jgi.p|Nanoce1779_2|629673, mRNA_3989 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|629673
Unique Name	mRNA_3989
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4897
Alignment location	scaffold_8:568367..574021 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	629759
Track	FilteredModels2
ProteinId	629673

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_8	supercontig	scaffold_8:568367..574021 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|629673	gene_3989	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|629673	mRNA_3989-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3989	CDS_3989	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_8:568367..574021+
coding sequence from alignment at scaffold_8:568367..574021+

mRNA sequence

>mRNA_3989 ID=mRNA_3989|Name=jgi.p|Nanoce1779_2|629673|organism=Nannochloropsis oceanica|type=mRNA|length=4897bp
CTCGTATGCTGATTCCATAATTGGATAGGCAAGGATCTATGGTTATATGT
ATAATTGTTGCGGGGACTAGCCAGTTAGCTGTAGCTATGACGATTTGATT
GGGTTCTGTGCTTTGTTCGCTGCACTTGTGCCAGGCAAGTTGGGGCACTG
AGACAAGAGTATTTTAACATGTGAGTCCTCCCAAAGTAAGAGGATGGCAC
ACATAATATACCCTAAATTGGATTTGCTCCCCTGCGAGTTTATTCGAGGA
AATCTGTGGGGTTTTAACCGGGACATCTGGACCTTGAAGCTTAAGCGGGT
CTTCTCGCTCTCTCCTTCCCGAAAGATGATTTCTCAAGGAGATTTATTGT
GACATGTACACCTTCCCTTCCAGATTCAAAATAATGTGTACAGATTGGGA
GTACTTGAGCAGTAGAATGCAGCAATGCAATGGTTGGCAATAATTACGGA
AATATTCACGTTCTAAGCAGAGGAGATTCCGACCGAGGCTTCGCCAAAAG
GGAGGAGGGGGTGCGTCAACTCCCGACGTGTTCCCTCGCGTTGTCGCGCA
ACCCCGCTTTCGACTGCGTCCGTCCATCTTCCCACATACCACTGACTGCC
GATACTTGTGTACACATTGCACACATTATCGAAGCCTTACTCACACATAT
CCTTATTTGCACGTACATGGACGACATGTAGAAGCATGCGTCCCTACTCG
ACTGCGGCGTTCCTCGCCGTCGTCCTACTCGCAGAGGGAATAGATGCCCA
AAAATTGCGAAGCACAGGTGGAAAGGGTATGGTGGGTGTGGAAATGACGG
CTCAGAGAACTGGCAGTGTAAAAATGGTGCCTGGGAATGGCAAGGCGGCC
GAGGGTGCGGGCGAGAAGCGACAGTATCGAGGTGTGAACCTGGGCGGCTG
GCTGCTAATTGAGTCCTGGATGTATCCGAATTTTTACAAGACCCTTGGAA
TCGAGACATGGTTGGGGGAGATGCAGGTTGTCGATGCCCTTGGGGGCAAG
GAGAAGGCTAGGCCCTTTTTGGAGGAGCACTGGGATACATGGGTTACCAA
ACAAGATTTACAGAATCTGAAGGACGGAGGTATAACCCATATCCGTATCC
CAATTGGTTATTGGATTTTGGGGGAAGAATTCTTGAAGCCTGGTGAGACG
TACCTGCCCGGGGCGTGGCCTTATTTATTGCGGTCCCTGAAGTGGTGTAA
GGAGTTGGGATTGAAGGCCATTGTTGACCTTCACGGCGCGCCGGGAGTGC
AGAACGGTCACGACAACGGCGGCTTTGAGGGCGGTAACGAGTCGATCATG
TGGGGCGAGCCGGAGAACCAAAAGCGGACCACTGACGTCCTGGTGTACCT
GGCCAAGAATCTTACCGTCGTCAATGCCACTGCTGGTTATGAAGGTTCAT
TGCAAGGCCTTTGCCTGCTGAATGAACCGTGGACTACGACCGTGGGGGGG
CCCCTGAGCATGCAGCTTGTCAAGGACTGGGTGCAGGAGGCGACGGACGC
TGTGCTTGCTGCGGGCTGGAAGGGGGATATTTGGTTTCCTGATGGCTTTG
ATCTTACTTGGAAGGGATGGGAGGGCTTCCTCCAACCCCCCCAGTACCAC
