCTTAGT
CTTGCAGCGGCTCTTGGCCATCGCGCAGACGGATTTGGCGGCGGTTGATT
TTGTCTTACCCCAGCTGCTGCAGGTGTATGTGCTCATGTCGGACCGGGGA
GGAGTAGAGCAGGTACTGCAACTGGAGGCGCTGGAAGACTTTCTTGTTAA
GATATGCTGCATGTCCACGGCTCAGATTCCTCTGAGAGTGGTCTGGTCCA
TGATGGGCTACTATGAAGACACGCTGCAACCGAACGCCCCTGCCTCGCTC
ACGGCGAGGAGGGGCCGTATCATCCGATTAACCCTGCATGTTGAGGCAGC
TGTGCGGGGAGACGTCCACTGCTTTAGCGAGGAGATCTTGAGCATCTTTA
GCTTTGCAGCACCAGTTCAACTTGCTTTGTTGCGGCGAGAATGGTCCCTG
GTGCAAGAGTGCCGGCAGCATCCACTGTTAAGGCCCTTTCCGCCGATGAC
GGCTTTCAGGAAGATGCATGGAGAGATTGGCGACGATCCCAAGGTTGCCT
CTCTGGCTATTGCCGAGACCTTGCGGGCATATGATCGATCTTATTCGGCG
CGGGCGAGGGAGATGGGTCACCATGGCGGGAGTCGGGCCATGTTTTCCAC
CACCAGCGCCGGTGATGGTAGGGGGGCCGGGAAGGAGAACGAAAAGGAGG
AGGCGGGGTTGATATCGTTTACGACGCAGATGAATTTTGTGAAAGAGCTG
ACGGATGCAGCAGAGAGCTTGAGGCATATCGATCCGAGTCTGCGCCGGGA
GACGTTGAGGGCGACCTTGCAGAGGATTCAGAATGAATACCATGGTGTGT
ATTTTCCCATTACGCGTGACTTCGGGAGCATGCCGAGGATTATCCGGGTG
TGTGCGGATGAAGGAGCTGTCTTCAGGAGCAAAGCCCGCGTACCTGTCCT
TATTTGTTTTGAGGTAATTCGACCCACACCGAAAGAAGCAAGCGGGCATC
ATCAACAACGGTCAGGGTCGGCTGCGACCTACATATCGGAGCAGGAGGCA
GAGAATCTACTGGACAAGAGCTCTTTGCACGAACGAATGATCAGCTTGGG
GTTGAGTGGTAATGGTAATGGTAGCGCCGGTGGAGGGGGGGCAGGAGCTG
ATGTTGGCGAGATGGCATCAGGAGCAGCAGAAGCAACACCAACAACTACG
ACTACAACATACGCCCAGGAAGAGCGAAGGCGGACTTTCTCATTGGCGGG
TAACGCGGCCTTAGCAGGCGGGCAAGGAGGCTTGATGCCTTCCTCCGCTG
CTGCTGCCGGCATGGTCATCCAACGATATGCCAGTAAGTCGGAGGTTCTG
CAGATGGTGCAGACGAGAAGGAGAAGAACAGGAGGCGTGCGAGCGGATGC
TGCAGGATCTCCAATTACCGAGGTCAGTGTGCATTCCCCACGCAACGGAA
GGCGGGCAGCTCCCTCCTCCTCCTCCTCCTGCTCCTCCTCCCCCTTGCCA
TCCTCATCGTCTGCAGCGGCAGTGAACTTGGCCCAACTCATTCAGCTGTA
CGAGCAGAGCTGCGCTTGGAAAGAGACTGCTGATAGAAGCGTCGGTGGAG
AAGAGAGAGGCAACATGAGTGCAGGGCAGAGCGTCGAAGATTCAACGGCG
GCAGCGGCCATAAACATCCCATCAGCGGTAGCGACCGCTATTGAAGAATT
CAAGAAGGGGAACTTAAGCGAGGCTGAGTTGGAGATGTTGGTGGCTAATG
ACCAACGCTTTCGACAAAATATTCTGGATAATTCTTATTTGGACGTTCAA
TTCCATGTCTCTATGGCTTTTGGGGAGTCGTGGGCGACGAAGCGGGCACG
GATTAAGGCGGCTAGTCCCGACGGGCGGCGACCAGGGTGGGATTTGTTGA
