Properties
| Property Name | Value |
|---|
| TranscriptId | 525893 |
| Track | FilteredModels2 |
| ProteinId | 525807 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:1193446..1194668 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3762 ID=mRNA_3762|Name=jgi.p|Nanoce1779_2|525807|organism=Nannochloropsis oceanica|type=mRNA|length=576bp
TACAGCAAGTACTCGTACTACACTACGCTAGGCCTGTACGCGCTCTCCTT
TCCCGGCCTCATCTCCCTTGTCACACGCTCCGTAAAGAGTAAGGACGTCC
GTCGTACCTTCGAGGCACCGGGGCCCAATGCTAAGGAGGGAAAGGGGAAG
GAGCTGAAGGTGGTGGCGGGGGAGGTGATGGCATATTTCTTGAGCCAAAA
CTATCAGATTTCGGAGAATAAGGGGAGCGCCGTCACGTTCAAGGGCGTGG
TGGGGAAGAGCAAGAGCCAGGCTTTTTTCCTCACCTTCTGCACCTTTATG
GGCCTCATCTCCCTAGCCCTCGTCTTGTCCATCCAGTTCCAGGAGATTGG
AGAAAAGTGGTTTTATATTACCCTCGCCTCTCCATACGCGGGCGTGTTTT
ACTGGCAGCGTGCTGCGCGAGAGGACACTGTCACGGTCTCCCTCGAGACA
CCCGACGATGAAGTGACCAACATCGTGGCCGTAGGGAACAAGGAGGAGCT
AGAGCGGATGGCCACCACCCTCAACTACGGAGAGAAGGGGATGGTCCGCG
TACAGGGCATTTTCGAGTCGACTTAA back to topprotein sequence of jgi.p|Nanoce1779_2|525807 >mRNA_3762-protein ID=mRNA_3762-protein|Name=jgi.p|Nanoce1779_2|525807|organism=Nannochloropsis oceanica|type=polypeptide|length=192bp
YSKYSYYTTLGLYALSFPGLISLVTRSVKSKDVRRTFEAPGPNAKEGKGK
ELKVVAGEVMAYFLSQNYQISENKGSAVTFKGVVGKSKSQAFFLTFCTFM
GLISLALVLSIQFQEIGEKWFYITLASPYAGVFYWQRAAREDTVTVSLET
PDDEVTNIVAVGNKEELERMATTLNYGEKGMVRVQGIFEST* back to topmRNA from alignment at scaffold_6:1193446..1194668+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3762 ID=mRNA_3762|Name=jgi.p|Nanoce1779_2|525807|organism=Nannochloropsis oceanica|type=mRNA|length=1223bp|location=Sequence derived from alignment at scaffold_6:1193446..1194668+ (Nannochloropsis oceanica)
TACAGCAAGTACTCGTACTACACTACGCTAGGCCTGTACGCGCTCTCCTT
TCCCGGCCTCATCTCCCTTGTCACACGCTCCGTAAAGAGTAAGGACGTCC
GTCGTACCTTCGAGGCACCGGGGCCCAATGCTAAGGAGGGAAAGGGGAAG
GAGCTGAAGGTGGTGGCGGGGGAGGTGATGGCATATTTCTTGAGCCAAAA
CTATCAGGTAAAGGAGGGAAGGAAGGAAGGAGGGAGGGAGGAAGGGAGGA
AGGGAGGAAGGGAGGGAGAGAGGGAGAGAGGGAGAGAGGGAGAGAGGGAG
AGAGGGAGAGAGGGAGAGAGAGAGGGAGAGAGGGAGGGAGGGAGGGAGGG
AGGGATAAAGGACATTTTGGCAAACGTCGACATTCTGCATTTTCCCCTCC
CATCCTCTGTATTTTTGCATTTTCCCCTCTCATCCTATGTATTTCTGCAT
TTTTACCTCCCATCCTCTGTCCCTCCCTCCTTCCCCTCTTCCGCAGATTT
CGGAGAATAAGGGGAGCGCCGTCACGTTCAAGGGCGTGGTGGGGAAGAGC
AAGAGCCAGGCTTTTTTCCTCACCTTCTGCACCTTTATGGGCCTCATCTC
CCTAGCCCTCGTCTTGTCCATCCAGTTCCAGGAGATTGGAGAAAAGTGGT
TTTATATTACCCTCGCCTCTCCATACGCGTGAGTGCCCTCCCTCCCTCCC
TCCCTCCTTCCGTTCGTCCCTCCCTCCCTTCCTCCCTCGTCTTGCTGGCT
GACGTTTCACCTTCTCCTAACCCTCCCCCCCTCCTTCCTCCTCCCATTCC
TCCCCCCTTTGCTCTTCTCTTTAATCCCTAGGGGCGTGTTTTACTGGCAG
CGTGCTGCGCGAGAGGACACTGTCACGGTCTCCCTCGAGACACCCGACGA
TGTAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGGAGTGAGG
GAGGGACCGGGGACAGAAGGAATGAGGGGAGGGAGAAGGCGGGGCTAAGA
GGCTCACTCTGTCTAGGGTGATACGAAAATCCTTCATCCACCCACTTTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCAG
