Properties
| Property Name | Value |
|---|
| TranscriptId | 373204 |
| Track | FilteredModels2 |
| ProteinId | 373118 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:1197622..1198764 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3763 ID=mRNA_3763|Name=jgi.p|Nanoce1779_2|373118|organism=Nannochloropsis oceanica|type=mRNA|length=746bp
CCCTTCTTCTCAATCACGCTCCACTCAACCCTCTCTTCCCTCCAATGACT
CCTTCTCCTCTCCCCCCCCCAAAAAGGAGCCATGACGTTCCACGAGAAGC
ACCTCGATGCCTTGGTGTCCTTCTTCGGAAGCTGGGTGCCATTAGCGGAT
AAGACGGTCTACCTGACTGTGCCTGGTATGGACGAGGCACTGGCACCCTT
GGGGGCGACCCTGGGCTTCGAGATCGGCATGCTCAAGTATGTACTGGCCA
TGTTCCTTGCCTACCCGCTGTCAGGCATCCTTAATATCTTACCATCGGCC
AACGCTAAGCATGCCTTCTCCTTGGTGGTGGGCTTGTGGTACGCGCAGGA
GATTTTTGGCAACCAGTGGGTGCATTCGTTCCTCTCCTCGGCTGTGTCGT
ACCTCATAGTCTGTTTCGGCCCCCGGAAGCATATCGCTACGCTTGTCTTC
CTCTTCACCATGACGTACATGAGTGTCAGCCACCTGTACCGCCTCTACGT
AGACTACTTGGGCTGGTCGCTGGGAGGGAGGGAGGAGGGCAGGGCGGGCG
GAAGCTCACTTCAAAATCTCCTTTTGCACCGAGACACCCGACACTTTCCT
TACCCTTCCATATCTCTTCTTTCCTCCTTCTCTCTCTCCACATGATCCTG
ACGATCAAGCTCTCCTCGTTTACTGGCCATTCCTCCTTCCCTCCTTCCCT
CCTTCCCTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCC back to topprotein sequence of jgi.p|Nanoce1779_2|373118 >mRNA_3763-protein ID=mRNA_3763-protein|Name=jgi.p|Nanoce1779_2|373118|organism=Nannochloropsis oceanica|type=polypeptide|length=188bp
MTFHEKHLDALVSFFGSWVPLADKTVYLTVPGMDEALAPLGATLGFEIGM
LKYVLAMFLAYPLSGILNILPSANAKHAFSLVVGLWYAQEIFGNQWVHSF
LSSAVSYLIVCFGPRKHIATLVFLFTMTYMSVSHLYRLYVDYLGWSLGGR
EEGRAGGSSLQNLLLHRDTRHFPYPSISLLSSFSLST* back to topmRNA from alignment at scaffold_6:1197622..1198764- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3763 ID=mRNA_3763|Name=jgi.p|Nanoce1779_2|373118|organism=Nannochloropsis oceanica|type=mRNA|length=1143bp|location=Sequence derived from alignment at scaffold_6:1197622..1198764- (Nannochloropsis oceanica)
CCCTTCTTCTCAATCACGCTCCACTCAACCCTCTCTTCCCTCCAATGACT
CCTTCTCCTCTCCCCCCCCCAAAAAGGAGCCATGACGTTCCACGAGAAGC
ACCTCGATGCCTTGGTGTCCTTCTTCGGAAGCTGGGTGCCATTAGCGGAT
AAGACGGTCTACCTGACTGTGCCTGGTATGGACGAGGCACTGGCACCCTT
GGGGGCGACCCTGGGCTTCGAGATCGGCATGCTCAAGGTGAGGAAGTGAG
ACGTAACGGAGGAGGGAGGGAGGGGGGAACGGATTCATGTAAGGAGGCTT
TGGTGATTAATTTGTGCTTATTTGCAAATATAGTACTACGTGGAGGGCCT
CTGAACGTTCAAGGCGATCTCGCTCATCTATCCTTTCTCCCTCCCTCCCT
CCCTCTCTCCCTGCTTCCCCCACACCCACTGTAGTATGTACTGGCCATGT
TCCTTGCCTACCCGCTGTCAGGCATCCTTAATATCTTACCATCGGCCAAC
GCTAAGCATGCCTTCTCCTTGGTGGTGGGCTTGTGGTACGCGCAGGAGAT
TTTTGGCAACCAGGTAGGGAGCGGTCGAGGGAGGGAGGGAGGGAGGAGGG
ATGGGAAGGGGGGAAGGGAGGGAAAGGGGAGCAACAGATGTTGAATATTG
AGATTAATTCATCATGCGTGTATGTAGCTAGCAGCCGTTCGATCTTCCAA
CCGTCCCCTTCCGCCCTCCCTCCCTTCTCCCTCAGTGGGTGCATTCGTTC
CTCTCCTCGGCTGTGTCGTACCTCATAGTCTGTTTCGGCCCCCGGAAGCA
TATCGCTACGCTTGTCTTCCTCTTCACCATGACGTACATGAGTGTCAGCC
ACCTGTACCGCCTCTACGTAGACTACTTGGGCTGGTCGCTGGTAGGGAGG
GAGGGAGGGAGGAAGGGAGGGAGGGAGGGAGGAGGGCAGGGCGGGCGGAA
GCTCACTTCAAAATCTCCTTTTGCACCGAGACACCCGACACTTTCCTTAC