GTATGATTGTCAAGAGCAACGATGATTTGCGGCAAGAGGAGTGCATGGTC
CAGCTTATTGAGCTGTGTCAGGATATTTTCGTGGAGGCGGGGTTGGATTT
GTGGTTGGAGCCGTATGGCATTATATCTACGACAAGCTCCACGGGTTTGA
TTCAAACCTTGACTGATGCGTTAAGCCTGGATGCGCTCAAGAAGAAGGAT
GGATATGTGAGCCTAGCCCACCATTTCCAGGCAACTTATGGCCACGATGC
CGCTCGGCTGACGCAGGCCAAACGCTCATTTATAACCTCTCTCGCTGCCT
ATTCGCTTGTATGCTATGTGTTTCAGATTAAGGACCGGCACAATGGGAAC
ATCCTCCTAGACACAGAGGGTCATTTGGCGCATATTGACTATGGCTTCAT
CCTTGGCATTGCTCCCGGAGGCTCCTTCTCTATCGAGACTGCTCCCTTCA
AATTGACCCCCGAAATGGTGGATGTCATGGGCGGGTTGGACGGACCGCTT
TTCGACGAGTTCGCCGCTCTCTTTGCCGGCGGCTTCTTCGCGCTCCAGCT
TAACATGGAACGCATCGTTGCCCTGGTGGAGATCATGGCCGAACAATCCC
GCTACCCCTGCTTCCAAGCCACCGATAAGGCTGTCATCCTCCAGCGCTTG
CGCGCTCGGCTTCTGTCAGGAGGGCGCGCGCCCAGCTCCAAGGTAGACAC
GGTGGCGTTCGCTCTGGACCTAATCACACAGAGCTACAATTCCCTTACTA
CACTCCAGTATGAGAGATACCAGAACTTTACCAATGGCGTGGCCATCTAA
AGTCCGCAAGCTGGTCATGGATGCTGCGAGAACGTGTGTATGAATGAGTG
TGGGGGGAAAATAACAAAAAAGAAAATGTGCAGCAGATTGGAGTACTCAA
CCAAATTTTTGCTAGTAAAAAAGTAGACTAAAGAACAACTAAACTTTAAC

protein sequence of jgi.p|Nanoce1779_2|586170

>mRNA_4020-protein ID=mRNA_4020-protein|Name=jgi.p|Nanoce1779_2|586170|organism=Nannochloropsis oceanica|type=polypeptide|length=1329bp
MSSTRQGYLWKRQISGGGSPPAVQRVFCVLAGTTLWDYDSEDEAALGQRP
RSEVNVIGVSPWDGRARYQNYAFGFLFLSAQGTTYHAVAQSKEDLEHWLS
AIRLGLQVRFGIMGSTGGADIDDEEEDEEKVDEEGEKEVNEVEGEESECS
LFLQDEAQGRALEDGGDKHTITARCASASTAPRGNNKGSMNEGSMNPPSA
VLTWKSPSTQSTRSVTPTSTKTNSDPSRRENWHFPASSSASSSSSSPVSS
SHSSAGDLAAVIGTCPSKKDSDTCGISGQPLGRSNPKHFCLSCGGAFALE
YCSDEVPLLHFKYQQAVRVCRNCLLAQYFLNHLKLLNATLRTHLHELELE
GCSVADKNSAKIRVFRQSSPEVVLAWQLYEGGQIDAAEFTELLKADARLK
DERQNGMLAEFQTKLAQPGVGDDAIKLLRFLFDLRDEGQPVKYALVLQRL
LAIAQTDLAAVDFVLPQLLQVYVLMSDRGGVEQVLQLEALEDFLVKICCM
STAQIPLRVVWSMMGYYEDTLQPNAPASLTARRGRIIRLTLHVEAAVRGD
VHCFSEEILSIFSFAAPVQLALLRREWSLVQECRQHPLLRPFPPMTAFRK
MHGEIGDDPKVASLAIAETLRAYDRSYSARAREMGHHGGSRAMFSTTSAG
DGRGAGKENEKEEAGLISFTTQMNFVKELTDAAESLRHIDPSLRRETLRA
TLQRIQNEYHGVYFPITRDFGSMPRIIRVCADEGAVFRSKARVPVLICFE