AATATCTACGCCGACTCCCATCTCTACATGCTCTTCGACCCGGCCCTGTG
GAAGTTAGGCGCTAAGGCGCAAACCAACAATATCTGCCAAGGGTACACCA
CCACGCAATTGGAGAAGGTGAAGGGGAAGATCGCCTCGGGTGTAGTGATT
GGAGAGTATTCTCTTGACTTTTTGACGTTCCCTGATTTCCCCTACGACGC
GGAGACGGAGAAGAATCTGCAAAATCTGCTATTGGCCGAGCAGAAGATGT
ATGGAGTGATCGGTAATGCTGATAATGCTGCCGTCGGTGCCTTCTTTTGG
TCGTTCAAATCTCTGGGGCGTGTCAAGGATGATCTGACAAAGTTGGAGGA
TAACCCTCACTCGCCCTGGTCCTACCTGTCTTTGCTTAAAGACGGTATTG
CCTCCAAAGACCTTGCCAAGGCCGAATTCAATTGTACGGCTTTCATCGCG
GGGTATGCCAACCAGCCCCCTCCTGCGGCTACGCCGGGTGTGACCACGGC
TGGTGGGCCCTCGGGTGGCGCGGTACAGTAGGGCGCTAGTTGGTCCAGGC
AGCAGGAGCAGTGGTTTGGAGAGACATGCTCTTCAAGCGATCGATTTACT
TGTTCGTTTCATAACATTTATTCTTAATTCACTCATTCATTTATTAATTC
TTCTGGAGAGTTGGGGATTAGAGTAAGATTAAGGAACTGACGATGGGAGG
GGACCCGAATTGCTATCATAAAATTATCCCGTAGCTTTTAATTTTGAAGC
ATTTTGCTTTCCCTGATTTATCTTTTCAGGGAGAGATGGGCCAAGTCGGA
TGGGCCCCTCTGCCACTCTAGGTAGTGCCACGCTGCCTCTCCTCCAACCC
GTTATCTGGTGGTCTTCCATAACTCAGTCGCATCCCTCGCAACGGTAACA
GGAAACATGCCGCGCTCGGCATCGTCGCTTGTTGTGGCTCTGGCCGCCGT
GCTCTTTGCGCCACCATGCCCCTGCACCGGCTTCCTCTTGCCCACCAGTC
CTTCAACATCGCGTTCGTCATCGTCCTCCAGCAGCAGCAGCAGCAGCGCA
CCGCGACTCACAGTCCCCTCAACACCACAAATCACCACCACTACACCGCA
TTCAAGCTCAATCGACGGGGGACGAGGGGACAGCAAAGTAAAGCCATTGG
ATTGGCTGGAAGAGGTGCGGCGGAAGAACTACGAGGTGCAGCAGCTACAA
GAGACGGAGGAAGGGGCGCGGCTGCGGAATCGCTTGAGTCGCATGAGCTT
GGAAGGCGGGTATCGTGTGGCACGGGCCATAAAGCGCAGCGCCAAGGACC
AAGTCCATTTGATGAGCGTGGTGGCGGAGATCAAGCGCCGAACACCAACG
GGCGCAGAGACTCCGACTGAGGTTGCTGCCATTTCCGACGTGGGGTTGAT
TGCTCGACAGGTAGGGAGAGGAATATTCAGGAAGGGATGACAAGCAAAGG
ATGACGAGCGGAGCATATTTGACACATTCTCTCCTTCCTTATACATGTGC
AGCTTGCTGATTGCGGTGCCGACGTCCTCCTTGTGACGACAGACGAGATA
TGTTACGGAGGCTCAGTGGAGGACCTACGAGCCGTCAAGGCAGCTTTTGC
CGATGTACCAGAGGGTGACAGGCCGCCCATCGTAGCTAAGGACATATACA
TCCACCCACTACAAATCGCCCAGGCCATTGACGCGGGGGCAGATGGCGTA
CTCCTTATGGCTAGTTTGGTACGTTGGGTGGATTAATGCTATCAAAGAGC
AAGCAAAGGCCTGCGCGCATGCATCCTCAGCCGTCATGTGAGCTTGATGG
CGTGAACTCTTCCTCTGAGCAATCCTAAACAAACATAAACGATGTCAAAA
CACCCTCAAGACGCCCTCCTCCACCATACAAAACCCATAAACTCACAGAT
GGGCGCCTCCCTTAACGAGCTCCTGGACGCCTGCACCTGCCTCGGTACCG
AAGCCCTTGTTGAGGTCCACACAGTCGCCGAGCTCGAAAAGGCCCTTGAA
CTAGGCGCCACCAACATCGTCGCCACCAACTGGGATCGGATCGAGAATGT
GCTCTACCCCAATCAAGCGAAAGGGCTCAAAGGGCTTATTCCTGATCTGA
TCGTGGCCATTGGCGCCGGTGGGGTGGGAACAGTTCAGGATGCCGCAGAA
CTAGCGGACATGGGCTACGATGCTGCTGTATTGGGAAGGGGTTTGGCTTC
CTCGGCGGATATTGAACGGCTGATTTCGACGATCCGGTCGAGGGAGTCCT
TGCCCAATTTGTTGACCGGCGCGGGGATGATGGCGGAGGAGCTAAAGCGA
GGGGAAGGCGACTAATGGGCAGGGTAAAATCCAAACATTTCGAAATTAAA
ACAGATATAGCATGGCCAATGTAGAAATAAAAAGAAACATGACAAAGCAA
GACTACGTGCTTTGGTGCAAAGCCGAGATAATTAAAACAATGTGCGTTCC
GATCTTCTGCTTTTGGGAATTTGGCGAGGAAATGATCGCGATTGAAGTGC
