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Properties
| Property Name | Value |
|---|
| TranscriptId | 414560 |
| Track | FilteredModels2 |
| ProteinId | 414474 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:63784..65224 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3811 ID=mRNA_3811|Name=jgi.p|Nanoce1779_2|414474|organism=Nannochloropsis oceanica|type=mRNA|length=869bp
CTTTCCTCTCCTTCTTCCGTCTTTCTCCTCCCCACCCGCTTGTCTGCCCT
TTGTCCTTCTTTCCTTTCCCCAGCACCATGCCACGGTGCCCCGCCTCGGC
GATGGCCGCTCACTCCTCCTCTGCCAAGCGTGCCGTAACGGCTGCTATGC
TCGCCGTTACCAGTCCTACTACCCGCCTCACCCTCTACGACGCAAGAGAC
CAGCACGAGACCATCTGCGCCATCTGCTCCAAGAGCTACGGGAGCACACC
CGTCACACTCGTGCTGTGTGACGGCTGTCGTTTCTCCTACTGCATGCCTT
GCCTCCGTACCGTCCTGTCCCCTGCCGAATGTCGAGAGCTGGAGCGGGAG
GGCGCCGAGTGGACTTGTCCCGTCTGCCGCCATAGCGTGCCTCGCCTCTG
CCCCGACACCGAAGAAAATGTCCCTCACTCATCCGACGGCTCGCACTCCC
TCGTCTGGCTTAATAGATGGACGAAGCTTCCTGGGAAGCCTCCGAGCGCC
CGGATGCGCCCGCTCTCTACCTCCCTTGCGACAGGAGATGGAGGAGGGGG
AGGAGGGAGGGGGGAGGGGTCGTTGTTGACGGAGGGGGAGGACCTGGTCG
AAGAGGAGGAGGAGGAGGAGGAGGATCAGGAGGAGGAGGAGGAGGAGAGG
AGGCTGTGGCCGCCATCGAAGGGCGAGTGGGTAAGAGCAATCGATGACGG
TGAAGAAGACAGGAGGGCAATAGCCCTCTTTCCCTTCTCTCCTTCCCTTC
CTCCTTCCCTTCCTCCTTCCCTTCCTCCTTCCCTTCCTCGCTCTTTTGAA
CCCACATACCACTCACGCACACCCGGCGAATAAGCCTCACCTCCCGTCCC
TCCCTCCCCTCTCCCTCCC back to topprotein sequence of jgi.p|Nanoce1779_2|414474 >mRNA_3811-protein ID=mRNA_3811-protein|Name=jgi.p|Nanoce1779_2|414474|organism=Nannochloropsis oceanica|type=polypeptide|length=252bp
MPRCPASAMAAHSSSAKRAVTAAMLAVTSPTTRLTLYDARDQHETICAIC
SKSYGSTPVTLVLCDGCRFSYCMPCLRTVLSPAECRELEREGAEWTCPVC
RHSVPRLCPDTEENVPHSSDGSHSLVWLNRWTKLPGKPPSARMRPLSTSL
ATGDGGGGGGRGEGSLLTEGEDLVEEEEEEEEDQEEEEEERRLWPPSKGE
WVRAIDDGEEDRRAIALFPFSPSLPPSLPPSLPPSLPRSFEPTYHSRTPG
E* back to topmRNA from alignment at scaffold_8:63784..65224- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3811 ID=mRNA_3811|Name=jgi.p|Nanoce1779_2|414474|organism=Nannochloropsis oceanica|type=mRNA|length=1441bp|location=Sequence derived from alignment at scaffold_8:63784..65224- (Nannochloropsis oceanica)
