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Properties
| Property Name | Value |
|---|
| TranscriptId | 668516 |
| Track | FilteredModels2 |
| ProteinId | 668430 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:984193..986227 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_397 ID=mRNA_397|Name=jgi.p|Nanoce1779_2|668430|organism=Nannochloropsis oceanica|type=mRNA|length=1409bp
AATTGGCAGAGATGGTAGGCCTGTTATCACAGTGGCTCGACCATGGGAGG
ACACATGGGATGTGCCATTCTGATGACGGTCCCGCGAGCACCCTCTGTGT
TTTCGGGCGCCATTACAGCCCTGCGGCCGTACCGCTCGCCGCCTCCACAC
AGCCTCACTCACATGCCGTCTTCATGCCCATGCGCTCTCCACTTGGTATG
CTTGCTTTAGAGGATTATTGGGCAAGAATGAGTGACGTTGTTGGGTGGCC
AGCAAACGCTTCCGCAACGCGCTTACGATTGGTGGTGGTGGGCTTGCCTC
CCTCCTGTCTGCTTTCTTTGCTTCCTTATGCGTGCAGTCATTATCTCACC
CCTATTTTCTCATGACCATCACAGGAAAGAAGAGAGCCTCCTCTCCTTAC
AACAGCAGCCATGGCCAAGTCCAAGAACCACACGAACCGAAACCAGTCTT
TTAAGGCGCACCGAAACGGCATCAAGAAGCCCAAGAACTACGTCTCCAAG
TCCCTCAAGGGGATGGACCCCAAGTACTTGCGCAACCAGCGTTTCGCGAA
GAAACACAACAAGGTCGTCAAGGTAGTGAAGGCATAAAGATGGAGGCATG
AGACGAAGCAAGATGATGGAAGGAGGGAGATATGGAAGAAGAGAACGAAG
AGGGATGGATGTTCTGTAAAGTGACGACTTTCTCACAAGCCCCATTTTTC
ATGGCGTTTGTTTTGGTGGCGGACCGGGAGGCCCTTTCCTATCATATTGG
CTACAGCTGTCTTGCCTTCCTTTTTCCCTTATGTACACCGAAAGGTGATT
ACAAGAGGAGAGAAGGAAAGGGAAGCGATGAAGTTTATGACGATGGCGAG
AAAGGACCCATACAAAGCAAAATAAGCATCCCAGAGAAAAAAGGTTACAT
ACGCAGACTCAAACGGAGCGTTCTCTTATTATTTTGTGTGTGTTCGGCAT
CGGTCCTTATTTTGGTTGGCTGGCCTCTGTTGCTCAAGCTCGGGAGGAAA
CTGCGAACATGAGATAAAAACCAACCACTCAGATGTGTGGATAAAAAATT
CCAGCAACATGACAACAAGACAAATCTTCATGCAATTGCCTTTCCCTTCA
GCCTTCATTCTTGATTCTTGTTTTTTTCATCTTTTTCTTGGCCAAGATGT
TTATTTATCCGCTGCGGCCAAGCCGGACATGTCCCGGATACCACTTAGAA
GCGACATGCGCTCTCGGACACGCTGTGCGGCGCCCTTTGCCCGCGGGCTT
GTGCACGACGCCTGCTGCTGCTGCTGTTGTTGCTGTGTGGGGTAATGGTA
ATGCCGTGATTGGCAGAGCCCTCGTTTCGAGCGCAAAGCCCGGCGTAGAT
GCTTGAGCTCGGCCTCCTTCCGATGAATGTCCTCAATCAATGCCCGCAAG
TCCTCCTCC back to topprotein sequence of jgi.p|Nanoce1779_2|668430 >mRNA_397-protein ID=mRNA_397-protein|Name=jgi.p|Nanoce1779_2|668430|organism=Nannochloropsis oceanica|type=polypeptide|length=127bp
MEEENEEGWMFCKVTTFSQAPFFMAFVLVADREALSYHIGYSCLAFLFPL
CTPKGDYKRREGKGSDEVYDDGEKGPIQSKISIPEKKGYIRRLKRSVLLL
FCVCSASVLILVGWPLLLKLGRKLRT* back to topmRNA from alignment at scaffold_3:984193..986227+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_397 ID=mRNA_397|Name=jgi.p|Nanoce1779_2|668430|organism=Nannochloropsis oceanica|type=mRNA|length=2035bp|location=Sequence derived from alignment at scaffold_3:984193..986227+ (Nannochloropsis oceanica)
AATTGGCAGAGATGGTAGGCCTGTTATCACAGTGGCTCGACCATGGGAGG
ACACATGGGATGTGCCATTCTGATGACGGTCCCGCGAGCACCCTCTGTGT
TTTCGGGCGCCATTACAGCCCTGCGGCCGTACCGCTCGCCGCCTCCACAC