GGCTTGGACCTCGGACCAAGCTCTGTCAAGTGGCGTCTGCAAGGCCAACC
ATGCGAAGCTACGCGGTGCTTTCCCTCACCATGATGCCCTTCGCCACGAC
AAGGGCATTTGTTTTACCTCGATACAGCCCTCGTCTCGAGCAGCTGTTGG
TCCGCAGGTACGTCGTGTGCTCGTCGCCTTGCACATTTATATGGGGCATG
TCCCGCGCATGCATTATGTTCAGTCCCTAATTTGACGTGTCACAAATGCT
TGTATGGTCGTCTCAATCTTGTAGACGACCAAATATCTTCGCATTTTTCA
CCTTGCAAGGACCACTCATGGAACTTGACCACTCTACTCCCGTTTGCAGT
GCCACCACCATTCCGCAAACGCCAGCCGCTCCTTCCTCGACGACAAACTC
ACGTGGTCAATTCCCTTTGATCGAACCAGTTTTTGACGAAGTCTGCGAGA
TGAGCGGCGTGACTCTTACTCGATATATGATGGAAGTAAGCCGCGCCAAT
CCCCACCTCAAGGAGGTTGAGTCCTTGATGAACAGCATCCAAACGGCTTG
TAAGGTGCGTTACATGAGTGGGTTAAGGGTTGGGATGATTGCGACATCTT
TTTGATCAGCAAGCTCTGTCTTTCATGTCGTCAAATCATATTGATCCCCA
TGCCCTCACAAACACCATCGACCCACTCCATCCTCCATCACCCGCCACCC
CTCACCCCTCAAAAGACCATTTCCAGCCTGGTCAACCGCGCATGCATCAC
TAAAATGACCGGGTACCAAGACGATGGCTGCTCCATCAACGTTCAAG

protein sequence of jgi.p|Nanoce1779_2|629673

>mRNA_3989-protein ID=mRNA_3989-protein|Name=jgi.p|Nanoce1779_2|629673|organism=Nannochloropsis oceanica|type=polypeptide|length=482bp
MRPYSTAAFLAVVLLAEGIDAQKLRSTGGKGMVGVEMTAQRTGSVKMVPG
NGKAAEGAGEKRQYRGVNLGGWLLIESWMYPNFYKTLGIETWLGEMQVVD
ALGGKEKARPFLEEHWDTWVTKQDLQNLKDGGITHIRIPIGYWILGEEFL
KPGETYLPGAWPYLLRSLKWCKELGLKAIVDLHGAPGVQNGHDNGGFEGG
NESIMWGEPENQKRTTDVLVYLAKNLTVVNATAGYEGSLQGLCLLNEPWT
TTVGGPLSMQLVKDWVQEATDAVLAAGWKGDIWFPDGFDLTWKGWEGFLQ
PPQYHNIYADSHLYMLFDPALWKLGAKAQTNNICQGYTTTQLEKVKGKIA
SGVVIGEYSLDFLTFPDFPYDAETEKNLQNLLLAEQKMYGVIGNADNAAV
GAFFWSFKSLGRVKDDLTKLEDNPHSPWSYLSLLKDGIASKDLAKAEFNC
TAFIAGYANQPPPAATPGVTTAGGPSGGAVQ*

mRNA from alignment at scaffold_8:568367..574021+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3989 ID=mRNA_3989|Name=jgi.p|Nanoce1779_2|629673|organism=Nannochloropsis oceanica|type=mRNA|length=5655bp|location=Sequence derived from alignment at scaffold_8:568367..574021+ (Nannochloropsis oceanica)
CTCGTATGCTGATTCCATAATTGGATAGGCAAGGATCTATGGTTATATGT
ATAATTGTTGCGGGGACTAGCCAGTTAGCTGTAGCTATGACGATTTGATT
GGGTTCTGTGCTTTGTTCGCTGCACTTGTGCCAGGCAAGTTGGGGCACTG
AGACAAGAGTATTTTAACATGTGAGTCCTCCCAAAGTAAGAGGATGGCAC
ACATAATATACCCTAAATTGGATTTGCTCCCCTGCGAGTTTATTCGAGGA
AATCTGTGGGGTTTTAACCGGGACATCTGGACCTTGAAGCTTAAGCGGGT
CTTCTCGCTCTCTCCTTCCCGAAAGATGATTTCTCAAGGAGATTTATTGT
GACATGTACACCTTCCCTTCCAGATTCAAAATAATGTGTACAGATTGGGA
GTACTTGAGCAGTAGAATGCAGCAATGCAATGGTTGGCAATAATTACGGA
AATATTCACGTTCTAAGCAGAGGAGATTCCGACCGAGGCTTCGCCAAAAG
GGAGGAGGGGGTGCGTCAACTCCCGACGTGTTCCCTCGCGTTGTCGCGCA
ACCCCGCTTTCGACTGCGTCCGTCCATCTTCCCACATACCACTGACTGCC
GATACTTGTGTACACATTGCACACATTATCGAAGCCTTACTCACACATAT
CCTTATTTGCACGTACATGGACGACATGTAGAAGCATGCGTCCCTACTCG
ACTGCGGCGTTCCTCGCCGTCGTCCTACTCGCAGAGGGAATAGATGCCCA