VIRPTPKEASGHHQQRSGSAATYISEQEAENLLDKSSLHERMISLGLSGN
GNGSAGGGGAGADVGEMASGAAEATPTTTTTTYAQEERRRTFSLAGNAAL
AGGQGGLMPSSAAAAGMVIQRYASKSEVLQMVQTRRRRTGGVRADAAGSP
ITEVSVHSPRNGRRAAPSSSSSCSSSPLPSSSSAAAVNLAQLIQLYEQSC
AWKETADRSVGGEERGNMSAGQSVEDSTAAAAINIPSAVATAIEEFKKGN
LSEAELEMLVANDQRFRQNILDNSYLDVQFHVSMAFGESWATKRARIKAA
SPDGRRPGWDLLSMIVKSNDDLRQEECMVQLIELCQDIFVEAGLDLWLEP
YGIISTTSSTGLIQTLTDALSLDALKKKDGYVSLAHHFQATYGHDAARLT
QAKRSFITSLAAYSLVCYVFQIKDRHNGNILLDTEGHLAHIDYGFILGIA
PGGSFSIETAPFKLTPEMVDVMGGLDGPLFDEFAALFAGGFFALQLNMER
IVALVEIMAEQSRYPCFQATDKAVILQRLRARLLSGGRAPSSKVDTVAFA
LDLITQSYNSLTTLQYERYQNFTNGVAI*

mRNA from alignment at scaffold_8:649418..653667-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4020 ID=mRNA_4020|Name=jgi.p|Nanoce1779_2|586170|organism=Nannochloropsis oceanica|type=mRNA|length=4250bp|location=Sequence derived from alignment at scaffold_8:649418..653667- (Nannochloropsis oceanica)
AACAGAGCACCAACCCCCTGACGCCATCGTCATCAGCACAGCCTGGCAAA
ACATCATGGCCAACAGCAGTGGGAGGGGCAGTAGAAGAAGACGTTTCTAA
GCAGCATACAACCATGTCCTCGACCCGGCAAGGTTACCTATGGAAGCGCC
AAATCAGCGGAGGCGGGAGCCCACCAGCGGTGCAGCGGGTGTTTTGTGTC
TTGGCTGGCACCACGCTCTGGGACTACGACTCGGAGGATGAGGCGGCCTT
GGGGCAACGACCGAGGTCCGAAGTGAACGTGATTGGCGTGTCGCCCTGGG
ACGGTCGGGCGCGGTATCAGAACTACGCGTTTGGGTTCCTTTTCTTGTCG
GCGCAGGGCACGACGTATCATGCGGTGGCGCAGAGCAAGGAGGACCTGGA
GCACTGGCTGTCTGCCATACGCCTGGGCCTGCAGGTCCGGTTTGGCATCA
TGGGGTCAACGGGCGGCGCGGATATTGACGACGAGGAAGAAGATGAGGAA
AAGGTAGACGAGGAGGGAGAAAAGGAGGTGAATGAGGTGGAAGGGGAGGA
GAGTGAATGCAGTCTTTTTCTGCAGGACGAGGCCCAAGGGAGGGCTTTGG
AGGATGGAGGTGATAAACACACCATCACAGCAAGATGCGCGTCCGCATCA
ACCGCCCCAAGAGGAAATAATAAGGGCAGCATGAACGAGGGCAGCATGAA
CCCACCATCGGCAGTACTGACGTGGAAATCACCATCAACACAAAGCACAA
GGAGCGTCACGCCCACATCCACCAAGACCAACTCGGACCCGAGCAGGAGG
GAAAATTGGCACTTTCCCGCTTCTTCCTCCGCTTCCTCGTCCTCCTCTTC
TCCCGTCTCCTCTTCACATAGTTCTGCGGGAGACCTAGCTGCCGTTATTG
GCACCTGCCCAAGCAAAAAGGACAGCGACACATGCGGCATCAGCGGGCAG
CCCTTGGGACGATCTAACCCCAAGCACTTTTGTCTGAGTTGCGGTGGCGC