AGCCTCACTCACATGCCGTCTTCATGCCCATGCGCTCTCCACTTGGTATG
CTTGCTTTAGAGGATTATTGGGCAAGAATGAGTGACGTTGTTGGGTGGCC
AGCAAACGCTTCCGCAACGCGCTTACGATTGGTGGTGGTGGGCTTGCCTC
CCTCCTGTCTGCTTTCTTTGCTTCCTTATGCGTGCAGTCATTATCTCACC
CCTATTTTCTCATGACCATCACAGGAAAGAAGAGAGCCTCCTCTCCTTAC
AACAGCAGCCATGGCCAAGGTACGTTTCGTGGAGGACGCGGAGGAGTAAA
GGTTTCGAAAGGGGATGGAGGGAGGGAGAGATGGCATCGAGGAGGGGGAC
GATGAGCAGATAAAGCGAATTGGAGCATGCTTACGGGATGTAGTGGATGC
CGGAGGCAGAGGAAGAGTGTTAGGCCATGCTATGGGTTTGCGGAAATGTG
CCCGACAACCGTGGGCGGGAGCTGGAGGCCGAGGTTCCTCTCGCGTGATG
CTTGCATCGATCGAGCGGCCCCCTCTAACCCTTAATTTGCCTTTTCCTCT
CCGTCCCCCCTTCCTAATCCCATCGCAGTCCAAGAACCACACGAACCGAA
ACCAGTCTTTTAAGGCGCACCGAAACGGCATCAAGAAGCCCAAGAACTAC
GTCTCCAAGTCCCTCAAGGGGGTAAGTGTCGTCGGAATGATTTCTATTTT
ATTATTATTTTTATTTTCCATACATACTAGTGCGTGGATTGTGGTGCAAA
TTTGCTTGGATTGAGAGTCATAGCATACTTCTGTCTTTATTTTATCCGGT
GGCTTTGGCAAGCTATGTTAATTAATTCACTTTTGACTGATCACTTCATG
TGCTGTTTTTCGTAATCGTGTATGCTGTAATGCTTCTACTCTTCTCTTCT
CCTGCCTCTCCCCCTAAACTCTCCCTCCCTCCCTCCTTCCTTCCCTCCCT
CCCTCCCTCCTTCCCTCCCCTCACCTTCACATTTCCAGATGGACCCCAAG
TACTTGCGCAACCAGCGTTTCGCGAAGAAACACAACAAGGTCGTCAAGGT
AGTGAAGGCATAAAGATGGAGGCATGAGACGAAGCAAGATGATGGAAGGA
GGGAGATATGGAAGAAGAGAACGAAGAGGGATGGATGTTCTGTAAAGTGA
CGACTTTCTCACAAGCCCCATTTTTCATGGCGTTTGTTTTGGTGGCGGAC
CGGGAGGCCCTTTCCTATCATATTGGCTACAGCTGTCTTGCCTTCCTTTT
TCCCTTATGTACACCGAAAGGTGATTACAAGAGGAGAGAAGGAAAGGGAA
GCGATGAAGTTTATGACGATGGCGAGAAAGGACCCATACAAAGCAAAATA
AGCATCCCAGAGAAAAAAGGTTACATACGCAGACTCAAACGGAGCGTTCT
CTTATTATTTTGTGTGTGTTCGGCATCGGTCCTTATTTTGGTTGGCTGGC
CTCTGTTGCTCAAGCTCGGGAGGAAACTGCGAACATGAGATAAAAACCAA
CCACTCAGATGTGTGGATAAAAAATTCCAGCAACATGACAACAAGACAAA
TCTTCATGCAATTGCCTTTCCCTTCAGCCTTCATTCTTGATTCTTGTTTT
TTTCATCTTTTTCTTGGCCAAGATGTTTATTTATCCGCTGCGGCCAAGCC
GGACATGTCCCGGATACCACTTAGAAGCGACATGCGCTCTCGGACACGCT
GTGCGGCGCCCTTTGCCCGCGGGCTTGTGCACGACGCCTGCTGCTGCTGC
TGTTGTTGCTGTGTGGGGTAATGGTAATGCCGTGATTGGCAGAGCCCTCG
TTTCGAGCGCAAAGCCCGGCGTAGATGCTTGAGCTCGGCCTCCTTCCGAT
GAATGTCCTCAATCAATGCCCGCAAGTCCTCCTCC back to topCoding sequence (CDS) from alignment at scaffold_3:984193..986227+ >mRNA_397 ID=mRNA_397|Name=jgi.p|Nanoce1779_2|668430|organism=Nannochloropsis oceanica|type=CDS|length=381bp|location=Sequence derived from alignment at scaffold_3:984193..986227+ (Nannochloropsis oceanica)
ATGGAAGAAGAGAACGAAGAGGGATGGATGTTCTGTAAAGTGACGACTTT
CTCACAAGCCCCATTTTTCATGGCGTTTGTTTTGGTGGCGGACCGGGAGG
CCCTTTCCTATCATATTGGCTACAGCTGTCTTGCCTTCCTTTTTCCCTTA
TGTACACCGAAAGGTGATTACAAGAGGAGAGAAGGAAAGGGAAGCGATGA
AGTTTATGACGATGGCGAGAAAGGACCCATACAAAGCAAAATAAGCATCC
CAGAGAAAAAAGGTTACATACGCAGACTCAAACGGAGCGTTCTCTTATTA
TTTTGTGTGTGTTCGGCATCGGTCCTTATTTTGGTTGGCTGGCCTCTGTT
GCTCAAGCTCGGGAGGAAACTGCGAACATGA back to top
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