AAAATTGCGAAGCACAGGTGGAAAGGGTATGGTGGGTGTGGAAATGACGG
CTCAGAGAACTGGCAGTGTAAAAATGGTGCCTGGGAATGGCAAGGCGGCC
GAGGGTGCGGGCGAGAAGCGACAGTATCGAGGTAAGGGGCCGGCAGAAGA
GAGGGCCGGTAGAAGAGGGAGGAATGCACCATGAATACTGTGCGAGGCCT
TTGACTCATTGTCCATATATTCACATTTCTCACTCATGACTGTACAGGTG
TGAACCTGGGCGGCTGGCTGGTAAGTTTTAGAACAGAAATGGGAAGTGAA
GGAGGAGAATGGGCCAGTGATATGACAATGTGGGTGGGCCATCGTTGCCC
TCGTAGCTTATCTCCCCCTCATCCTCGTTCCCCTTCCTCCTCTTCCCTCT
TCCAGCTAATTGAGTCCTGGATGTATCCGAATTTTTACAAGACCCTTGGA
ATCGAGACATGGTTGGGGGAGATGCAGGTTGTCGATGCCCTTGGGGGCAA
GGAGAAGGCTAGGCCCTTTTTGGAGGAGCACTGGGATACATGGGTTACCA
AACAAGATTTACAGAATCTGAAGGACGGAGGTATAACCCATATCCGTATC
CCAATTGGTTATTGGATTTTGGGGGAAGAATTCTTGAAGCCTGGTGAGAC
GTACCTGCCCGGGGCGTGGCCTTATTTATTGCGGTCCCTGAAGTGGTGTA
AGGAGTTGGGATTGAAGGCCATTGTTGACCTTCACGGCGCGCCGGGAGTG
CAGAACGGTGAGTACTTTTGTTCTAAGAAAAAGGAAAAATGTGTGGCGGT
GATAGATCTCTCATTGGTATGTCACCACCTATATTTCTCTGCCATTTGCT
ACAGGTCACGACAACGGCGGCTTTGAGGGCGGTAACGAGTCGATCATGTG
GGGCGAGCCGGAGAACCAAAAGCGGACCACTGACGTCCTGGTGTACCTGG
CCAAGAATCTTACCGTCGTCAATGCCACTGCTGGTTATGAAGGTTCATTG
CAAGGCCTTTGCCTGCTGAATGAACCGTGGACTACGACCGTGGGGGGGCC
CCTGAGCATGCAGCTTGTCAAGGACTGGGTGCAGGAGGCGACGGACGCTG
TGCTTGCTGCGGGCTGGAAGGGGGATATTTGGTTTCCTGATGGCTTTGAT
CTTACTTGTACGTACATGTCTGGATCATGCATTAACGGATGTGGGGTTGG
TGGCTTTGTAGGGTGATGGTGTTTGGCATGCATGCTATGTCGTGTCGCGC
CGACAGACCCAATCTTCATGATCTATCTTTTCTATCTGAAAAATGATAAC
TTCCCTCCCCAGGCACTTCCTCTTCACACCATACGTTACATCACTAACAA
ACTTCATTCTTCTTCTTCTTCTTTTTTTAAATTCAATCTCACAGGGAAGG
GATGGGAGGGCTTCCTCCAACCCCCCCAGTACCACAATATCTACGCCGAC
TCCCATCTCTACATGCTCTTCGACCCGGCCCTGTGGAAGTTAGGCGCTAA
GGCGCAAACCAACAATATCTGCCAAGGGTACACCACCACGCAATTGGAGA
AGGTGAAGGGGAAGATCGCCTCGGGTGTAGTGATTGGAGAGTATTCTCTT
GACTTTTTGACGTTCCCTGATTTCCCCTACGACGCGGAGACGGAGAAGAA
TCTGCAAAATCTGCTATTGGCCGAGCAGAAGATGTATGGAGTGATCGGTA
ATGCTGATAATGCTGCCGTCGGTGCCTTCTTTTGGTCGTTCAAATCTCTG
GGGCGTGTCAAGGATGATCTGACAAAGTTGGAGGATAACCCTCACTCGCC
CTGGTCCTACCTGTCTTTGCTTAAAGACGGTATTGCCTCCAAAGACCTTG
CCAAGGCCGAATTCAATTGTACGGCTTTCATCGCGGGGTATGCCAACCAG
CCCCCTCCTGCGGCTACGCCGGGTGTGACCACGGCTGGTGGGCCCTCGGG
TGGCGCGGTACAGTAGGGCGCTAGTTGGTCCAGGCAGCAGGAGCAGTGGT
TTGGAGAGACATGCTCTTCAAGCGATCGATTTACTTGTTCGTTTCATAAC
ATTTATTCTTAATTCACTCATTCATTTATTAATTCTTCTGGAGAGTTGGG
GATTAGAGTAAGATTAAGGAACTGACGATGGGAGGGGACCCGAATTGCTA
TCATAAAATTATCCCGTAGCTTTTAATTTTGAAGCATTTTGCTTTCCCTG
ATTTATCTTTTCAGGGAGAGATGGGCCAAGTCGGATGGGCCCCTCTGCCA
CTCTAGGTAGTGCCACGCTGCCTCTCCTCCAACCCGTTATCTGGTGGTCT
TCCATAACTCAGTCGCATCCCTCGCAACGGTAACAGGAAACATGCCGCGC
TCGGCATCGTCGCTTGTTGTGGCTCTGGCCGCCGTGCTCTTTGCGCCACC
ATGCCCCTGCACCGGCTTCCTCTTGCCCACCAGTCCTTCAACATCGCGTT
CGTCATCGTCCTCCAGCAGCAGCAGCAGCAGCGCACCGCGACTCACAGTC