CTTTGCCTTGGAATATTGCTCTGACGAAGTCCCGCTTCTACATTTCAAGT
ACCAGCAGGCTGTGCGTGTCTGTCGCAACTGCTTATTGGCTCAGTATTTT
TTGAACCACCTCAAGCTGCTGAATGCCACGTTGCGCACTCACCTACACGA
GCTGGAGCTAGAGGGTTGTTCGGTGGCCGACAAAAACTCGGCTAAAATTC
GCGTTTTTCGACAATCCTCCCCCGAGGTCGTTCTAGCATGGCAGTTGTAC
GAAGGGGGGCAGATCGATGCTGCGGAATTTACCGAGTTACTCAAGGCGGA
CGCTCGTTTGAAGGACGAGCGGCAAAATGGGATGCTGGCCGAATTTCAGA
CAAAATTGGCGCAGCCTGGGGTGGGGGACGATGCAATTAAATTGCTGCGG
TTTTTGTTTGATTTGCGTGATGAAGGACAGCCGGTCAAGTACGCCTTAGT
CTTGCAGCGGCTCTTGGCCATCGCGCAGACGGATTTGGCGGCGGTTGATT
TTGTCTTACCCCAGCTGCTGCAGGTGTATGTGCTCATGTCGGACCGGGGA
GGAGTAGAGCAGGTACTGCAACTGGAGGCGCTGGAAGACTTTCTTGTTAA
GATATGCTGCATGTCCACGGCTCAGATTCCTCTGAGAGTGGTCTGGTCCA
TGATGGGCTACTATGAAGACACGCTGCAACCGAACGCCCCTGCCTCGCTC
ACGGCGAGGAGGGGCCGTATCATCCGATTAACCCTGCATGTTGAGGCAGC
TGTGCGGGGAGACGTCCACTGCTTTAGCGAGGAGATCTTGAGCATCTTTA
GCTTTGCAGCACCAGTTCAACTTGCTTTGTTGCGGCGAGAATGGTCCCTG
GTGCAAGAGTGCCGGCAGCATCCACTGTTAAGGCCCTTTCCGCCGATGAC
GGCTTTCAGGAAGATGCATGGAGAGATTGGCGACGATCCCAAGGTTGCCT
CTCTGGCTATTGCCGAGACCTTGCGGGCATATGATCGATCTTATTCGGCG
CGGGCGAGGGAGATGGGTCACCATGGCGGGAGTCGGGCCATGTTTTCCAC
CACCAGCGCCGGTGATGGTAGGGGGGCCGGGAAGGAGAACGAAAAGGAGG
AGGCGGGGTTGATATCGTTTACGACGCAGATGAATTTTGTGAAAGAGCTG
ACGGATGCAGCAGAGAGCTTGAGGCATATCGATCCGAGTCTGCGCCGGGA
GACGTTGAGGGCGACCTTGCAGAGGATTCAGAATGAATACCATGGTGTGT
ATTTTCCCATTACGCGTGACTTCGGGAGCATGCCGAGGATTATCCGGGTG
TGTGCGGATGAAGGAGCTGTCTTCAGGAGCAAAGCCCGCGTACCTGTCCT
TATTTGTTTTGAGGTAATTCGACCCACACCGAAAGAAGCAAGCGGGCATC
ATCAACAACGGTCAGGGTCGGCTGCGACCTACATATCGGAGCAGGAGGCA
GAGAATCTACTGGACAAGAGCTCTTTGCACGAACGAATGATCAGCTTGGG
GTTGAGTGGTAATGGTAATGGTAGCGCCGGTGGAGGGGGGGCAGGAGCTG
ATGTTGGCGAGATGGCATCAGGAGCAGCAGAAGCAACACCAACAACTACG
ACTACAACATACGCCCAGGAAGAGCGAAGGCGGACTTTCTCATTGGCGGG
TAACGCGGCCTTAGCAGGCGGGCAAGGAGGCTTGATGCCTTCCTCCGCTG
CTGCTGCCGGCATGGTCATCCAACGATATGCCAGTAAGTCGGAGGTTCTG
CAGATGGTGCAGACGAGAAGGAGAAGAACAGGAGGCGTGCGAGCGGATGC
TGCAGGATCTCCAATTACCGAGGTCAGTGTGCATTCCCCACGCAACGGAA
GGCGGGCAGCTCCCTCCTCCTCCTCCTCCTGCTCCTCCTCCCCCTTGCCA
