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Properties
| Property Name | Value |
| TranscriptId | 585597 |
| Track | FilteredModels2 |
| ProteinId | 585511 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_8 | supercontig | scaffold_8:157022..159671 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3836 ID=mRNA_3836|Name=jgi.p|Nanoce1779_2|585511|organism=Nannochloropsis oceanica|type=mRNA|length=2574bp ACAGACGCACAGGTGCACGGACCCGAAACCATGCCTGACTTTATGCCGCT CTCTTTATGGAATCAAGCTGCGAGGAAAGTCCTGGTGCTCGTTATTCTAG TTACCTTACCCCTATACTACTTAGCTACTGATCAACGGTTTAGTGGTGAA GACTTGAAAGACTTTACCAGCTTTTGGATGTTGAAAACCGCAAACAGGCA GCACAGTTCTACGGCTACGACTGAAAATACCGATAACCACTCGACTGCTA CCTCGGGAAGCTCATGGAAAGGTGAAAAGATTCGAGAATTTCCTCCAGAA CGTCTTCAAGAACTCCCTGAGCCTTTGTCTCTTCCGTCTGAGCTCTCTCG ATATATTTTGTCTGTTTCACCGCAGGTGAAGAAGTGCTCAAATTGGGCTG TGGTCACAACAATTTTTAATGTATCGACGGCTGTGTCTCAAACAGCTAGA CTATTAGACAAGTGGTGTATGGCAGTCGTTGCCGATAAAAGGGGTCCCAA ACAATACGAAATTGACAACCCACTTGTATTTTACCTAAGCATCGACATCC AAGTCCAAATGGCTTCTCTATCGCCAATGGTCGAAGCAATACCATGGAAT CACTTTGGCCGCAAAAATGTGGGGTATTTATGGGCCATCGTTCATGGCGC ACAGGTGATTTGGGACTTTGACGACGATAACGAGCTTTTGGCACCACTTG TGCCATGGAGGCCAAATTCTTTAGTCAACAATACAATCTTTTTCCCCAAC TACAACGAATCTGTCATGAATGTCTATCCCTATCTTGGAGCTTCAAACAA CAAGTCGTGGCCTCGTGGGTTCCCACTTCTGCAATTAAAGGTCGAAGCAT CTAATCCGACTCCGTCAAATACAAAGGCTCTTTTGGGCAGTTGGAACTCG TCCAAAATAGGCATTGTGCAGTCCTTGGCCAATCACGATCCAGATGTGGA CGCCATCTACAGAATCACCCAAACTTTACCACTTAACTTTGATCGTAGCG ATACCACACGCACTTTGATTCTTCCAAAACGAACGATGTCGCCGTATAAC GCCCAAGCTACTTTACATTATCACAATGCATTATGGACTTTGATGCTCCC TATATCAGTCCACGGCCGCGTTGCAGATATTTTACGTTCCTATATTATGC AGCGTCTCCTTTGGGATGCTGGTATCCAGATCGCTTTTGACGGGCCGTGG GTCCGACAAGAACGGAATGTACATAATTACCTTGCCGACTTCGACTCTGA ACAACCATTATATTTGCGTACGGAAAAATTGGTCGAGTTTTTGTTGTCTT GGAAATCAAGTAAGGCCACTTTGCCTGAACGCATCATAGATTTGTACGTA GAGATGTATGAGCGGGGCTACATTGACGCCGTGGATGTCGACTTGATTCA GTACTGGCTGGCCGAACTTTTGAATAGTGGATACATTTTTCCAACGATTG CTTCCAGAGCAACTCTCATTGTCCGGACGTATGGCCACGACATAAAACGC TTGAATGAGTATTTGTTACCAACACTTGACATGTTCGTCAACAAGAAAGA TTTCGACTTCACCATTGTTCTAGATAATGAGAATGCTCACGACCACTTAA