Properties
| Property Name | Value |
|---|
| TranscriptId | 629202 |
| Track | FilteredModels2 |
| ProteinId | 629116 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:1184313..1187677 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3759 ID=mRNA_3759|Name=jgi.p|Nanoce1779_2|629116|organism=Nannochloropsis oceanica|type=mRNA|length=1331bp
CCCCCCCCCCCCCGCAAGGCTCCATACTCTTTGCTCACCCTCCAGAATCA
TGGCCTTCACCAACTCCTCCTCCTCTGCCTCCTCCTTCTCCTCCTCGTCG
TCCTTCTCGTCCGCCTACCCTTCGACCGCCTCCCTCAAACTGGACAAGGG
CATGCTCGCCCGCGCCACCGCCAGTGAGGACAGCCCCACCCCTGGGTATA
TGTATGGAGAGATAAGCAAGATGACTCTCATATCCTACGAATCCTGCAAG
GAAGTAGAAGACTTCCTGCTAGGGCGGTTGAAACGGAACCAGCACAACGT
GAAATTCAAGGTCTTGCAAATAATCAAACACGTCTGTCGGCGGGGGCGCG
CTGATTTCAAGAGAGACATGCAAAGACAAGCAGAAGCCATCCGCACCTGT
CTTCAATATCGAGGACCTCCTGACCCCCTACGCGGTGAAGAGATCTACAA
ACGAGTGCATGAAGCTGCCAAGGAAGCACTCGAAGCCGTTTACGAGACCG
TCCATGACTCCTCTGCCTCCTCCTCTGCCTCCTCCTCCCTCCACTCCTCC
TCTTCCTCCATTCCCCCCCAGCGCATTCAAGGCTTCGGATCCGATCCTTC
TCCCGCTCCCTATCACTACCCAGGCAGCGATGGGGCGGGAGGGGGGGGAA
ATGGGGGTGTCTTGGCGCGTGCCAAGGCCCTGGCAGTCATTGAGGCACTC
ATCCGTCACGCTTCCTCCTCCCCTCCCTCCCCCGCCCCCTCCCTACCGCA
CGAGTACTTCGATTTTTTCGTCGACAACGTGGGCGAGCTGGAGGCGTTGA
GGGACGTGGAGGTCAAGACCGTCGTTCGGGACAAGGCGAACAAAATCCTC
TTGTTGCTAGGGAAGGAGGGGGACAATGATGGTAGTGGTAGTGGTGGTGG
TGGTGCGGGTCAGGGAGGGGGGAGAATGATGGTCGCGAGGTCTCCACCTG
AGGCCCGGCAGGCCACTTTGTTGGATTTTGAGGGGGAGGAGGAGAAGGAG
GGGGAGAAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGAGGAGGAAGGAGG
GAGGCAGGGAGGGTTGAGAAGGAGTAGTATTAAGGGGTTGTTCCACGACA
TGCAGAAGAAAGTCACAGCCGTAGCCAGAGAGAAAGAGAAGGAGGCTATG
AAGCAAAGAGCACAAATGGCGTCCTGCTGGGATACGGAGCGATAGAAAGA
AAAATCGAGATATACAACACAGTTCTTTTCTCTGTAGCTATTCTACAAAA
TCAGAACTATCGAGAATATAGGCAACAGATGCCCCCCCCACCGTGATAAA
GAACGGACGATCTCGACCCAAGAGTAAAAAG back to topprotein sequence of jgi.p|Nanoce1779_2|629116 >mRNA_3759-protein ID=mRNA_3759-protein|Name=jgi.p|Nanoce1779_2|629116|organism=Nannochloropsis oceanica|type=polypeptide|length=382bp