TCCTCATCGTCTGCAGCGGCAGTGAACTTGGCCCAACTCATTCAGCTGTA
CGAGCAGAGCTGCGCTTGGAAAGAGACTGCTGATAGAAGCGTCGGTGGAG
AAGAGAGAGGCAACATGAGTGCAGGGCAGAGCGTCGAAGATTCAACGGCG
GCAGCGGCCATAAACATCCCATCAGCGGTAGCGACCGCTATTGAAGAATT
CAAGAAGGGGAACTTAAGCGAGGCTGAGTTGGAGATGTTGGTGGCTAATG
ACCAACGCTTTCGACAAAATATTCTGGATAATTCTTATTTGGACGTTCAA
TTCCATGTCTCTATGGCTTTTGGGGAGTCGTGGGCGACGAAGCGGGCACG
GATTAAGGCGGCTAGTCCCGACGGGCGGCGACCAGGGTGGGATTTGTTGA
GTATGATTGTCAAGAGCAACGATGATTTGCGGCAAGAGGAGTGCATGGTC
CAGCTTATTGAGCTGTGTCAGGATATTTTCGTGGAGGCGGGGTTGGATTT
GTGGTTGGAGCCGTATGGCATTATATCTACGACAAGCTCCACGGGTTTGA
TTCAAACCTTGACTGATGCGTTAAGCCTGGATGCGCTCAAGAAGAAGGAT
GGATATGTGAGCCTAGCCCACCATTTCCAGGCAACTTATGGCCACGATGC
CGCTCGGCTGACGCAGGCCAAACGCTCATTTATAACCTCTCTCGCTGCCT
ATTCGCTTGTATGCTATGTGTTTCAGATTAAGGACCGGCACAATGGGAAC
ATCCTCCTAGACACAGAGGGTCATTTGGCGCATATTGACTATGGCTTCAT
CCTTGGCATTGCTCCCGGAGGCTCCTTCTCTATCGAGACTGCTCCCTTCA
AATTGACCCCCGAAATGGTGGATGTCATGGGCGGGTTGGACGGACCGCTT
TTCGACGAGTTCGCCGCTCTCTTTGCCGGCGGCTTCTTCGCGCTCCAGCT
TAACATGGAACGCATCGTTGCCCTGGTGGAGATCATGGCCGAACAATCCC
GCTACCCCTGCTTCCAAGCCACCGATAAGGCTGTCATCCTCCAGCGCTTG
CGCGCTCGGCTTCTGTCAGGAGGGCGCGCGCCCAGCTCCAAGGTAGACAC
GGTGGCGTTCGCTCTGGACCTAATCACACAGAGCTACAATTCCCTTACTA
CACTCCAGTATGAGAGATACCAGAACTTTACCAATGGCGTGGCCATCTAA
AGTCCGCAAGCTGGTCATGGATGCTGCGAGAACGTGTGTATGAATGAGTG
TGGGGGGAAAATAACAAAAAAGAAAATGTGCAGCAGATTGGAGTACTCAA
CCAAATTTTTGCTAGTAAAAAAGTAGACTAAAGAACAACTAAACTTTAAC

Coding sequence (CDS) from alignment at scaffold_8:649418..653667-

>mRNA_4020 ID=mRNA_4020|Name=jgi.p|Nanoce1779_2|586170|organism=Nannochloropsis oceanica|type=CDS|length=3987bp|location=Sequence derived from alignment at scaffold_8:649418..653667- (Nannochloropsis oceanica)
ATGTCCTCGACCCGGCAAGGTTACCTATGGAAGCGCCAAATCAGCGGAGG
CGGGAGCCCACCAGCGGTGCAGCGGGTGTTTTGTGTCTTGGCTGGCACCA
CGCTCTGGGACTACGACTCGGAGGATGAGGCGGCCTTGGGGCAACGACCG
AGGTCCGAAGTGAACGTGATTGGCGTGTCGCCCTGGGACGGTCGGGCGCG
GTATCAGAACTACGCGTTTGGGTTCCTTTTCTTGTCGGCGCAGGGCACGA