CCTTCCATATCTCTTCTTTCCTCCTTCTCTCTCTCCACATGATCCTGACG
ATCAAGCTCTCCTCGTTTACTGGCCATTCCTCCTTCCCTCCTTCCCTCCT
TCCCTCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCC back to topCoding sequence (CDS) from alignment at scaffold_6:1197622..1198764- >mRNA_3763 ID=mRNA_3763|Name=jgi.p|Nanoce1779_2|373118|organism=Nannochloropsis oceanica|type=CDS|length=2256bp|location=Sequence derived from alignment at scaffold_6:1197622..1198764- (Nannochloropsis oceanica)
GGAGGGAGGGAGGAGGGCAGGGCGGGCGGAAGCTCACTTCAAAATCTCCT
TTTGCACCGAGACACCCGACACTTTCCTTACCCTTCCATATCTCTTCTTT
CCTCCTTCTCTCTCTCCACATGATGGGTGCATTCGTTCCTCTCCTCGGCT
GTGTCGTACCTCATAGTCTGTTTCGGCCCCCGGAAGCATATCGCTACGCT
TGTCTTCCTCTTCACCATGACGTACATGAGTGTCAGCCACCTGTACCGCC
TCTACGTAGACTACTTGGGCTGGTCGCTGTATGTACTGGCCATGTTCCTT
GCCTACCCGCTGTCAGGCATCCTTAATATCTTACCATCGGCCAACGCTAA
GCATGCCTTCTCCTTGGTGGTGGGCTTGTGGTACGCGCAGGAGATTTTTG
GCAACCAGATGACGTTCCACGAGAAGCACCTCGATGCCTTGGTGTCCTTC
TTCGGAAGCTGGGTGCCATTAGCGGATAAGACGGTCTACCTGACTGTGCC
TGGTATGGACGAGGCACTGGCACCCTTGGGGGCGACCCTGGGCTTCGAGA
TCGGCATGCTCAAGGGAGGGAGGGAGGAGGGCAGGGCGGGCGGAAGCTCA
CTTCAAAATCTCCTTTTGCACCGAGACACCCGACACTTTCCTTACCCTTC
CATATCTCTTCTTTCCTCCTTCTCTCTCTCCACATGATGGGTGCATTCGT
TCCTCTCCTCGGCTGTGTCGTACCTCATAGTCTGTTTCGGCCCCCGGAAG
CATATCGCTACGCTTGTCTTCCTCTTCACCATGACGTACATGAGTGTCAG
CCACCTGTACCGCCTCTACGTAGACTACTTGGGCTGGTCGCTGTATGTAC
TGGCCATGTTCCTTGCCTACCCGCTGTCAGGCATCCTTAATATCTTACCA
TCGGCCAACGCTAAGCATGCCTTCTCCTTGGTGGTGGGCTTGTGGTACGC
GCAGGAGATTTTTGGCAACCAGATGACGTTCCACGAGAAGCACCTCGATG
CCTTGGTGTCCTTCTTCGGAAGCTGGGTGCCATTAGCGGATAAGACGGTC
TACCTGACTGTGCCTGGTATGGACGAGGCACTGGCACCCTTGGGGGCGAC
CCTGGGCTTCGAGATCGGCATGCTCAAGGGAGGGAGGGAGGAGGGCAGGG
CGGGCGGAAGCTCACTTCAAAATCTCCTTTTGCACCGAGACACCCGACAC
TTTCCTTACCCTTCCATATCTCTTCTTTCCTCCTTCTCTCTCTCCACATG
ATGGGTGCATTCGTTCCTCTCCTCGGCTGTGTCGTACCTCATAGTCTGTT
TCGGCCCCCGGAAGCATATCGCTACGCTTGTCTTCCTCTTCACCATGACG
TACATGAGTGTCAGCCACCTGTACCGCCTCTACGTAGACTACTTGGGCTG
GTCGCTGTATGTACTGGCCATGTTCCTTGCCTACCCGCTGTCAGGCATCC
TTAATATCTTACCATCGGCCAACGCTAAGCATGCCTTCTCCTTGGTGGTG
GGCTTGTGGTACGCGCAGGAGATTTTTGGCAACCAGATGACGTTCCACGA
GAAGCACCTCGATGCCTTGGTGTCCTTCTTCGGAAGCTGGGTGCCATTAG
CGGATAAGACGGTCTACCTGACTGTGCCTGGTATGGACGAGGCACTGGCA
CCCTTGGGGGCGACCCTGGGCTTCGAGATCGGCATGCTCAAGGGAGGGAG
GGAGGAGGGCAGGGCGGGCGGAAGCTCACTTCAAAATCTCCTTTTGCACC
GAGACACCCGACACTTTCCTTACCCTTCCATATCTCTTCTTTCCTCCTTC
TCTCTCTCCACATGATGGGTGCATTCGTTCCTCTCCTCGGCTGTGTCGTA
CCTCATAGTCTGTTTCGGCCCCCGGAAGCATATCGCTACGCTTGTCTTCC
TCTTCACCATGACGTACATGAGTGTCAGCCACCTGTACCGCCTCTACGTA
GACTACTTGGGCTGGTCGCTGTATGTACTGGCCATGTTCCTTGCCTACCC
GCTGTCAGGCATCCTTAATATCTTACCATCGGCCAACGCTAAGCATGCCT
TCTCCTTGGTGGTGGGCTTGTGGTACGCGCAGGAGATTTTTGGCAACCAG
ATGACGTTCCACGAGAAGCACCTCGATGCCTTGGTGTCCTTCTTCGGAAG
CTGGGTGCCATTAGCGGATAAGACGGTCTACCTGACTGTGCCTGGTATGG
ACGAGGCACTGGCACCCTTGGGGGCGACCCTGGGCTTCGAGATCGGCATG
CTCAAG back to top
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