CTTTCCTCTCCTTCTTCCGTCTTTCTCCTCCCCACCCGCTTGTCTGCCCT
TTGTCCTTCTTTCCTTTCCCCAGCACCATGCCACGGTGCCCCGCCTCGGC
GATGGCCGCTCACTCCTCCTCTGCCAAGCGTGCCGTAACGGCTGCTATGC
TCGCCGTTACCAGTCCTACTACCCGCCTCACCCTCTACGACGCAAGAGAC
CAGCACGAGGTACCTCCCCTCACCCCTCCCTCCCTCCCTCTCTCCCTCCC
TCCCTCACGTCCTCATCTGCGCCATCTGCTGCAAGAGCTACGGCATCACA
TCGGTGACCCGCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGACCA
TCTGCGCCATCTGCTCCAAGAGCTACGGGAGCACACCCGTCACACTCGTG
CTGTGTGACGGCTGTCGTTTCTCCTACTGCATGCCTTGCCTCCGTACCGT
CCTGTCCCCTGCCGAAGTACGCAGCGAGGGAGAAAGGGAGGGAGGGAGGG
AGGGAGGGAGAAATTTGAGGCCTGGTTCCATCCATGCCGCACTCCAGTTA
AGTATTCTCACTAATCCTCCCTCCCTCCCTCCCCCCCTCCCTCCCCTTCC
CTCCCTCCCTCCCCTTCCCTCCCTCCCTCCCCTGAGCAGTGTCGAGAGCT
GGAGCGGGAGGGCGCCGAGTGGACTTGTCCCGTCTGCCGCCATAGCGTGC
CTCGCCTCTGGTGCGCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCTTTTATCGCGTAGTCTTCTCAACCCTCCCTCCCTCCGCTCCCTT
TACCCCTCCCTCTCTTCCTCCCTCCATCCCTCCAGCCCCGACACCGAAGA
AAATGTCCCTCACTCATCCGACGGCTCGCACTCCCTCGTCTGGCTTAATA
GGTAAGCCCTCCCTCCCTCCCTCCCTCCCTCTTCTCTTCCATCTTTCCCT
CCCTCCCGCCTTTCCTCTTACCCTCCTATTCCTTCCTTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGATGGACGAAGCT
TCCTGGGAAGCCTCCGAGCGCCCGGATGCGCCCGCTCTCTACCTCCCTTG
CGACAGGAGATGGAGGAGGGGGAGGAGGGAGGGGGGAGGGGTCGTTGTTG
ACGGAGGGGGAGGACCTGGTCGAAGAGGAGGAGGAGGAGGAGGAGGATCA
GGAGGAGGAGGAGGAGGAGAGGAGGCTGTGGCCGCCATCGAAGGGCGAGT
GGGTAAGAGCAATCGATGACGGTGAAGAAGACAGGAGGGCAATAGCCCTC
TTTCCCTTCTCTCCTTCCCTTCCTCCTTCCCTTCCTCCTTCCCTTCCTCC
TTCCCTTCCTCGCTCTTTTGAACCCACATACCACTCACGCACACCCGGCG
AATAAGCCTCACCTCCCGTCCCTCCCTCCCCTCTCCCTCCC back to topCoding sequence (CDS) from alignment at scaffold_8:63784..65224- >mRNA_3811 ID=mRNA_3811|Name=jgi.p|Nanoce1779_2|414474|organism=Nannochloropsis oceanica|type=CDS|length=3780bp|location=Sequence derived from alignment at scaffold_8:63784..65224- (Nannochloropsis oceanica)
ATGGACGAAGCTTCCTGGGAAGCCTCCGAGCGCCCGGATGCGCCCGCTCT
