Properties
| Property Name | Value |
|---|
| TranscriptId | 583453 |
| Track | FilteredModels2 |
| ProteinId | 583367 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:1199235..1201745 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3765 ID=mRNA_3765|Name=jgi.p|Nanoce1779_2|583367|organism=Nannochloropsis oceanica|type=mRNA|length=1387bp
ACGAGGACGAGGACGAGGACGAGGTGGAGTCGGTGATGACGAACGAGATC
AGCACGGATCCGTCTTGGCGGCAGGTCGTCTCTTTCCCCTTCTTCTACAT
CGCCTTGGGCACTACCCTGGCCACCAGCGGCTTCTCCTTCGTCGAGCCCG
TTCTCTCCGAGCACCTCATGACCACACTCAACGTCTCCACGTCCCTCTCG
GGTGTCTTGATGGGTATCCCTTCCATCACATACATCATCGCTGCCCCTCT
GGGCGGATGGCTCGGGGAGAAGATCGGATACAGACCCATTCTCTTCATAG
GCTTCGTCCTCTTCTCCATTTCCCTCGTCTTTCTGGGTCCAATGCCCCTC
CTCCCTAGCAATCTCCCCTCGGGTTTTACCTGGACTATGCAGGTGTTGGC
GCTGGGCCTCATGGGAGTCGGTTCGGCGTTGGGCACCATCACCACCCTTC
CTGATATGAAGCACGTCGCAGGTCCAGGCACCACGGATATAGGTAAGGAG
GGAGCGAGGGAGCGAGGGAGCGATGGAGCGAGGGAGCGAGGGAGGGGAGG
GGAGAGCGAGGGAGGGAGGAACGAGGGATCAGGCATCAATTAGCTTTTGG
CAATGTGTATGTGCCTCCTCGCCCTCTCTCTCACACATACTCACACTCTA
TATATTCCACACTCTATCGAGACGTCTATCTCACACACACTCTCTCTACA
TAATTCCAGTGGCCTCGATCTTCAGCAACGTCTGTGTACCGGCGGGGGAG
GTGGTCGGGCCGCTCATCGGGGGGGGGTTGACTGAACTCCTCGGCTTTCG
ATGGGCTTCATTTTCGTTGGGGCTGGCCTTAGGGGCCTACGCCGTGTGCC
TGGTGGTGATGGACATGTCGGGCACCATGCCGTGGACGCACCACCGAGAT
CCACGCCACAAGCTCTCTTTAGTGCACTTCTCTTCCTACTCCTCCACTCC
TCCCTCCCCTTCCTTTTCCTCCTCCACCTCCAACTCCCTCCTCGTCGCTC
CTCCTCCCCATCCTGCCCCCTCTCCTTCCTCCTTCCTTCTTGCTCCCTCC
TCCTCTCACTCCCCCCCCTTGACCTGTAGCTACTCCTCCTTTCCAGCCAC
GCCCGAGGAAAGCCGCCGTGGAGAGGGAGGACGCGCGGGAGGAGAAGGAG
GACGAGGACACTACCAGCAGCAGCGGCAGCAAGAGGAGCTCTCCCCTCCT
TCTTATGGAAGGAAAATGACGGAAACGGATGAGTGAGAGGGCGTAGAAAG
GGACGCATGTACATATTTTTTTAAAAACGTGTATAGGTAGGAGGGCGTGG
AGGGGTAGGGGAGGGGCTGTGTTGAATACGTATCGGTTTTGACGATTTAA
AATGAAGGATTGAAATGAAAACATGCGGAAGGTTTAC back to topprotein sequence of jgi.p|Nanoce1779_2|583367 >mRNA_3765-protein ID=mRNA_3765-protein|Name=jgi.p|Nanoce1779_2|583367|organism=Nannochloropsis oceanica|type=polypeptide|length=186bp
MTNEISTDPSWRQVVSFPFFYIALGTTLATSGFSFVEPVLSEHLMTTLNV
STSLSGVLMGIPSITYIIAAPLGGWLGEKIGYRPILFIGFVLFSISLVFL
GPMPLLPSNLPSGFTWTMQVLALGLMGVGSALGTITTLPDMKHVAGPGTT
