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Properties
| Property Name | Value |
|---|
| TranscriptId | 586074 |
| Track | FilteredModels2 |
| ProteinId | 585988 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:525383..526699 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3970 ID=mRNA_3970|Name=jgi.p|Nanoce1779_2|585988|organism=Nannochloropsis oceanica|type=mRNA|length=1317bp
AACAGATTGACGCAATGGCGCGCCTGCTTTTTGTCACCTCCTCCGCCCTG
CTCTTGCAGGCAGCTATGGCTTTCGTGCCCACCAGCAAGCTGGCTCCCAT
GCCCCAGCGAACTGCCACCCGCAGCAGCCGCACGGGCCTCCGTATGGCCG
CCACACCTGCTGAGTACAAGGCTTGCTACGAAGAGCTGCTCACATTCGCC
GACAAGAACAACTGCGCGCCCATTTTGGTGCGTCTGGCTTGGCACGACGC
TGGTACTTTCAACGTTGCCAATGCCGGTCAGCCTTTCCCTGCTCGTGGTG
GTGCCAATGGTTCCATCCGGTTCGAGCCCGAGATCAAGCACGGTGCCAAC
GCCGGTCTGAGCGATGCGCTTAAGCTCTTGGGCCCCGTCAAGAAGAGGCA
TCCGACCGTGGGCTGGGCTGATCTCATGCAAGCTGCATCTGCGGCCGGAA
TCGAGGCCACCGGTGGCCCGCGTATCCCCATGAAGTACGGCCGCAAGGAC
GCCGAGGGACCCGAAGACTGCCCCAAGGAGGGGAACTTGCCGGGCGCCAA
CTTGCCTGGGCAACAAACGGGGCCTTTTGATGATGGCACCCCTACGCCGG
CTGCTCACTTGCGCAAAGTCTTTCACCGCATGGGTTTGACTGACCAGGAT
ATTGTGGCTCTCTCGGGCGCCCACACTTTGGGCCGCGCGTATAAGGAACG
GTCCGGGCTTGGGAAGGAGTCGACCAAGTACACGGACGGCAAGCACATCG
CCCGTGGAGATGGGAAGGAGGGGCATGGTCGTAAGGGTGGGCAGCCGTGG
ACTGAAAAGTTCTTGAAGTTTGATAATTCGTACTTCACCACCATGTATGA
TGAGAAGGCGGACCCGGAGTTGCTCAAGCTGGACACAGATTTGTGTATTT
TTGGAGATGAAGGGTTTAGGCCGTTTGCCTTGAAGTACAAGGATGACCAG
GCGGCATTCTTTGCGGATTACTGCGTGAGTCACGCGAAGTTGTCAGAGTT
GGGGGCAGAATGGGAGGTGCCCGGTGGAGTGACGTTTTAAGTAATAGTGG
CGGTAGAGAGGAGATTTATTTTGGTTTGATTGATTGAATAGGAGGGAAGG
AGTCTAGGCGTATCGTAGTGGCTTTGGTGGCGCTGCAAGGATAGGAGAGG
AGGAGGAAACATCTTCTCGTCTTTTTCTACTAATTGTTTTGTCCACTATC
TGCCTGAAGGACTGACTGATTGACTTACACCAGGCAAAGCTTAGCACAAG
AATGAATCTTTCAAGCCTCGTGAAGATGGAAAGATAATAAAGGGAGACGA
GAAAGAGATGCCATCAC back to topprotein sequence of jgi.p|Nanoce1779_2|585988 >mRNA_3970-protein ID=mRNA_3970-protein|Name=jgi.p|Nanoce1779_2|585988|organism=Nannochloropsis oceanica|type=polypeptide|length=342bp
MARLLFVTSSALLLQAAMAFVPTSKLAPMPQRTATRSSRTGLRMAATPAE
YKACYEELLTFADKNNCAPILVRLAWHDAGTFNVANAGQPFPARGGANGS
IRFEPEIKHGANAGLSDALKLLGPVKKRHPTVGWADLMQAASAAGIEATG
GPRIPMKYGRKDAEGPEDCPKEGNLPGANLPGQQTGPFDDGTPTPAAHLR
KVFHRMGLTDQDIVALSGAHTLGRAYKERSGLGKESTKYTDGKHIARGDG
KEGHGRKGGQPWTEKFLKFDNSYFTTMYDEKADPELLKLDTDLCIFGDEG
FRPFALKYKDDQAAFFADYCVSHAKLSELGAEWEVPGGVTF* back to topmRNA from alignment at scaffold_8:525383..526699- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3970 ID=mRNA_3970|Name=jgi.p|Nanoce1779_2|585988|organism=Nannochloropsis oceanica|type=mRNA|length=1317bp|location=Sequence derived from alignment at scaffold_8:525383..526699- (Nannochloropsis oceanica)
AACAGATTGACGCAATGGCGCGCCTGCTTTTTGTCACCTCCTCCGCCCTG