CCCTCAACACCACAAATCACCACCACTACACCGCATTCAAGCTCAATCGA
CGGGGGACGAGGGGACAGCAAAGTAAAGCCATTGGATTGGCTGGAAGAGG
TGCGGCGGAAGAACTACGAGGTGCAGCAGCTACAAGAGACGGAGGAAGGG
GCGCGGCTGCGGAATCGCTTGAGTCGCATGAGCTTGGAAGGCGGGTATCG
TGTGGCACGGGCCATAAAGCGCAGCGCCAAGGACCAAGTCCATTTGATGA
GCGTGGTGGCGGAGATCAAGCGCCGAACACCAACGGGCGCAGAGACTCCG
ACTGAGGTTGCTGCCATTTCCGACGTGGGGTTGATTGCTCGACAGGTAGG
GAGAGGAATATTCAGGAAGGGATGACAAGCAAAGGATGACGAGCGGAGCA
TATTTGACACATTCTCTCCTTCCTTATACATGTGCAGCTTGCTGATTGCG
GTGCCGACGTCCTCCTTGTGACGACAGACGAGATATGTTACGGAGGCTCA
GTGGAGGACCTACGAGCCGTCAAGGCAGCTTTTGCCGATGTACCAGAGGG
TGACAGGCCGCCCATCGTAGCTAAGGACATATACATCCACCCACTACAAA
TCGCCCAGGCCATTGACGCGGGGGCAGATGGCGTACTCCTTATGGCTAGT
TTGGTACGTTGGGTGGATTAATGCTATCAAAGAGCAAGCAAAGGCCTGCG
CGCATGCATCCTCAGCCGTCATGTGAGCTTGATGGCGTGAACTCTTCCTC
TGAGCAATCCTAAACAAACATAAACGATGTCAAAACACCCTCAAGACGCC
CTCCTCCACCATACAAAACCCATAAACTCACAGATGGGCGCCTCCCTTAA
CGAGCTCCTGGACGCCTGCACCTGCCTCGGTACCGAAGCCCTTGTTGAGG
TCCACACAGTCGCCGAGCTCGAAAAGGCCCTTGAACTAGGCGCCACCAAC
ATCGTCGCCACCAACTGGGATCGGATCGAGAATGTGCTCTACCCCAATCA
AGCGAAAGGGCTCAAAGGGCTTATTCCTGATCTGATCGTGGCCATTGGCG
CCGGTGGGGTGGGAACAGTTCAGGATGCCGCAGAACTAGCGGACATGGGC
TACGATGCTGCTGTATTGGGAAGGGGTTTGGCTTCCTCGGCGGATATTGA
ACGGCTGATTTCGACGATCCGGTCGAGGGAGTCCTTGCCCAATTTGTTGA
CCGGCGCGGGGATGATGGCGGAGGAGCTAAAGCGAGGGGAAGGCGACTAA
TGGGCAGGGTAAAATCCAAACATTTCGAAATTAAAACAGATATAGCATGG
CCAATGTAGAAATAAAAAGAAACATGACAAAGCAAGACTACGTGCTTTGG
TGCAAAGCCGAGATAATTAAAACAATGTGCGTTCCGATCTTCTGCTTTTG
GGAATTTGGCGAGGAAATGATCGCGATTGAAGTGCGGCTTGGACCTCGGA
CCAAGCTCTGGTAAGCACTCCCTCCCACCCAAAAACACTCTCAATGTCCC
TCACGTATACAGCAAGGTGCCCAGGACATGCTGGCTCTACTCAGCGCAAC
AATTCATGGCCTCACATTCTTGTCCAACCCCGCCCGTTCCTCACCCGCCT
TCCCGCGTCACACACCATACGGCATACATACAGTCAAGTGGCGTCTGCAA
GGCCAACCATGCGAAGCTACGCGGTGCTTTCCCTCACCATGATGCCCTTC
GCCACGACAAGGGCATTTGTTTTACCTCGATACAGCCCTCGTCTCGAGCA
GCTGTTGGTCCGCAGGTACGTCGTGTGCTCGTCGCCTTGCACATTTATAT
GGGGCATGTCCCGCGCATGCATTATGTTCAGTCCCTAATTTGACGTGTCA
CAAATGCTTGTATGGTCGTCTCAATCTTGTAGACGACCAAATATCTTCGC
ATTTTTCACCTTGCAAGGACCACTCATGGAACTTGACCACTCTACTCCCG
TTTGCAGTGCCACCACCATTCCGCAAACGCCAGCCGCTCCTTCCTCGACG
ACAAACTCACGTGGTCAATTCCCTTTGATCGAACCAGTTTTTGACGAAGT
CTGCGAGATGAGCGGCGTGACTCTTACTCGATATATGATGGAAGTAAGCC
GCGCCAATCCCCACCTCAAGGAGGTTGAGTCCTTGATGAACAGCATCCAA
ACGGCTTGTAAGGTGCGTTACATGAGTGGGTTAAGGGTTGGGATGATTGC
GACATCTTTTTGATCAGCAAGCTCTGTCTTTCATGTCGTCAAATCATATT
GATCCCCATGCCCTCACAAACACCATCGACCCACTCCATCCTCCATCACC
CGCCACCCCTCACCCCTCAAAAGACCATTTCCAGCCTGGTCAACCGCGCA
TGCATCACTAAAATGACCGGGTACCAAGACGATGGCTGCTCCATCAACGT
TCAAG

Coding sequence (CDS) from alignment at scaffold_8:568367..574021+