DIGKEGARERGSDGARERGRGGESEGGRNEGSGIN* back to topmRNA from alignment at scaffold_6:1199235..1201745- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3765 ID=mRNA_3765|Name=jgi.p|Nanoce1779_2|583367|organism=Nannochloropsis oceanica|type=mRNA|length=2511bp|location=Sequence derived from alignment at scaffold_6:1199235..1201745- (Nannochloropsis oceanica)
ACGAGGACGAGGACGAGGACGAGGTGGAGTCGGTGATGACGAACGAGATC
AGCACGGATCCGTCTTGGCGGCAGGTGAATTAAATACCCTCCCCTCCCTT
CCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTCCCTTTCCCCCTCCATCCA
CTGCTTCCTTCTCTACTGATTCGTCTCTCCCCCTCCCTTTCTTCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCCCCTCCCCCGTCAGGTCGTCTCT
TTCCCCTTCTTCTACATCGCCTTGGGCACTACCCTGGCCACCAGCGGCTT
CTCCTTCGTCGAGCCCGTTCTCTCCGAGCACCTCATGACCACACTCAACG
TAAGCACGGGAATGCACCCTCCTTCCCGCCCTCCCTCCCTCCCTCCCTCC
CTCCCTTCCTATCAAATTCCTTCACTCATATATCCCTTTTCGCTCCTCCC
TCCTTCCCTCCTTCCCTCCCTCCCTCAGGTCTCCACGTCCCTCTCGGGTG
TCTTGATGGGTATCCCTTCCATCACATACATCATCGCTGCCCCTCTGGGC
GGATGGCTCGGGGAGAAGATCGGATACAGACCCATTCTCTTCATAGGTAC
AACATCCCCTCCCTCCCCCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCGT
TACGACACTGCCCCTCCCGATGGTTGGTGATCACAGGCCTCGATCACAGG
CCTCCCTCCCTCCCTTTCTCCCTCCCTCTCTCCCTCCCTTCCTTCCTCCT
CCTCCTCTCGGAGCTTATTTCGCCTCTCCTTCTCCCCCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCTTCCAGGCTTCGTCCTC
TTCTCCATTTCCCTCGTCTTTCTGGGTCCAATGCCCCTCCTCCCTAGCAA
TCTCCCCTCGGGTTTTACCTGGACTATGCAGGTAGGGAGGGAGGGAGGAA
GATGTTTACATCACTGATGGAGGGCCCTGCGACATCGCCTTTATTGTTGA
GTCGATTTCGGTCCATCCTCTTCCCCTCCTCCTTTCCTCTCGCTTTCTTT
TTCTTTGTCCTAGCCCTCATTAATGTCTGATCCCTCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCTCAGGTGTTGGCGCTGGGCCTCATGGGAGTCG
GTTCGGCGTTGGGCACCATCACCACCCTTCCTGATATGAAGCACGTCGCA
GGTCCAGGCACCACGGATATAGGTAAGGAGGGAGCGAGGGAGCGAGGGAG
CGATGGAGCGAGGGAGCGAGGGAGGGGAGGGGAGAGCGAGGGAGGGAGGA
ACGAGGGATCAGGCATCAATTAGCTTTTGGCAATGTGTATGTGCCTCCTC
GCCCTCTCTCTCACACATACTCACACTCTATATATTCCACACTCTATCGA
GACGTCTATCTCACACACACTCTCTCTACATAATTCCAGTGGCCTCGATC
TTCAGCAACGTCTGTGTACCGGCGGGGGAGGTGGTCGGGCCGCTCATCGG
GGGGGGGTTGACTGAACTCCTCGGTAACTACGCCCTTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTTCTTCTTGGGCCTGATCTAAAAATTCT