MAFTNSSSSASSFSSSSSFSSAYPSTASLKLDKGMLARATASEDSPTPGY
MYGEISKMTLISYESCKEVEDFLLGRLKRNQHNVKFKVLQIIKHVCRRGR
ADFKRDMQRQAEAIRTCLQYRGPPDPLRGEEIYKRVHEAAKEALEAVYET
VHDSSASSSASSSLHSSSSSIPPQRIQGFGSDPSPAPYHYPGSDGAGGGG
NGGVLARAKALAVIEALIRHASSSPPSPAPSLPHEYFDFFVDNVGELEAL
RDVEVKTVVRDKANKILLLLGKEGDNDGSGSGGGGAGQGGGRMMVARSPP
EARQATLLDFEGEEEKEGEKEEEKEEEKEEEEGGRQGGLRRSSIKGLFHD
MQKKVTAVAREKEKEAMKQRAQMASCWDTER* back to topmRNA from alignment at scaffold_6:1184313..1187677+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3759 ID=mRNA_3759|Name=jgi.p|Nanoce1779_2|629116|organism=Nannochloropsis oceanica|type=mRNA|length=3365bp|location=Sequence derived from alignment at scaffold_6:1184313..1187677+ (Nannochloropsis oceanica)
CCCCCCCCCCCCCGCAAGGCTCCATACTCTTTGCTCACCCTCCAGAATCA
TGGCCTTCACCAACTCCTCCTCCTCTGCCTCCTCCTTCTCCTCCTCGTCG
TCCTTCTCGTCCGCCTACCCTTCGACCGCCTCCCTCAAACTGGACAAGGG
CATGCTCGCCCGCGCCACCGCCAGTGAGGACAGCCCCACCCCTGGGTATA
TGTATGGAGAGATAAGCAAGATGACTCTCATATCCTACGAATCCTGCAAG
GAAGTAGAAGACTTCCTGCTAGGGCGGTTGAAACGGAACCAGCACAACGT
GAAATTCAAGGTCTTGCAAATAATCAAACACGTCTGTCGGCGGGGGCGCG
CTGATTTCAAGAGAGACATGCAAAGACAAGCAGAAGCCATCCGCACCTGT
CTTCAATATCGAGGACCTCCTGACCCCCTACGCGGTGAAGAGATCTACAA
ACGAGTGCATGAAGCTGCCAAGGAAGCACTCGAAGCCGTTTACGAGACCG
TCCATGACTCCTCTGCCTCCTCCTCTGCCTCCTCCTCCCTCCACTCCTCC
TCTTCCTCCATTCCCCCCCAGCGCATTCAAGGCTTCGGATCCGATCCTTC
TCCCGCTCCCTATCACTACCCAGGCAGCGATGGGGCGGGAGGGGGGGGAA
ATGGGGGTGTCTTGGGTAAGCAAATTGGGCCATCAGGTAGTATGGGCTCG
ATGAGTGACCTGGCATCATCAGTAGTGGGTGCCATGACGGCCAAAGTGGC
GGCTGCCGCCGCTGCCGCCGCTGCTGCTGCTGCTGCAGCTGGCGCTGGTG
GTGGGGGACGGGTGAGGACTGCGGGGGGAGGGGCGGGGTCAGGGCTGACT
GGAGGCTACGTTGGCCCTCCGGGAGAGGGGGGAGGAGGGGGTGGGGAATG
TGGAAGATATGGAGGTGGGGGAGGGGGAATGGCAGGGATGGGGAACCCAG
CGTTCGAGGACCCGCGGCGAGGACGAGGAGGGAGGACATTGTTGGAGAAG
GCGGGAGAGATAGTACGGGCGCAGATCGGCACGGTGGTCAACACTTCCTC
CTTCCCTTCCTCCTCCTCGTCCTCCTCCTCCTTGCAGCGGGTGACTTTTG
CGGCGCCGCCCGATCGTAGATATGCTAGTGTAGGAGGAGGAGGAAGAGGG
CAAGAGGGGGGGCATGCCACACCGACGGCGACCAGCTACTGCGGCGGGGC
CTTGTCGCCAGCCTTCCCAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGGAGCAGCAGGAGCAGGAGCAGGAGCAGCAGCCGCAGCAGCCGCAGCAG
CAGCTGCTGCAGCAGCAGCAGCAGGAGCAGCAGCACGAGCAGGAGCAGAA
GACAGCTGGAGCTTATGGCGGGTGGCACGAGGATAGCCGTAGAGGAGAAG
GTGGAGGAGGAGGGGATGGAGGCAGCAGGTGGCGGCAGCCGGGAGGTGTG
GGTGGGGTGTGGGGTGTGGCTGCGGCGACGAGAGGGGGAGGAGGCTGGCA
ACAAACTCCTTCCTCGTCCCTCCAACCGTCACAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAAGTAGGGCGTGTGGGCGGTGCAGCC
ACCGATGGGGCCTACGAACGGCGTCTCGTCCTCGAGCTATGTGCGCCGGG
GGGGACGCGTGCCCTCCCTCCCCCCGAAGAGTTGCAGGCCTTCCTCCTCG
CTGCCGGCACTCTGGACGTGGACCTCGTGGGAGGGATTCTCCTCGATCAA
GTCTCCTCCTCCCCTTCCTCCCTCCCGTCCTCCCCCTCGACCTCTTGGCA
AGCGCGTGCCAAGGCCCTGGCAGTCATTGAGGCACTCATCCGTCACGCTT
CCTCCTCCCCTCCCTCCCCCGCCCCCTCCCTACCGCACGAGTACTTCGAT
TTTTTCGTCGACAACGTGGGCGAGCTGGAGGCGTTGAGGGACGTGGAGGT
CAAGACCGTCGTTCGGGACAAGGCGAACAAAATCCTCTTGTTGCTAGGGA
AGGAGGGGGACAATGATGGTAGTGGTAGTGGTGGTGGTGGTGCGGGTCAG
GGAGGGGGGAGAATGATGGTCGCGAGGTCTCCACCTGAGGCCCGGCAGGC
CACTTTGTTGGATTTTGAGGGGGAGGAGGAGAAGGAGGGGGAGAAGGAGG
AGGAGAAGGAGGAGGAGAAGGAGGAGGAGGAAGGAGGGAGGCAGGGAGGG
TTGAGAAGGAGTAGTATTAAGGGGTTGTTCCACGACATGCAGGTGAAGAC
GGGAGATGCTACTACCATCAGCGCAGCTCCGCCGCCGACGACGATGGGAA
GCAGAATGACAGCAGCAGAAGCCGCAGCAGCAGTAGGGGCAGCAACAGCA
GAAGCAGCAGCGTCAGGCCCACCTACTTCTCTGCTGGAGGACATGAATCT
CTCCTCTTCTTCTTCTTCCTCTTCGTCCTCCATTCCACAACAAGGAAATA
GCAGCACCGCCACTCTTCCCCAAAGCATCAACAAGAAAAACATTAGCAAC
AACAACAGCAAGCTCAATAGTGACAGCACCAGCAACAGCACCAGCAGCTA
CAGCGACGACCTCTTAATCGTCGGAAGCACACCTCCACCAATGACGACCA
ACCCTCTCCGCGCTTTCGACCCCCTCTCATCCAGCAATCGACTGACCCCT
CCCTCCCTCCCCTCCTCCCTTCCCCCCACATCCCACCCCTTCTTAATGAT
GACGGCCACACCTCCCTCGCATGGTAGCGGCTTCATTGGTCGGCCCATAC
CTCAAGCCCCTCCTTCCCTCCCTCCCTCCTTACCTCCCTCCCTTTCCCCC
AACCTGGGCATGATGGGGCAAGGCATGATCCCCGCCATGCAAACTCGCAC
AGTTATTCCATCTGCAATGGTGCCTGGGAATGGGAGGGAGGGAGGGCAGC
TCGTACAGGAAGGAGGAAGTAGTGCATTCAATTTTATCGGGGTGGTTGCT
GGAGGTGGAGGGGGAGGGATTACCAGAAATGGAGGAGGGGGGGAAGAAGC
TGCCTTTTCCTTCGTCAGAGATGCCATGGAAAAAAGTGGTGGGAAAAAGG