CTACCTCCCTTGCGACAGGAGATGGAGGAGGGGGAGGAGGGAGGGGGGAG
GGGTCGTTGTTGACGGAGGGGGAGGACCTGGTCGAAGAGGAGGAGGAGGA
GGAGGAGGATCAGGAGGAGGAGGAGGAGGAGAGGAGGCTGTGGCCGCCAT
CGAAGGGCGAGTGGGTAAGAGCAATCGATGACGGTGAAGAAGACAGGAGG
GCAATAGCCCTCTTTCCCTTCTCTCCTTCCCTTCCTCCTTCCCTTCCTCC
TTCCCTTCCTCCTTCCCTTCCTCGCTCTTTTGAACCCACATACCACTCAC
GCACACCCGGCGAATAACCCCGACACCGAAGAAAATGTCCCTCACTCATC
CGACGGCTCGCACTCCCTCGTCTGGCTTAATAGTGTCGAGAGCTGGAGCG
GGAGGGCGCCGAGTGGACTTGTCCCGTCTGCCGCCATAGCGTGCCTCGCC
TCTGACCATCTGCGCCATCTGCTCCAAGAGCTACGGGAGCACACCCGTCA
CACTCGTGCTGTGTGACGGCTGTCGTTTCTCCTACTGCATGCCTTGCCTC
CGTACCGTCCTGTCCCCTGCCGAAATGCCACGGTGCCCCGCCTCGGCGAT
GGCCGCTCACTCCTCCTCTGCCAAGCGTGCCGTAACGGCTGCTATGCTCG
CCGTTACCAGTCCTACTACCCGCCTCACCCTCTACGACGCAAGAGACCAG
CACGAGATGGACGAAGCTTCCTGGGAAGCCTCCGAGCGCCCGGATGCGCC
CGCTCTCTACCTCCCTTGCGACAGGAGATGGAGGAGGGGGAGGAGGGAGG
GGGGAGGGGTCGTTGTTGACGGAGGGGGAGGACCTGGTCGAAGAGGAGGA
GGAGGAGGAGGAGGATCAGGAGGAGGAGGAGGAGGAGAGGAGGCTGTGGC
CGCCATCGAAGGGCGAGTGGGTAAGAGCAATCGATGACGGTGAAGAAGAC
AGGAGGGCAATAGCCCTCTTTCCCTTCTCTCCTTCCCTTCCTCCTTCCCT
TCCTCCTTCCCTTCCTCCTTCCCTTCCTCGCTCTTTTGAACCCACATACC
ACTCACGCACACCCGGCGAATAACCCCGACACCGAAGAAAATGTCCCTCA
CTCATCCGACGGCTCGCACTCCCTCGTCTGGCTTAATAGTGTCGAGAGCT
GGAGCGGGAGGGCGCCGAGTGGACTTGTCCCGTCTGCCGCCATAGCGTGC
CTCGCCTCTGACCATCTGCGCCATCTGCTCCAAGAGCTACGGGAGCACAC
CCGTCACACTCGTGCTGTGTGACGGCTGTCGTTTCTCCTACTGCATGCCT
TGCCTCCGTACCGTCCTGTCCCCTGCCGAAATGCCACGGTGCCCCGCCTC
GGCGATGGCCGCTCACTCCTCCTCTGCCAAGCGTGCCGTAACGGCTGCTA
TGCTCGCCGTTACCAGTCCTACTACCCGCCTCACCCTCTACGACGCAAGA
GACCAGCACGAGATGGACGAAGCTTCCTGGGAAGCCTCCGAGCGCCCGGA
TGCGCCCGCTCTCTACCTCCCTTGCGACAGGAGATGGAGGAGGGGGAGGA
GGGAGGGGGGAGGGGTCGTTGTTGACGGAGGGGGAGGACCTGGTCGAAGA
GGAGGAGGAGGAGGAGGAGGATCAGGAGGAGGAGGAGGAGGAGAGGAGGC
TGTGGCCGCCATCGAAGGGCGAGTGGGTAAGAGCAATCGATGACGGTGAA
GAAGACAGGAGGGCAATAGCCCTCTTTCCCTTCTCTCCTTCCCTTCCTCC
TTCCCTTCCTCCTTCCCTTCCTCCTTCCCTTCCTCGCTCTTTTGAACCCA
CATACCACTCACGCACACCCGGCGAATAACCCCGACACCGAAGAAAATGT
CCCTCACTCATCCGACGGCTCGCACTCCCTCGTCTGGCTTAATAGTGTCG