TTGGAACTTGTCTCGTACAAAATGGATACAATGTCGTATATGAAGATTTA CCACTCGACCACGAAAAAATTTTCCGTGGGACAGCTTTCGGAGGCAGCTA TGGAAGACCAGGATACGACCGTCAACAGTGGTCGACATTTTATCTTGACC AGCATACCGACGCGGATTTAATTGGTGTAATGGATGCAGACTCGATGGTG TACGCGTATCTGGCTAGGTCATCTATTTACGATCAAGATGCACGAATCCT GTTGAGGGCTGCCACCGGTGACCACTACCAAAACGATCCGTTGGCACTGA AAAGCACTCGTACCGCATCCCAATTTTTGGACTTCATGTGGACGGATAGA AACCCGTTTTGGTTACGTCGGGAGACGTTTCAGAATGTTCGTAACTACAT CTCGAATGAATGGGAAAAATCATTCGATGAAGCATTTGTTGCCTTTTCCG ACAAATCATATTCCCAATTCAACATTATTTTCAACTACGCCGTTGTGGAA GAGTCAAACTTTTATCGAGCCATTCTACCTAATGATTCCACTGGAGTAGT GAGTGTAGGCTGCAACCGGTGCCGACCAGAAGATGTTCCTATTGGATGCT GTCGGTCGTTTGGCGTAGAATGTGAAAATTTACAGCACGAATGGAGGGGT AATATAGATCATTTGCTCCGATTTAATAATTATGATGTATCATGGATTGG GCGCGGGGACATGGTCGATGCATACTATAGTGAAGTGCAAAAGGAATTAG GAGAGATTGATCCAGATCTGGTTGATGAGATGAAACAGTCTTGTGAAGCC TATATTAAGGGCCAAGTTCGGCACGGGACACTTTGCGTCGAACTTTAAAC GGATAATGGCGTGTACACAATCCGAGGCATGAGGTGGGAAGTAATAATAT CCGAAGCACATTTCCATTACATCCCAAATAAAGCGCGAAGCGCGTAATAA CAACCATGACAAATGACATAATCC back to topprotein sequence of jgi.p|Nanoce1779_2|585511 >mRNA_3836-protein ID=mRNA_3836-protein|Name=jgi.p|Nanoce1779_2|585511|organism=Nannochloropsis oceanica|type=polypeptide|length=806bp MPDFMPLSLWNQAARKVLVLVILVTLPLYYLATDQRFSGEDLKDFTSFWM LKTANRQHSSTATTENTDNHSTATSGSSWKGEKIREFPPERLQELPEPLS LPSELSRYILSVSPQVKKCSNWAVVTTIFNVSTAVSQTARLLDKWCMAVV ADKRGPKQYEIDNPLVFYLSIDIQVQMASLSPMVEAIPWNHFGRKNVGYL WAIVHGAQVIWDFDDDNELLAPLVPWRPNSLVNNTIFFPNYNESVMNVYP YLGASNNKSWPRGFPLLQLKVEASNPTPSNTKALLGSWNSSKIGIVQSLA NHDPDVDAIYRITQTLPLNFDRSDTTRTLILPKRTMSPYNAQATLHYHNA LWTLMLPISVHGRVADILRSYIMQRLLWDAGIQIAFDGPWVRQERNVHNY LADFDSEQPLYLRTEKLVEFLLSWKSSKATLPERIIDLYVEMYERGYIDA VDVDLIQYWLAELLNSGYIFPTIASRATLIVRTYGHDIKRLNEYLLPTLD MFVNKKDFDFTIVLDNENAHDHLIGTCLVQNGYNVVYEDLPLDHEKIFRG TAFGGSYGRPGYDRQQWSTFYLDQHTDADLIGVMDADSMVYAYLARSSIY DQDARILLRAATGDHYQNDPLALKSTRTASQFLDFMWTDRNPFWLRRETF QNVRNYISNEWEKSFDEAFVAFSDKSYSQFNIIFNYAVVEESNFYRAILP NDSTGVVSVGCNRCRPEDVPIGCCRSFGVECENLQHEWRGNIDHLLRFNN YDVSWIGRGDMVDAYYSEVQKELGEIDPDLVDEMKQSCEAYIKGQVRHGT LCVEL* back to topmRNA from alignment at