CGTATCATGCGGTGGCGCAGAGCAAGGAGGACCTGGAGCACTGGCTGTCT
GCCATACGCCTGGGCCTGCAGGTCCGGTTTGGCATCATGGGGTCAACGGG
CGGCGCGGATATTGACGACGAGGAAGAAGATGAGGAAAAGGTAGACGAGG
AGGGAGAAAAGGAGGTGAATGAGGTGGAAGGGGAGGAGAGTGAATGCAGT
CTTTTTCTGCAGGACGAGGCCCAAGGGAGGGCTTTGGAGGATGGAGGTGA
TAAACACACCATCACAGCAAGATGCGCGTCCGCATCAACCGCCCCAAGAG
GAAATAATAAGGGCAGCATGAACGAGGGCAGCATGAACCCACCATCGGCA
GTACTGACGTGGAAATCACCATCAACACAAAGCACAAGGAGCGTCACGCC
CACATCCACCAAGACCAACTCGGACCCGAGCAGGAGGGAAAATTGGCACT
TTCCCGCTTCTTCCTCCGCTTCCTCGTCCTCCTCTTCTCCCGTCTCCTCT
TCACATAGTTCTGCGGGAGACCTAGCTGCCGTTATTGGCACCTGCCCAAG
CAAAAAGGACAGCGACACATGCGGCATCAGCGGGCAGCCCTTGGGACGAT
CTAACCCCAAGCACTTTTGTCTGAGTTGCGGTGGCGCCTTTGCCTTGGAA
TATTGCTCTGACGAAGTCCCGCTTCTACATTTCAAGTACCAGCAGGCTGT
GCGTGTCTGTCGCAACTGCTTATTGGCTCAGTATTTTTTGAACCACCTCA
AGCTGCTGAATGCCACGTTGCGCACTCACCTACACGAGCTGGAGCTAGAG
GGTTGTTCGGTGGCCGACAAAAACTCGGCTAAAATTCGCGTTTTTCGACA
ATCCTCCCCCGAGGTCGTTCTAGCATGGCAGTTGTACGAAGGGGGGCAGA
TCGATGCTGCGGAATTTACCGAGTTACTCAAGGCGGACGCTCGTTTGAAG
GACGAGCGGCAAAATGGGATGCTGGCCGAATTTCAGACAAAATTGGCGCA
GCCTGGGGTGGGGGACGATGCAATTAAATTGCTGCGGTTTTTGTTTGATT
TGCGTGATGAAGGACAGCCGGTCAAGTACGCCTTAGTCTTGCAGCGGCTC
TTGGCCATCGCGCAGACGGATTTGGCGGCGGTTGATTTTGTCTTACCCCA
GCTGCTGCAGGTGTATGTGCTCATGTCGGACCGGGGAGGAGTAGAGCAGG
TACTGCAACTGGAGGCGCTGGAAGACTTTCTTGTTAAGATATGCTGCATG
TCCACGGCTCAGATTCCTCTGAGAGTGGTCTGGTCCATGATGGGCTACTA
TGAAGACACGCTGCAACCGAACGCCCCTGCCTCGCTCACGGCGAGGAGGG
GCCGTATCATCCGATTAACCCTGCATGTTGAGGCAGCTGTGCGGGGAGAC
GTCCACTGCTTTAGCGAGGAGATCTTGAGCATCTTTAGCTTTGCAGCACC
AGTTCAACTTGCTTTGTTGCGGCGAGAATGGTCCCTGGTGCAAGAGTGCC
GGCAGCATCCACTGTTAAGGCCCTTTCCGCCGATGACGGCTTTCAGGAAG
ATGCATGGAGAGATTGGCGACGATCCCAAGGTTGCCTCTCTGGCTATTGC
CGAGACCTTGCGGGCATATGATCGATCTTATTCGGCGCGGGCGAGGGAGA
TGGGTCACCATGGCGGGAGTCGGGCCATGTTTTCCACCACCAGCGCCGGT
GATGGTAGGGGGGCCGGGAAGGAGAACGAAAAGGAGGAGGCGGGGTTGAT
ATCGTTTACGACGCAGATGAATTTTGTGAAAGAGCTGACGGATGCAGCAG
AGAGCTTGAGGCATATCGATCCGAGTCTGCGCCGGGAGACGTTGAGGGCG
ACCTTGCAGAGGATTCAGAATGAATACCATGGTGTGTATTTTCCCATTAC