ACCGAGGAAGTGACCAACATCGTGGCCGTAGGGAACAAGGAGGAGCTAGA
GCGGATGGCCACCACCCTCAACTACGGAGAGAAGGGGATGGTCCGCGTAC
AGGGCATTTTCGAGTCGACTTAA back to topCoding sequence (CDS) from alignment at scaffold_6:1193446..1194668+ >mRNA_3762 ID=mRNA_3762|Name=jgi.p|Nanoce1779_2|525807|organism=Nannochloropsis oceanica|type=CDS|length=2304bp|location=Sequence derived from alignment at scaffold_6:1193446..1194668+ (Nannochloropsis oceanica)
TACAGCAAGTACTCGTACTACACTACGCTAGGCCTGTACGCGCTCTCCTT
TCCCGGCCTCATCTCCCTTGTCACACGCTCCGTAAAGAGTAAGGACGTCC
GTCGTACCTTCGAGGCACCGGGGCCCAATGCTAAGGAGGGAAAGGGGAAG
GAGCTGAAGGTGGTGGCGGGGGAGGTGATGGCATATTTCTTGAGCCAAAA
CTATCAGATTTCGGAGAATAAGGGGAGCGCCGTCACGTTCAAGGGCGTGG
TGGGGAAGAGCAAGAGCCAGGCTTTTTTCCTCACCTTCTGCACCTTTATG
GGCCTCATCTCCCTAGCCCTCGTCTTGTCCATCCAGTTCCAGGAGATTGG
AGAAAAGTGGTTTTATATTACCCTCGCCTCTCCATACGCGGGCGTGTTTT
ACTGGCAGCGTGCTGCGCGAGAGGACACTGTCACGGTCTCCCTCGAGACA
CCCGACGATGAAGTGACCAACATCGTGGCCGTAGGGAACAAGGAGGAGCT
AGAGCGGATGGCCACCACCCTCAACTACGGAGAGAAGGGGATGGTCCGCG
TACAGGGCATTTTCGAGTCGACTTAATACAGCAAGTACTCGTACTACACT
ACGCTAGGCCTGTACGCGCTCTCCTTTCCCGGCCTCATCTCCCTTGTCAC
ACGCTCCGTAAAGAGTAAGGACGTCCGTCGTACCTTCGAGGCACCGGGGC
CCAATGCTAAGGAGGGAAAGGGGAAGGAGCTGAAGGTGGTGGCGGGGGAG
GTGATGGCATATTTCTTGAGCCAAAACTATCAGATTTCGGAGAATAAGGG
GAGCGCCGTCACGTTCAAGGGCGTGGTGGGGAAGAGCAAGAGCCAGGCTT
TTTTCCTCACCTTCTGCACCTTTATGGGCCTCATCTCCCTAGCCCTCGTC
TTGTCCATCCAGTTCCAGGAGATTGGAGAAAAGTGGTTTTATATTACCCT
CGCCTCTCCATACGCGGGCGTGTTTTACTGGCAGCGTGCTGCGCGAGAGG
ACACTGTCACGGTCTCCCTCGAGACACCCGACGATGAAGTGACCAACATC
GTGGCCGTAGGGAACAAGGAGGAGCTAGAGCGGATGGCCACCACCCTCAA
CTACGGAGAGAAGGGGATGGTCCGCGTACAGGGCATTTTCGAGTCGACTT
AATACAGCAAGTACTCGTACTACACTACGCTAGGCCTGTACGCGCTCTCC
TTTCCCGGCCTCATCTCCCTTGTCACACGCTCCGTAAAGAGTAAGGACGT
CCGTCGTACCTTCGAGGCACCGGGGCCCAATGCTAAGGAGGGAAAGGGGA
AGGAGCTGAAGGTGGTGGCGGGGGAGGTGATGGCATATTTCTTGAGCCAA
AACTATCAGATTTCGGAGAATAAGGGGAGCGCCGTCACGTTCAAGGGCGT
GGTGGGGAAGAGCAAGAGCCAGGCTTTTTTCCTCACCTTCTGCACCTTTA
TGGGCCTCATCTCCCTAGCCCTCGTCTTGTCCATCCAGTTCCAGGAGATT
GGAGAAAAGTGGTTTTATATTACCCTCGCCTCTCCATACGCGGGCGTGTT
TTACTGGCAGCGTGCTGCGCGAGAGGACACTGTCACGGTCTCCCTCGAGA
CACCCGACGATGAAGTGACCAACATCGTGGCCGTAGGGAACAAGGAGGAG
CTAGAGCGGATGGCCACCACCCTCAACTACGGAGAGAAGGGGATGGTCCG
CGTACAGGGCATTTTCGAGTCGACTTAATACAGCAAGTACTCGTACTACA
CTACGCTAGGCCTGTACGCGCTCTCCTTTCCCGGCCTCATCTCCCTTGTC
ACACGCTCCGTAAAGAGTAAGGACGTCCGTCGTACCTTCGAGGCACCGGG
GCCCAATGCTAAGGAGGGAAAGGGGAAGGAGCTGAAGGTGGTGGCGGGGG
AGGTGATGGCATATTTCTTGAGCCAAAACTATCAGATTTCGGAGAATAAG
GGGAGCGCCGTCACGTTCAAGGGCGTGGTGGGGAAGAGCAAGAGCCAGGC
TTTTTTCCTCACCTTCTGCACCTTTATGGGCCTCATCTCCCTAGCCCTCG
TCTTGTCCATCCAGTTCCAGGAGATTGGAGAAAAGTGGTTTTATATTACC
CTCGCCTCTCCATACGCGGGCGTGTTTTACTGGCAGCGTGCTGCGCGAGA
GGACACTGTCACGGTCTCCCTCGAGACACCCGACGATGAAGTGACCAACA
TCGTGGCCGTAGGGAACAAGGAGGAGCTAGAGCGGATGGCCACCACCCTC
AACTACGGAGAGAAGGGGATGGTCCGCGTACAGGGCATTTTCGAGTCGAC
TTAA back to top
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