ACGCCGGGTATCTTGCCTTGATAAAGACCACGACACTTCCGACCCTCCCT
TCTTCCTTCCCTCCCTCCTACCCTTCCTCAGGCTTTCGATGGGCTTCATT
TTCGTTGGGGCTGGCCTTAGGGGCCTACGCCGTGTGCCTGGTGGTGATGG
ACATGTCGGGCACCATGCCGTGGACGCACCACCGAGATCCACGCCACGTA
AGCGAAGGGGGGAACGAGAGAGGGAAGGAGGGAGAGAAGGAAGGGGGGAA
GGGCTCTAGATATCTGCTTGGAGGCAATAAATGTCTTGCCACTCTTCTGT
ATAGTGGGTTGGCAAAAGTCTTTGACTGTCTTTGATAACTCTCACACCCC
CATACTCTCACACTCTCTCACTTGCCCACTCTTTCTCTCTCACTCTCTGT
CAATTTTCCCTCTCACCACATTCTCATCAACAGAAGCTCTCTTTAGTGCA
CTTCTCTTCCTACTCCTCCACTCCTCCCTCCCCTTCCTTTTCCTCCTCCA
CCTCCAACTCCCTCCTCGTCGCTCCTCCTCCCCATCCTGCCCCCTCTCCT
TCCTCCTTCCTTCTTGCTCCCTCCTCCTCTCACTCCCCCCCCTTGACCTG
TAGCTACTCCTCCTTTCCAGCCACGCCCGAGGAAAGCCGCCGTGGAGAGG
GAGGACGCGCGGGAGGAGAAGGAGGACGAGGACACTACCAGCAGCAGCGG
CAGCAAGAGGAGCTCTCCCCTCCTTCTTATGGAAGGAAAATGACGGAAAC
GGATGAGTGAGAGGGCGTAGAAAGGGACGCATGTACATATTTTTTTAAAA
ACGTGTATAGGTAGGAGGGCGTGGAGGGGTAGGGGAGGGGCTGTGTTGAA
TACGTATCGGTTTTGACGATTTAAAATGAAGGATTGAAATGAAAACATGC
GGAAGGTTTAC back to topCoding sequence (CDS) from alignment at scaffold_6:1199235..1201745- >mRNA_3765 ID=mRNA_3765|Name=jgi.p|Nanoce1779_2|583367|organism=Nannochloropsis oceanica|type=CDS|length=2790bp|location=Sequence derived from alignment at scaffold_6:1199235..1201745- (Nannochloropsis oceanica)
GTGTTGGCGCTGGGCCTCATGGGAGTCGGTTCGGCGTTGGGCACCATCAC
CACCCTTCCTGATATGAAGCACGTCGCAGGTCCAGGCACCACGGATATAG
GTAAGGAGGGAGCGAGGGAGCGAGGGAGCGATGGAGCGAGGGAGCGAGGG
AGGGGAGGGGAGAGCGAGGGAGGGAGGAACGAGGGATCAGGCATCAATTA
GGCTTCGTCCTCTTCTCCATTTCCCTCGTCTTTCTGGGTCCAATGCCCCT
CCTCCCTAGCAATCTCCCCTCGGGTTTTACCTGGACTATGCAGGTCTCCA
CGTCCCTCTCGGGTGTCTTGATGGGTATCCCTTCCATCACATACATCATC
GCTGCCCCTCTGGGCGGATGGCTCGGGGAGAAGATCGGATACAGACCCAT
TCTCTTCATAGGTCGTCTCTTTCCCCTTCTTCTACATCGCCTTGGGCACT
ACCCTGGCCACCAGCGGCTTCTCCTTCGTCGAGCCCGTTCTCTCCGAGCA
CCTCATGACCACACTCAACATGACGAACGAGATCAGCACGGATCCGTCTT
GGCGGCAGGTGTTGGCGCTGGGCCTCATGGGAGTCGGTTCGGCGTTGGGC
ACCATCACCACCCTTCCTGATATGAAGCACGTCGCAGGTCCAGGCACCAC
GGATATAGGTAAGGAGGGAGCGAGGGAGCGAGGGAGCGATGGAGCGAGGG
AGCGAGGGAGGGGAGGGGAGAGCGAGGGAGGGAGGAACGAGGGATCAGGC
ATCAATTAGGCTTCGTCCTCTTCTCCATTTCCCTCGTCTTTCTGGGTCCA