GCGTGACTTCGGGAGCATGCCGAGGATTATCCGGGTGTGTGCGGATGAAG
GAGCTGTCTTCAGGAGCAAAGCCCGCGTACCTGTCCTTATTTGTTTTGAG
GTAATTCGACCCACACCGAAAGAAGCAAGCGGGCATCATCAACAACGGTC
AGGGTCGGCTGCGACCTACATATCGGAGCAGGAGGCAGAGAATCTACTGG
ACAAGAGCTCTTTGCACGAACGAATGATCAGCTTGGGGTTGAGTGGTAAT
GGTAATGGTAGCGCCGGTGGAGGGGGGGCAGGAGCTGATGTTGGCGAGAT
GGCATCAGGAGCAGCAGAAGCAACACCAACAACTACGACTACAACATACG
CCCAGGAAGAGCGAAGGCGGACTTTCTCATTGGCGGGTAACGCGGCCTTA
GCAGGCGGGCAAGGAGGCTTGATGCCTTCCTCCGCTGCTGCTGCCGGCAT
GGTCATCCAACGATATGCCAGTAAGTCGGAGGTTCTGCAGATGGTGCAGA
CGAGAAGGAGAAGAACAGGAGGCGTGCGAGCGGATGCTGCAGGATCTCCA
ATTACCGAGGTCAGTGTGCATTCCCCACGCAACGGAAGGCGGGCAGCTCC
CTCCTCCTCCTCCTCCTGCTCCTCCTCCCCCTTGCCATCCTCATCGTCTG
CAGCGGCAGTGAACTTGGCCCAACTCATTCAGCTGTACGAGCAGAGCTGC
GCTTGGAAAGAGACTGCTGATAGAAGCGTCGGTGGAGAAGAGAGAGGCAA
CATGAGTGCAGGGCAGAGCGTCGAAGATTCAACGGCGGCAGCGGCCATAA
ACATCCCATCAGCGGTAGCGACCGCTATTGAAGAATTCAAGAAGGGGAAC
TTAAGCGAGGCTGAGTTGGAGATGTTGGTGGCTAATGACCAACGCTTTCG
ACAAAATATTCTGGATAATTCTTATTTGGACGTTCAATTCCATGTCTCTA
TGGCTTTTGGGGAGTCGTGGGCGACGAAGCGGGCACGGATTAAGGCGGCT
AGTCCCGACGGGCGGCGACCAGGGTGGGATTTGTTGAGTATGATTGTCAA
GAGCAACGATGATTTGCGGCAAGAGGAGTGCATGGTCCAGCTTATTGAGC
TGTGTCAGGATATTTTCGTGGAGGCGGGGTTGGATTTGTGGTTGGAGCCG
TATGGCATTATATCTACGACAAGCTCCACGGGTTTGATTCAAACCTTGAC
TGATGCGTTAAGCCTGGATGCGCTCAAGAAGAAGGATGGATATGTGAGCC
TAGCCCACCATTTCCAGGCAACTTATGGCCACGATGCCGCTCGGCTGACG
CAGGCCAAACGCTCATTTATAACCTCTCTCGCTGCCTATTCGCTTGTATG
CTATGTGTTTCAGATTAAGGACCGGCACAATGGGAACATCCTCCTAGACA
CAGAGGGTCATTTGGCGCATATTGACTATGGCTTCATCCTTGGCATTGCT
CCCGGAGGCTCCTTCTCTATCGAGACTGCTCCCTTCAAATTGACCCCCGA
AATGGTGGATGTCATGGGCGGGTTGGACGGACCGCTTTTCGACGAGTTCG
CCGCTCTCTTTGCCGGCGGCTTCTTCGCGCTCCAGCTTAACATGGAACGC
ATCGTTGCCCTGGTGGAGATCATGGCCGAACAATCCCGCTACCCCTGCTT
CCAAGCCACCGATAAGGCTGTCATCCTCCAGCGCTTGCGCGCTCGGCTTC
TGTCAGGAGGGCGCGCGCCCAGCTCCAAGGTAGACACGGTGGCGTTCGCT
CTGGACCTAATCACACAGAGCTACAATTCCCTTACTACACTCCAGTATGA
GAGATACCAGAACTTTACCAATGGCGTGGCCATCTAA

Synonyms

Publications