scaffold_8:157022..159671+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3836 ID=mRNA_3836|Name=jgi.p|Nanoce1779_2|585511|organism=Nannochloropsis oceanica|type=mRNA|length=2650bp|location=Sequence derived from alignment at scaffold_8:157022..159671+ (Nannochloropsis oceanica) ACAGACGCACAGGTGCACGGACCCGAAACCATGCCTGACTTTATGCCGCT
CTCTTTATGGAATCAAGCTGCGAGGAAAGTCCTGGTGCTCGTTATTCTAG
TTACCTTACCCCTATACTACTTAGCTACTGATCAACGGTTTAGTGGTGAA
GACTTGAAAGACTTTACCAGCTTTTGGATGTTGAAAACCGCAAACAGGCA
GCACAGTTCTACGGCTACGACTGAAAATACCGATAACCACTCGACTGCTA
CCTCGGGAAGCTCATGGAAAGGTGAAAAGATTCGAGAATTTCCTCCAGAA
CGTCTTCAAGAACTCCCTGAGCCTTTGTCTCTTCCGTCTGAGCTCTCTCG
ATATATTTTGTCTGTTTCACCGCAGGTGAAGAAGTGCTCAAATTGGGCTG
TGGTCACAACAATTTTTAATGTATCGACGGCTGTGTCTCAAACAGCTAGA
CTATTAGACAAGGTAATCCATTTTTTTTACCTGCTTCATCAAAGGCATCT
AATTAACCCCAAATCCTTCACCACGTCTCCATAAATAGTGGTGTATGGCA
GTCGTTGCCGATAAAAGGGGTCCCAAACAATACGAAATTGACAACCCACT
TGTATTTTACCTAAGCATCGACATCCAAGTCCAAATGGCTTCTCTATCGC
CAATGGTCGAAGCAATACCATGGAATCACTTTGGCCGCAAAAATGTGGGG
TATTTATGGGCCATCGTTCATGGCGCACAGGTGATTTGGGACTTTGACGA
CGATAACGAGCTTTTGGCACCACTTGTGCCATGGAGGCCAAATTCTTTAG
TCAACAATACAATCTTTTTCCCCAACTACAACGAATCTGTCATGAATGTC
TATCCCTATCTTGGAGCTTCAAACAACAAGTCGTGGCCTCGTGGGTTCCC
ACTTCTGCAATTAAAGGTCGAAGCATCTAATCCGACTCCGTCAAATACAA
AGGCTCTTTTGGGCAGTTGGAACTCGTCCAAAATAGGCATTGTGCAGTCC
TTGGCCAATCACGATCCAGATGTGGACGCCATCTACAGAATCACCCAAAC
TTTACCACTTAACTTTGATCGTAGCGATACCACACGCACTTTGATTCTTC
CAAAACGAACGATGTCGCCGTATAACGCCCAAGCTACTTTACATTATCAC
AATGCATTATGGACTTTGATGCTCCCTATATCAGTCCACGGCCGCGTTGC
AGATATTTTACGTTCCTATATTATGCAGCGTCTCCTTTGGGATGCTGGTA
TCCAGATCGCTTTTGACGGGCCGTGGGTCCGACAAGAACGGAATGTACAT
AATTACCTTGCCGACTTCGACTCTGAACAACCATTATATTTGCGTACGGA
AAAATTGGTCGAGTTTTTGTTGTCTTGGAAATCAAGTAAGGCCACTTTGC
CTGAACGCATCATAGATTTGTACGTAGAGATGTATGAGCGGGGCTACATT
GACGCCGTGGATGTCGACTTGATTCAGTACTGGCTGGCCGAACTTTTGAA
TAGTGGATACATTTTTCCAACGATTGCTTCCAGAGCAACTCTCATTGTCC
GGACGTATGGCCACGACATAAAACGCTTGAATGAGTATTTGTTACCAACA
CTTGACATGTTCGTCAACAAGAAAGATTTCGACTTCACCATTGTTCTAGA
TAATGAGAATGCTCACGACCACTTAATTGGAACTTGTCTCGTACAAAATG
GATACAATGTCGTATATGAAGATTTACCACTCGACCACGAAAAAATTTTC