CTCTTGCAGGCAGCTATGGCTTTCGTGCCCACCAGCAAGCTGGCTCCCAT
GCCCCAGCGAACTGCCACCCGCAGCAGCCGCACGGGCCTCCGTATGGCCG
CCACACCTGCTGAGTACAAGGCTTGCTACGAAGAGCTGCTCACATTCGCC
GACAAGAACAACTGCGCGCCCATTTTGGTGCGTCTGGCTTGGCACGACGC
TGGTACTTTCAACGTTGCCAATGCCGGTCAGCCTTTCCCTGCTCGTGGTG
GTGCCAATGGTTCCATCCGGTTCGAGCCCGAGATCAAGCACGGTGCCAAC
GCCGGTCTGAGCGATGCGCTTAAGCTCTTGGGCCCCGTCAAGAAGAGGCA
TCCGACCGTGGGCTGGGCTGATCTCATGCAAGCTGCATCTGCGGCCGGAA
TCGAGGCCACCGGTGGCCCGCGTATCCCCATGAAGTACGGCCGCAAGGAC
GCCGAGGGACCCGAAGACTGCCCCAAGGAGGGGAACTTGCCGGGCGCCAA
CTTGCCTGGGCAACAAACGGGGCCTTTTGATGATGGCACCCCTACGCCGG
CTGCTCACTTGCGCAAAGTCTTTCACCGCATGGGTTTGACTGACCAGGAT
ATTGTGGCTCTCTCGGGCGCCCACACTTTGGGCCGCGCGTATAAGGAACG
GTCCGGGCTTGGGAAGGAGTCGACCAAGTACACGGACGGCAAGCACATCG
CCCGTGGAGATGGGAAGGAGGGGCATGGTCGTAAGGGTGGGCAGCCGTGG
ACTGAAAAGTTCTTGAAGTTTGATAATTCGTACTTCACCACCATGTATGA
TGAGAAGGCGGACCCGGAGTTGCTCAAGCTGGACACAGATTTGTGTATTT
TTGGAGATGAAGGGTTTAGGCCGTTTGCCTTGAAGTACAAGGATGACCAG
GCGGCATTCTTTGCGGATTACTGCGTGAGTCACGCGAAGTTGTCAGAGTT
GGGGGCAGAATGGGAGGTGCCCGGTGGAGTGACGTTTTAAGTAATAGTGG
CGGTAGAGAGGAGATTTATTTTGGTTTGATTGATTGAATAGGAGGGAAGG
AGTCTAGGCGTATCGTAGTGGCTTTGGTGGCGCTGCAAGGATAGGAGAGG
AGGAGGAAACATCTTCTCGTCTTTTTCTACTAATTGTTTTGTCCACTATC
TGCCTGAAGGACTGACTGATTGACTTACACCAGGCAAAGCTTAGCACAAG
AATGAATCTTTCAAGCCTCGTGAAGATGGAAAGATAATAAAGGGAGACGA
GAAAGAGATGCCATCAC back to topCoding sequence (CDS) from alignment at scaffold_8:525383..526699- >mRNA_3970 ID=mRNA_3970|Name=jgi.p|Nanoce1779_2|585988|organism=Nannochloropsis oceanica|type=CDS|length=1026bp|location=Sequence derived from alignment at scaffold_8:525383..526699- (Nannochloropsis oceanica)
ATGGCGCGCCTGCTTTTTGTCACCTCCTCCGCCCTGCTCTTGCAGGCAGC
TATGGCTTTCGTGCCCACCAGCAAGCTGGCTCCCATGCCCCAGCGAACTG
CCACCCGCAGCAGCCGCACGGGCCTCCGTATGGCCGCCACACCTGCTGAG
TACAAGGCTTGCTACGAAGAGCTGCTCACATTCGCCGACAAGAACAACTG
CGCGCCCATTTTGGTGCGTCTGGCTTGGCACGACGCTGGTACTTTCAACG
TTGCCAATGCCGGTCAGCCTTTCCCTGCTCGTGGTGGTGCCAATGGTTCC
ATCCGGTTCGAGCCCGAGATCAAGCACGGTGCCAACGCCGGTCTGAGCGA
TGCGCTTAAGCTCTTGGGCCCCGTCAAGAAGAGGCATCCGACCGTGGGCT
GGGCTGATCTCATGCAAGCTGCATCTGCGGCCGGAATCGAGGCCACCGGT
GGCCCGCGTATCCCCATGAAGTACGGCCGCAAGGACGCCGAGGGACCCGA
AGACTGCCCCAAGGAGGGGAACTTGCCGGGCGCCAACTTGCCTGGGCAAC
AAACGGGGCCTTTTGATGATGGCACCCCTACGCCGGCTGCTCACTTGCGC
AAAGTCTTTCACCGCATGGGTTTGACTGACCAGGATATTGTGGCTCTCTC
GGGCGCCCACACTTTGGGCCGCGCGTATAAGGAACGGTCCGGGCTTGGGA
AGGAGTCGACCAAGTACACGGACGGCAAGCACATCGCCCGTGGAGATGGG
AAGGAGGGGCATGGTCGTAAGGGTGGGCAGCCGTGGACTGAAAAGTTCTT
GAAGTTTGATAATTCGTACTTCACCACCATGTATGATGAGAAGGCGGACC
CGGAGTTGCTCAAGCTGGACACAGATTTGTGTATTTTTGGAGATGAAGGG
TTTAGGCCGTTTGCCTTGAAGTACAAGGATGACCAGGCGGCATTCTTTGC
GGATTACTGCGTGAGTCACGCGAAGTTGTCAGAGTTGGGGGCAGAATGGG
AGGTGCCCGGTGGAGTGACGTTTTAA back to top
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