ATGCCCCTCCTCCCTAGCAATCTCCCCTCGGGTTTTACCTGGACTATGCA
GGTCTCCACGTCCCTCTCGGGTGTCTTGATGGGTATCCCTTCCATCACAT
ACATCATCGCTGCCCCTCTGGGCGGATGGCTCGGGGAGAAGATCGGATAC
AGACCCATTCTCTTCATAGGTCGTCTCTTTCCCCTTCTTCTACATCGCCT
TGGGCACTACCCTGGCCACCAGCGGCTTCTCCTTCGTCGAGCCCGTTCTC
TCCGAGCACCTCATGACCACACTCAACATGACGAACGAGATCAGCACGGA
TCCGTCTTGGCGGCAGGTGTTGGCGCTGGGCCTCATGGGAGTCGGTTCGG
CGTTGGGCACCATCACCACCCTTCCTGATATGAAGCACGTCGCAGGTCCA
GGCACCACGGATATAGGTAAGGAGGGAGCGAGGGAGCGAGGGAGCGATGG
AGCGAGGGAGCGAGGGAGGGGAGGGGAGAGCGAGGGAGGGAGGAACGAGG
GATCAGGCATCAATTAGGCTTCGTCCTCTTCTCCATTTCCCTCGTCTTTC
TGGGTCCAATGCCCCTCCTCCCTAGCAATCTCCCCTCGGGTTTTACCTGG
ACTATGCAGGTCTCCACGTCCCTCTCGGGTGTCTTGATGGGTATCCCTTC
CATCACATACATCATCGCTGCCCCTCTGGGCGGATGGCTCGGGGAGAAGA
TCGGATACAGACCCATTCTCTTCATAGGTCGTCTCTTTCCCCTTCTTCTA
CATCGCCTTGGGCACTACCCTGGCCACCAGCGGCTTCTCCTTCGTCGAGC
CCGTTCTCTCCGAGCACCTCATGACCACACTCAACATGACGAACGAGATC
AGCACGGATCCGTCTTGGCGGCAGGTGTTGGCGCTGGGCCTCATGGGAGT
CGGTTCGGCGTTGGGCACCATCACCACCCTTCCTGATATGAAGCACGTCG
CAGGTCCAGGCACCACGGATATAGGTAAGGAGGGAGCGAGGGAGCGAGGG
AGCGATGGAGCGAGGGAGCGAGGGAGGGGAGGGGAGAGCGAGGGAGGGAG
GAACGAGGGATCAGGCATCAATTAGGCTTCGTCCTCTTCTCCATTTCCCT
CGTCTTTCTGGGTCCAATGCCCCTCCTCCCTAGCAATCTCCCCTCGGGTT
TTACCTGGACTATGCAGGTCTCCACGTCCCTCTCGGGTGTCTTGATGGGT
ATCCCTTCCATCACATACATCATCGCTGCCCCTCTGGGCGGATGGCTCGG
GGAGAAGATCGGATACAGACCCATTCTCTTCATAGGTCGTCTCTTTCCCC
TTCTTCTACATCGCCTTGGGCACTACCCTGGCCACCAGCGGCTTCTCCTT
CGTCGAGCCCGTTCTCTCCGAGCACCTCATGACCACACTCAACATGACGA
ACGAGATCAGCACGGATCCGTCTTGGCGGCAGGTGTTGGCGCTGGGCCTC
ATGGGAGTCGGTTCGGCGTTGGGCACCATCACCACCCTTCCTGATATGAA
GCACGTCGCAGGTCCAGGCACCACGGATATAGGTAAGGAGGGAGCGAGGG
AGCGAGGGAGCGATGGAGCGAGGGAGCGAGGGAGGGGAGGGGAGAGCGAG
GGAGGGAGGAACGAGGGATCAGGCATCAATTAGGCTTCGTCCTCTTCTCC
ATTTCCCTCGTCTTTCTGGGTCCAATGCCCCTCCTCCCTAGCAATCTCCC
CTCGGGTTTTACCTGGACTATGCAGGTCTCCACGTCCCTCTCGGGTGTCT
TGATGGGTATCCCTTCCATCACATACATCATCGCTGCCCCTCTGGGCGGA
TGGCTCGGGGAGAAGATCGGATACAGACCCATTCTCTTCATAGGTCGTCT
CTTTCCCCTTCTTCTACATCGCCTTGGGCACTACCCTGGCCACCAGCGGC
TTCTCCTTCGTCGAGCCCGTTCTCTCCGAGCACCTCATGACCACACTCAA
CATGACGAACGAGATCAGCACGGATCCGTCTTGGCGGCAG back to top
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