CGTGGGACAGCTTTCGGAGGCAGCTATGGAAGACCAGGATACGACCGTCA
ACAGTGGTCGACATTTTATCTTGACCAGCATACCGACGCGGATTTAATTG
GTGTAATGGATGCAGACTCGATGGTGTACGCGTATCTGGCTAGGTCATCT
ATTTACGATCAAGATGCACGAATCCTGTTGAGGGCTGCCACCGGTGACCA
CTACCAAAACGATCCGTTGGCACTGAAAAGCACTCGTACCGCATCCCAAT
TTTTGGACTTCATGTGGACGGATAGAAACCCGTTTTGGTTACGTCGGGAG
ACGTTTCAGAATGTTCGTAACTACATCTCGAATGAATGGGAAAAATCATT
CGATGAAGCATTTGTTGCCTTTTCCGACAAATCATATTCCCAATTCAACA
TTATTTTCAACTACGCCGTTGTGGAAGAGTCAAACTTTTATCGAGCCATT
CTACCTAATGATTCCACTGGAGTAGTGAGTGTAGGCTGCAACCGGTGCCG
ACCAGAAGATGTTCCTATTGGATGCTGTCGGTCGTTTGGCGTAGAATGTG
AAAATTTACAGCACGAATGGAGGGGTAATATAGATCATTTGCTCCGATTT
AATAATTATGATGTATCATGGATTGGGCGCGGGGACATGGTCGATGCATA
CTATAGTGAAGTGCAAAAGGAATTAGGAGAGATTGATCCAGATCTGGTTG
ATGAGATGAAACAGTCTTGTGAAGCCTATATTAAGGGCCAAGTTCGGCAC
GGGACACTTTGCGTCGAACTTTAAACGGATAATGGCGTGTACACAATCCG
AGGCATGAGGTGGGAAGTAATAATATCCGAAGCACATTTCCATTACATCC
CAAATAAAGCGCGAAGCGCGTAATAACAACCATGACAAATGACATAATCC
back to topCoding sequence (CDS) from alignment at scaffold_8:157022..159671+ >mRNA_3836 ID=mRNA_3836|Name=jgi.p|Nanoce1779_2|585511|organism=Nannochloropsis oceanica|type=CDS|length=4836bp|location=Sequence derived from alignment at scaffold_8:157022..159671+ (Nannochloropsis oceanica) ATGCCTGACTTTATGCCGCTCTCTTTATGGAATCAAGCTGCGAGGAAAGT CCTGGTGCTCGTTATTCTAGTTACCTTACCCCTATACTACTTAGCTACTG ATCAACGGTTTAGTGGTGAAGACTTGAAAGACTTTACCAGCTTTTGGATG TTGAAAACCGCAAACAGGCAGCACAGTTCTACGGCTACGACTGAAAATAC CGATAACCACTCGACTGCTACCTCGGGAAGCTCATGGAAAGGTGAAAAGA TTCGAGAATTTCCTCCAGAACGTCTTCAAGAACTCCCTGAGCCTTTGTCT CTTCCGTCTGAGCTCTCTCGATATATTTTGTCTGTTTCACCGCAGGTGAA GAAGTGCTCAAATTGGGCTGTGGTCACAACAATTTTTAATGTATCGACGG CTGTGTCTCAAACAGCTAGACTATTAGACAAGTGGTGTATGGCAGTCGTT GCCGATAAAAGGGGTCCCAAACAATACGAAATTGACAACCCACTTGTATT TTACCTAAGCATCGACATCCAAGTCCAAATGGCTTCTCTATCGCCAATGG TCGAAGCAATACCATGGAATCACTTTGGCCGCAAAAATGTGGGGTATTTA TGGGCCATCGTTCATGGCGCACAGGTGATTTGGGACTTTGACGACGATAA CGAGCTTTTGGCACCACTTGTGCCATGGAGGCCAAATTCTTTAGTCAACA ATACAATCTTTTTCCCCAACTACAACGAATCTGTCATGAATGTCTATCCC TATCTTGGAGCTTCAAACAACAAGTCGTGGCCTCGTGGGTTCCCACTTCT GCAATTAAAGGTCGAAGCATCTAATCCGACTCCGTCAAATACAAAGGCTC