>mRNA_3989 ID=mRNA_3989|Name=jgi.p|Nanoce1779_2|629673|organism=Nannochloropsis oceanica|type=CDS|length=7230bp|location=Sequence derived from alignment at scaffold_8:568367..574021+ (Nannochloropsis oceanica)
ATGCGTCCCTACTCGACTGCGGCGTTCCTCGCCGTCGTCCTACTCGCAGA
GGGAATAGATGCCCAAAAATTGCGAAGCACAGGTGGAAAGGGTATGGTGG
GTGTGGAAATGACGGCTCAGAGAACTGGCAGTGTAAAAATGGTGCCTGGG
AATGGCAAGGCGGCCGAGGGTGCGGGCGAGAAGCGACAGTATCGAGGTGT
GAACCTGGGCGGCTGGCTGCTAATTGAGTCCTGGATGTATCCGAATTTTT
ACAAGACCCTTGGAATCGAGACATGGTTGGGGGAGATGCAGGTTGTCGAT
GCCCTTGGGGGCAAGGAGAAGGCTAGGCCCTTTTTGGAGGAGCACTGGGA
TACATGGGTTACCAAACAAGATTTACAGAATCTGAAGGACGGAGGTATAA
CCCATATCCGTATCCCAATTGGTTATTGGATTTTGGGGGAAGAATTCTTG
AAGCCTGGTGAGACGTACCTGCCCGGGGCGTGGCCTTATTTATTGCGGTC
CCTGAAGTGGTGTAAGGAGTTGGGATTGAAGGCCATTGTTGACCTTCACG
GCGCGCCGGGAGTGCAGAACGGTCACGACAACGGCGGCTTTGAGGGCGGT
AACGAGTCGATCATGTGGGGCGAGCCGGAGAACCAAAAGCGGACCACTGA
CGTCCTGGTGTACCTGGCCAAGAATCTTACCGTCGTCAATGCCACTGCTG
GTTATGAAGGTTCATTGCAAGGCCTTTGCCTGCTGAATGAACCGTGGACT
ACGACCGTGGGGGGGCCCCTGAGCATGCAGCTTGTCAAGGACTGGGTGCA
GGAGGCGACGGACGCTGTGCTTGCTGCGGGCTGGAAGGGGGATATTTGGT
TTCCTGATGGCTTTGATCTTACTTGGAAGGGATGGGAGGGCTTCCTCCAA
CCCCCCCAGTACCACAATATCTACGCCGACTCCCATCTCTACATGCTCTT
CGACCCGGCCCTGTGGAAGTTAGGCGCTAAGGCGCAAACCAACAATATCT
GCCAAGGGTACACCACCACGCAATTGGAGAAGGTGAAGGGGAAGATCGCC
TCGGGTGTAGTGATTGGAGAGTATTCTCTTGACTTTTTGACGTTCCCTGA
TTTCCCCTACGACGCGGAGACGGAGAAGAATCTGCAAAATCTGCTATTGG
CCGAGCAGAAGATGTATGGAGTGATCGGTAATGCTGATAATGCTGCCGTC
GGTGCCTTCTTTTGGTCGTTCAAATCTCTGGGGCGTGTCAAGGATGATCT
GACAAAGTTGGAGGATAACCCTCACTCGCCCTGGTCCTACCTGTCTTTGC
TTAAAGACGGTATTGCCTCCAAAGACCTTGCCAAGGCCGAATTCAATTGT
ACGGCTTTCATCGCGGGGTATGCCAACCAGCCCCCTCCTGCGGCTACGCC
GGGTGTGACCACGGCTGGTGGGCCCTCGGGTGGCGCGGTACAGTAGATGC
GTCCCTACTCGACTGCGGCGTTCCTCGCCGTCGTCCTACTCGCAGAGGGA
ATAGATGCCCAAAAATTGCGAAGCACAGGTGGAAAGGGTATGGTGGGTGT
GGAAATGACGGCTCAGAGAACTGGCAGTGTAAAAATGGTGCCTGGGAATG
GCAAGGCGGCCGAGGGTGCGGGCGAGAAGCGACAGTATCGAGGTGTGAAC
CTGGGCGGCTGGCTGCTAATTGAGTCCTGGATGTATCCGAATTTTTACAA
GACCCTTGGAATCGAGACATGGTTGGGGGAGATGCAGGTTGTCGATGCCC
TTGGGGGCAAGGAGAAGGCTAGGCCCTTTTTGGAGGAGCACTGGGATACA
TGGGTTACCAAACAAGATTTACAGAATCTGAAGGACGGAGGTATAACCCA
TATCCGTATCCCAATTGGTTATTGGATTTTGGGGGAAGAATTCTTGAAGC
CTGGTGAGACGTACCTGCCCGGGGCGTGGCCTTATTTATTGCGGTCCCTG
AAGTGGTGTAAGGAGTTGGGATTGAAGGCCATTGTTGACCTTCACGGCGC
GCCGGGAGTGCAGAACGGTCACGACAACGGCGGCTTTGAGGGCGGTAACG
AGTCGATCATGTGGGGCGAGCCGGAGAACCAAAAGCGGACCACTGACGTC
CTGGTGTACCTGGCCAAGAATCTTACCGTCGTCAATGCCACTGCTGGTTA
TGAAGGTTCATTGCAAGGCCTTTGCCTGCTGAATGAACCGTGGACTACGA
CCGTGGGGGGGCCCCTGAGCATGCAGCTTGTCAAGGACTGGGTGCAGGAG
GCGACGGACGCTGTGCTTGCTGCGGGCTGGAAGGGGGATATTTGGTTTCC