AGAGCTGGAGCGGGAGGGCGCCGAGTGGACTTGTCCCGTCTGCCGCCATA
GCGTGCCTCGCCTCTGACCATCTGCGCCATCTGCTCCAAGAGCTACGGGA
GCACACCCGTCACACTCGTGCTGTGTGACGGCTGTCGTTTCTCCTACTGC
ATGCCTTGCCTCCGTACCGTCCTGTCCCCTGCCGAAATGCCACGGTGCCC
CGCCTCGGCGATGGCCGCTCACTCCTCCTCTGCCAAGCGTGCCGTAACGG
CTGCTATGCTCGCCGTTACCAGTCCTACTACCCGCCTCACCCTCTACGAC
GCAAGAGACCAGCACGAGATGGACGAAGCTTCCTGGGAAGCCTCCGAGCG
CCCGGATGCGCCCGCTCTCTACCTCCCTTGCGACAGGAGATGGAGGAGGG
GGAGGAGGGAGGGGGGAGGGGTCGTTGTTGACGGAGGGGGAGGACCTGGT
CGAAGAGGAGGAGGAGGAGGAGGAGGATCAGGAGGAGGAGGAGGAGGAGA
GGAGGCTGTGGCCGCCATCGAAGGGCGAGTGGGTAAGAGCAATCGATGAC
GGTGAAGAAGACAGGAGGGCAATAGCCCTCTTTCCCTTCTCTCCTTCCCT
TCCTCCTTCCCTTCCTCCTTCCCTTCCTCCTTCCCTTCCTCGCTCTTTTG
AACCCACATACCACTCACGCACACCCGGCGAATAACCCCGACACCGAAGA
AAATGTCCCTCACTCATCCGACGGCTCGCACTCCCTCGTCTGGCTTAATA
GTGTCGAGAGCTGGAGCGGGAGGGCGCCGAGTGGACTTGTCCCGTCTGCC
GCCATAGCGTGCCTCGCCTCTGACCATCTGCGCCATCTGCTCCAAGAGCT
ACGGGAGCACACCCGTCACACTCGTGCTGTGTGACGGCTGTCGTTTCTCC
TACTGCATGCCTTGCCTCCGTACCGTCCTGTCCCCTGCCGAAATGCCACG
GTGCCCCGCCTCGGCGATGGCCGCTCACTCCTCCTCTGCCAAGCGTGCCG
TAACGGCTGCTATGCTCGCCGTTACCAGTCCTACTACCCGCCTCACCCTC
TACGACGCAAGAGACCAGCACGAGATGGACGAAGCTTCCTGGGAAGCCTC
CGAGCGCCCGGATGCGCCCGCTCTCTACCTCCCTTGCGACAGGAGATGGA
GGAGGGGGAGGAGGGAGGGGGGAGGGGTCGTTGTTGACGGAGGGGGAGGA
CCTGGTCGAAGAGGAGGAGGAGGAGGAGGAGGATCAGGAGGAGGAGGAGG
AGGAGAGGAGGCTGTGGCCGCCATCGAAGGGCGAGTGGGTAAGAGCAATC
GATGACGGTGAAGAAGACAGGAGGGCAATAGCCCTCTTTCCCTTCTCTCC
TTCCCTTCCTCCTTCCCTTCCTCCTTCCCTTCCTCCTTCCCTTCCTCGCT
CTTTTGAACCCACATACCACTCACGCACACCCGGCGAATAACCCCGACAC
CGAAGAAAATGTCCCTCACTCATCCGACGGCTCGCACTCCCTCGTCTGGC
TTAATAGTGTCGAGAGCTGGAGCGGGAGGGCGCCGAGTGGACTTGTCCCG
TCTGCCGCCATAGCGTGCCTCGCCTCTGACCATCTGCGCCATCTGCTCCA
AGAGCTACGGGAGCACACCCGTCACACTCGTGCTGTGTGACGGCTGTCGT
TTCTCCTACTGCATGCCTTGCCTCCGTACCGTCCTGTCCCCTGCCGAAAT
GCCACGGTGCCCCGCCTCGGCGATGGCCGCTCACTCCTCCTCTGCCAAGC
GTGCCGTAACGGCTGCTATGCTCGCCGTTACCAGTCCTACTACCCGCCTC
ACCCTCTACGACGCAAGAGACCAGCACGAG back to top
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