TTTTGGGCAGTTGGAACTCGTCCAAAATAGGCATTGTGCAGTCCTTGGCC AATCACGATCCAGATGTGGACGCCATCTACAGAATCACCCAAACTTTACC ACTTAACTTTGATCGTAGCGATACCACACGCACTTTGATTCTTCCAAAAC GAACGATGTCGCCGTATAACGCCCAAGCTACTTTACATTATCACAATGCA TTATGGACTTTGATGCTCCCTATATCAGTCCACGGCCGCGTTGCAGATAT TTTACGTTCCTATATTATGCAGCGTCTCCTTTGGGATGCTGGTATCCAGA TCGCTTTTGACGGGCCGTGGGTCCGACAAGAACGGAATGTACATAATTAC CTTGCCGACTTCGACTCTGAACAACCATTATATTTGCGTACGGAAAAATT GGTCGAGTTTTTGTTGTCTTGGAAATCAAGTAAGGCCACTTTGCCTGAAC GCATCATAGATTTGTACGTAGAGATGTATGAGCGGGGCTACATTGACGCC GTGGATGTCGACTTGATTCAGTACTGGCTGGCCGAACTTTTGAATAGTGG ATACATTTTTCCAACGATTGCTTCCAGAGCAACTCTCATTGTCCGGACGT ATGGCCACGACATAAAACGCTTGAATGAGTATTTGTTACCAACACTTGAC ATGTTCGTCAACAAGAAAGATTTCGACTTCACCATTGTTCTAGATAATGA GAATGCTCACGACCACTTAATTGGAACTTGTCTCGTACAAAATGGATACA ATGTCGTATATGAAGATTTACCACTCGACCACGAAAAAATTTTCCGTGGG ACAGCTTTCGGAGGCAGCTATGGAAGACCAGGATACGACCGTCAACAGTG GTCGACATTTTATCTTGACCAGCATACCGACGCGGATTTAATTGGTGTAA TGGATGCAGACTCGATGGTGTACGCGTATCTGGCTAGGTCATCTATTTAC GATCAAGATGCACGAATCCTGTTGAGGGCTGCCACCGGTGACCACTACCA AAACGATCCGTTGGCACTGAAAAGCACTCGTACCGCATCCCAATTTTTGG ACTTCATGTGGACGGATAGAAACCCGTTTTGGTTACGTCGGGAGACGTTT CAGAATGTTCGTAACTACATCTCGAATGAATGGGAAAAATCATTCGATGA AGCATTTGTTGCCTTTTCCGACAAATCATATTCCCAATTCAACATTATTT TCAACTACGCCGTTGTGGAAGAGTCAAACTTTTATCGAGCCATTCTACCT AATGATTCCACTGGAGTAGTGAGTGTAGGCTGCAACCGGTGCCGACCAGA AGATGTTCCTATTGGATGCTGTCGGTCGTTTGGCGTAGAATGTGAAAATT TACAGCACGAATGGAGGGGTAATATAGATCATTTGCTCCGATTTAATAAT TATGATGTATCATGGATTGGGCGCGGGGACATGGTCGATGCATACTATAG TGAAGTGCAAAAGGAATTAGGAGAGATTGATCCAGATCTGGTTGATGAGA TGAAACAGTCTTGTGAAGCCTATATTAAGGGCCAAGTTCGGCACGGGACA CTTTGCGTCGAACTTTAAATGCCTGACTTTATGCCGCTCTCTTTATGGAA TCAAGCTGCGAGGAAAGTCCTGGTGCTCGTTATTCTAGTTACCTTACCCC TATACTACTTAGCTACTGATCAACGGTTTAGTGGTGAAGACTTGAAAGAC TTTACCAGCTTTTGGATGTTGAAAACCGCAAACAGGCAGCACAGTTCTAC GGCTACGACTGAAAATACCGATAACCACTCGACTGCTACCTCGGGAAGCT CATGGAAAGGTGAAAAGATTCGAGAATTTCCTCCAGAACGTCTTCAAGAA CTCCCTGAGCCTTTGTCTCTTCCGTCTGAGCTCTCTCGATATATTTTGTC TGTTTCACCGCAGGTGAAGAAGTGCTCAAATTGGGCTGTGGTCACAACAA TTTTTAATGTATCGACGGCTGTGTCTCAAACAGCTAGACTATTAGACAAG TGGTGTATGGCAGTCGTTGCCGATAAAAGGGGTCCCAAACAATACGAAAT