TGATGGCTTTGATCTTACTTGGAAGGGATGGGAGGGCTTCCTCCAACCCC
CCCAGTACCACAATATCTACGCCGACTCCCATCTCTACATGCTCTTCGAC
CCGGCCCTGTGGAAGTTAGGCGCTAAGGCGCAAACCAACAATATCTGCCA
AGGGTACACCACCACGCAATTGGAGAAGGTGAAGGGGAAGATCGCCTCGG
GTGTAGTGATTGGAGAGTATTCTCTTGACTTTTTGACGTTCCCTGATTTC
CCCTACGACGCGGAGACGGAGAAGAATCTGCAAAATCTGCTATTGGCCGA
GCAGAAGATGTATGGAGTGATCGGTAATGCTGATAATGCTGCCGTCGGTG
CCTTCTTTTGGTCGTTCAAATCTCTGGGGCGTGTCAAGGATGATCTGACA
AAGTTGGAGGATAACCCTCACTCGCCCTGGTCCTACCTGTCTTTGCTTAA
AGACGGTATTGCCTCCAAAGACCTTGCCAAGGCCGAATTCAATTGTACGG
CTTTCATCGCGGGGTATGCCAACCAGCCCCCTCCTGCGGCTACGCCGGGT
GTGACCACGGCTGGTGGGCCCTCGGGTGGCGCGGTACAGTAGATGCGTCC
CTACTCGACTGCGGCGTTCCTCGCCGTCGTCCTACTCGCAGAGGGAATAG
ATGCCCAAAAATTGCGAAGCACAGGTGGAAAGGGTATGGTGGGTGTGGAA
ATGACGGCTCAGAGAACTGGCAGTGTAAAAATGGTGCCTGGGAATGGCAA
GGCGGCCGAGGGTGCGGGCGAGAAGCGACAGTATCGAGGTGTGAACCTGG
GCGGCTGGCTGCTAATTGAGTCCTGGATGTATCCGAATTTTTACAAGACC
CTTGGAATCGAGACATGGTTGGGGGAGATGCAGGTTGTCGATGCCCTTGG
GGGCAAGGAGAAGGCTAGGCCCTTTTTGGAGGAGCACTGGGATACATGGG
TTACCAAACAAGATTTACAGAATCTGAAGGACGGAGGTATAACCCATATC
CGTATCCCAATTGGTTATTGGATTTTGGGGGAAGAATTCTTGAAGCCTGG
TGAGACGTACCTGCCCGGGGCGTGGCCTTATTTATTGCGGTCCCTGAAGT
GGTGTAAGGAGTTGGGATTGAAGGCCATTGTTGACCTTCACGGCGCGCCG
GGAGTGCAGAACGGTCACGACAACGGCGGCTTTGAGGGCGGTAACGAGTC
GATCATGTGGGGCGAGCCGGAGAACCAAAAGCGGACCACTGACGTCCTGG
TGTACCTGGCCAAGAATCTTACCGTCGTCAATGCCACTGCTGGTTATGAA
GGTTCATTGCAAGGCCTTTGCCTGCTGAATGAACCGTGGACTACGACCGT
GGGGGGGCCCCTGAGCATGCAGCTTGTCAAGGACTGGGTGCAGGAGGCGA
CGGACGCTGTGCTTGCTGCGGGCTGGAAGGGGGATATTTGGTTTCCTGAT
GGCTTTGATCTTACTTGGAAGGGATGGGAGGGCTTCCTCCAACCCCCCCA
GTACCACAATATCTACGCCGACTCCCATCTCTACATGCTCTTCGACCCGG
CCCTGTGGAAGTTAGGCGCTAAGGCGCAAACCAACAATATCTGCCAAGGG
TACACCACCACGCAATTGGAGAAGGTGAAGGGGAAGATCGCCTCGGGTGT
AGTGATTGGAGAGTATTCTCTTGACTTTTTGACGTTCCCTGATTTCCCCT
ACGACGCGGAGACGGAGAAGAATCTGCAAAATCTGCTATTGGCCGAGCAG
AAGATGTATGGAGTGATCGGTAATGCTGATAATGCTGCCGTCGGTGCCTT
CTTTTGGTCGTTCAAATCTCTGGGGCGTGTCAAGGATGATCTGACAAAGT
TGGAGGATAACCCTCACTCGCCCTGGTCCTACCTGTCTTTGCTTAAAGAC
GGTATTGCCTCCAAAGACCTTGCCAAGGCCGAATTCAATTGTACGGCTTT
CATCGCGGGGTATGCCAACCAGCCCCCTCCTGCGGCTACGCCGGGTGTGA
CCACGGCTGGTGGGCCCTCGGGTGGCGCGGTACAGTAGATGCGTCCCTAC
TCGACTGCGGCGTTCCTCGCCGTCGTCCTACTCGCAGAGGGAATAGATGC
CCAAAAATTGCGAAGCACAGGTGGAAAGGGTATGGTGGGTGTGGAAATGA
CGGCTCAGAGAACTGGCAGTGTAAAAATGGTGCCTGGGAATGGCAAGGCG
GCCGAGGGTGCGGGCGAGAAGCGACAGTATCGAGGTGTGAACCTGGGCGG
CTGGCTGCTAATTGAGTCCTGGATGTATCCGAATTTTTACAAGACCCTTG
GAATCGAGACATGGTTGGGGGAGATGCAGGTTGTCGATGCCCTTGGGGGC
AAGGAGAAGGCTAGGCCCTTTTTGGAGGAGCACTGGGATACATGGGTTAC
CAAACAAGATTTACAGAATCTGAAGGACGGAGGTATAACCCATATCCGTA
TCCCAATTGGTTATTGGATTTTGGGGGAAGAATTCTTGAAGCCTGGTGAG
ACGTACCTGCCCGGGGCGTGGCCTTATTTATTGCGGTCCCTGAAGTGGTG
TAAGGAGTTGGGATTGAAGGCCATTGTTGACCTTCACGGCGCGCCGGGAG
TGCAGAACGGTCACGACAACGGCGGCTTTGAGGGCGGTAACGAGTCGATC
ATGTGGGGCGAGCCGGAGAACCAAAAGCGGACCACTGACGTCCTGGTGTA
CCTGGCCAAGAATCTTACCGTCGTCAATGCCACTGCTGGTTATGAAGGTT
CATTGCAAGGCCTTTGCCTGCTGAATGAACCGTGGACTACGACCGTGGGG
GGGCCCCTGAGCATGCAGCTTGTCAAGGACTGGGTGCAGGAGGCGACGGA
CGCTGTGCTTGCTGCGGGCTGGAAGGGGGATATTTGGTTTCCTGATGGCT
TTGATCTTACTTGGAAGGGATGGGAGGGCTTCCTCCAACCCCCCCAGTAC
CACAATATCTACGCCGACTCCCATCTCTACATGCTCTTCGACCCGGCCCT
GTGGAAGTTAGGCGCTAAGGCGCAAACCAACAATATCTGCCAAGGGTACA
CCACCACGCAATTGGAGAAGGTGAAGGGGAAGATCGCCTCGGGTGTAGTG
ATTGGAGAGTATTCTCTTGACTTTTTGACGTTCCCTGATTTCCCCTACGA
CGCGGAGACGGAGAAGAATCTGCAAAATCTGCTATTGGCCGAGCAGAAGA
TGTATGGAGTGATCGGTAATGCTGATAATGCTGCCGTCGGTGCCTTCTTT
TGGTCGTTCAAATCTCTGGGGCGTGTCAAGGATGATCTGACAAAGTTGGA
GGATAACCCTCACTCGCCCTGGTCCTACCTGTCTTTGCTTAAAGACGGTA
TTGCCTCCAAAGACCTTGCCAAGGCCGAATTCAATTGTACGGCTTTCATC
GCGGGGTATGCCAACCAGCCCCCTCCTGCGGCTACGCCGGGTGTGACCAC
GGCTGGTGGGCCCTCGGGTGGCGCGGTACAGTAGATGCGTCCCTACTCGA
CTGCGGCGTTCCTCGCCGTCGTCCTACTCGCAGAGGGAATAGATGCCCAA
AAATTGCGAAGCACAGGTGGAAAGGGTATGGTGGGTGTGGAAATGACGGC
TCAGAGAACTGGCAGTGTAAAAATGGTGCCTGGGAATGGCAAGGCGGCCG
AGGGTGCGGGCGAGAAGCGACAGTATCGAGGTGTGAACCTGGGCGGCTGG
CTGCTAATTGAGTCCTGGATGTATCCGAATTTTTACAAGACCCTTGGAAT
CGAGACATGGTTGGGGGAGATGCAGGTTGTCGATGCCCTTGGGGGCAAGG
AGAAGGCTAGGCCCTTTTTGGAGGAGCACTGGGATACATGGGTTACCAAA
CAAGATTTACAGAATCTGAAGGACGGAGGTATAACCCATATCCGTATCCC
AATTGGTTATTGGATTTTGGGGGAAGAATTCTTGAAGCCTGGTGAGACGT
ACCTGCCCGGGGCGTGGCCTTATTTATTGCGGTCCCTGAAGTGGTGTAAG
GAGTTGGGATTGAAGGCCATTGTTGACCTTCACGGCGCGCCGGGAGTGCA
GAACGGTCACGACAACGGCGGCTTTGAGGGCGGTAACGAGTCGATCATGT
GGGGCGAGCCGGAGAACCAAAAGCGGACCACTGACGTCCTGGTGTACCTG
GCCAAGAATCTTACCGTCGTCAATGCCACTGCTGGTTATGAAGGTTCATT
GCAAGGCCTTTGCCTGCTGAATGAACCGTGGACTACGACCGTGGGGGGGC
CCCTGAGCATGCAGCTTGTCAAGGACTGGGTGCAGGAGGCGACGGACGCT
GTGCTTGCTGCGGGCTGGAAGGGGGATATTTGGTTTCCTGATGGCTTTGA
TCTTACTTGGAAGGGATGGGAGGGCTTCCTCCAACCCCCCCAGTACCACA
ATATCTACGCCGACTCCCATCTCTACATGCTCTTCGACCCGGCCCTGTGG
AAGTTAGGCGCTAAGGCGCAAACCAACAATATCTGCCAAGGGTACACCAC
CACGCAATTGGAGAAGGTGAAGGGGAAGATCGCCTCGGGTGTAGTGATTG
GAGAGTATTCTCTTGACTTTTTGACGTTCCCTGATTTCCCCTACGACGCG
GAGACGGAGAAGAATCTGCAAAATCTGCTATTGGCCGAGCAGAAGATGTA
TGGAGTGATCGGTAATGCTGATAATGCTGCCGTCGGTGCCTTCTTTTGGT
CGTTCAAATCTCTGGGGCGTGTCAAGGATGATCTGACAAAGTTGGAGGAT
AACCCTCACTCGCCCTGGTCCTACCTGTCTTTGCTTAAAGACGGTATTGC
CTCCAAAGACCTTGCCAAGGCCGAATTCAATTGTACGGCTTTCATCGCGG
GGTATGCCAACCAGCCCCCTCCTGCGGCTACGCCGGGTGTGACCACGGCT
GGTGGGCCCTCGGGTGGCGCGGTACAGTAG

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