TGACAACCCACTTGTATTTTACCTAAGCATCGACATCCAAGTCCAAATGG CTTCTCTATCGCCAATGGTCGAAGCAATACCATGGAATCACTTTGGCCGC AAAAATGTGGGGTATTTATGGGCCATCGTTCATGGCGCACAGGTGATTTG GGACTTTGACGACGATAACGAGCTTTTGGCACCACTTGTGCCATGGAGGC CAAATTCTTTAGTCAACAATACAATCTTTTTCCCCAACTACAACGAATCT GTCATGAATGTCTATCCCTATCTTGGAGCTTCAAACAACAAGTCGTGGCC TCGTGGGTTCCCACTTCTGCAATTAAAGGTCGAAGCATCTAATCCGACTC CGTCAAATACAAAGGCTCTTTTGGGCAGTTGGAACTCGTCCAAAATAGGC ATTGTGCAGTCCTTGGCCAATCACGATCCAGATGTGGACGCCATCTACAG AATCACCCAAACTTTACCACTTAACTTTGATCGTAGCGATACCACACGCA CTTTGATTCTTCCAAAACGAACGATGTCGCCGTATAACGCCCAAGCTACT TTACATTATCACAATGCATTATGGACTTTGATGCTCCCTATATCAGTCCA CGGCCGCGTTGCAGATATTTTACGTTCCTATATTATGCAGCGTCTCCTTT GGGATGCTGGTATCCAGATCGCTTTTGACGGGCCGTGGGTCCGACAAGAA CGGAATGTACATAATTACCTTGCCGACTTCGACTCTGAACAACCATTATA TTTGCGTACGGAAAAATTGGTCGAGTTTTTGTTGTCTTGGAAATCAAGTA AGGCCACTTTGCCTGAACGCATCATAGATTTGTACGTAGAGATGTATGAG CGGGGCTACATTGACGCCGTGGATGTCGACTTGATTCAGTACTGGCTGGC CGAACTTTTGAATAGTGGATACATTTTTCCAACGATTGCTTCCAGAGCAA CTCTCATTGTCCGGACGTATGGCCACGACATAAAACGCTTGAATGAGTAT TTGTTACCAACACTTGACATGTTCGTCAACAAGAAAGATTTCGACTTCAC CATTGTTCTAGATAATGAGAATGCTCACGACCACTTAATTGGAACTTGTC TCGTACAAAATGGATACAATGTCGTATATGAAGATTTACCACTCGACCAC GAAAAAATTTTCCGTGGGACAGCTTTCGGAGGCAGCTATGGAAGACCAGG ATACGACCGTCAACAGTGGTCGACATTTTATCTTGACCAGCATACCGACG CGGATTTAATTGGTGTAATGGATGCAGACTCGATGGTGTACGCGTATCTG GCTAGGTCATCTATTTACGATCAAGATGCACGAATCCTGTTGAGGGCTGC CACCGGTGACCACTACCAAAACGATCCGTTGGCACTGAAAAGCACTCGTA CCGCATCCCAATTTTTGGACTTCATGTGGACGGATAGAAACCCGTTTTGG TTACGTCGGGAGACGTTTCAGAATGTTCGTAACTACATCTCGAATGAATG GGAAAAATCATTCGATGAAGCATTTGTTGCCTTTTCCGACAAATCATATT CCCAATTCAACATTATTTTCAACTACGCCGTTGTGGAAGAGTCAAACTTT TATCGAGCCATTCTACCTAATGATTCCACTGGAGTAGTGAGTGTAGGCTG CAACCGGTGCCGACCAGAAGATGTTCCTATTGGATGCTGTCGGTCGTTTG GCGTAGAATGTGAAAATTTACAGCACGAATGGAGGGGTAATATAGATCAT TTGCTCCGATTTAATAATTATGATGTATCATGGATTGGGCGCGGGGACAT GGTCGATGCATACTATAGTGAAGTGCAAAAGGAATTAGGAGAGATTGATC CAGATCTGGTTGATGAGATGAAACAGTCTTGTGAAGCCTATATTAAGGGC CAAGTTCGGCACGGGACACTTTGCGTCGAACTTTAA back to top
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