GAAAGTAGAAGACGAAAGAGTGAGGGACGAAAAGATACGTGTACGGTGGT
GAGTAGTACGAGTTACTCAGCGTGGATGTATGTACACAGAAGAAAGTCAC
AGCCGTAGCCAGAGAGAAAGAGAAGGAGGCTATGAAGCAAAGAGCACAAA
TGGCGTCCTGCTGGGATACGGAGCGATAGAAAGAAAAATCGAGATATACA
ACACAGTTCTTTTCTCTGTAGCTATTCTACAAAATCAGAACTATCGAGAA
TATAGGCAACAGATGCCCCCCCCACCGTGATAAAGAACGGACGATCTCGA
CCCAAGAGTAAAAAG back to topCoding sequence (CDS) from alignment at scaffold_6:1184313..1187677+ >mRNA_3759 ID=mRNA_3759|Name=jgi.p|Nanoce1779_2|629116|organism=Nannochloropsis oceanica|type=CDS|length=3438bp|location=Sequence derived from alignment at scaffold_6:1184313..1187677+ (Nannochloropsis oceanica)
ATGGCCTTCACCAACTCCTCCTCCTCTGCCTCCTCCTTCTCCTCCTCGTC
GTCCTTCTCGTCCGCCTACCCTTCGACCGCCTCCCTCAAACTGGACAAGG
GCATGCTCGCCCGCGCCACCGCCAGTGAGGACAGCCCCACCCCTGGGTAT
ATGTATGGAGAGATAAGCAAGATGACTCTCATATCCTACGAATCCTGCAA
GGAAGTAGAAGACTTCCTGCTAGGGCGGTTGAAACGGAACCAGCACAACG
TGAAATTCAAGGTCTTGCAAATAATCAAACACGTCTGTCGGCGGGGGCGC
GCTGATTTCAAGAGAGACATGCAAAGACAAGCAGAAGCCATCCGCACCTG
TCTTCAATATCGAGGACCTCCTGACCCCCTACGCGGTGAAGAGATCTACA
AACGAGTGCATGAAGCTGCCAAGGAAGCACTCGAAGCCGTTTACGAGACC
GTCCATGACTCCTCTGCCTCCTCCTCTGCCTCCTCCTCCCTCCACTCCTC
CTCTTCCTCCATTCCCCCCCAGCGCATTCAAGGCTTCGGATCCGATCCTT
CTCCCGCTCCCTATCACTACCCAGGCAGCGATGGGGCGGGAGGGGGGGGA
AATGGGGGTGTCTTGGCGCGTGCCAAGGCCCTGGCAGTCATTGAGGCACT
CATCCGTCACGCTTCCTCCTCCCCTCCCTCCCCCGCCCCCTCCCTACCGC
ACGAGTACTTCGATTTTTTCGTCGACAACGTGGGCGAGCTGGAGGCGTTG
AGGGACGTGGAGGTCAAGACCGTCGTTCGGGACAAGGCGAACAAAATCCT
CTTGTTGCTAGGGAAGGAGGGGGACAATGATGGTAGTGGTAGTGGTGGTG
GTGGTGCGGGTCAGGGAGGGGGGAGAATGATGGTCGCGAGGTCTCCACCT
GAGGCCCGGCAGGCCACTTTGTTGGATTTTGAGGGGGAGGAGGAGAAGGA
GGGGGAGAAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGAGGAGGAAGGAG
GGAGGCAGGGAGGGTTGAGAAGGAGTAGTATTAAGGGGTTGTTCCACGAC
ATGCAGAAGAAAGTCACAGCCGTAGCCAGAGAGAAAGAGAAGGAGGCTAT
GAAGCAAAGAGCACAAATGGCGTCCTGCTGGGATACGGAGCGATAGATGG
CCTTCACCAACTCCTCCTCCTCTGCCTCCTCCTTCTCCTCCTCGTCGTCC
TTCTCGTCCGCCTACCCTTCGACCGCCTCCCTCAAACTGGACAAGGGCAT
GCTCGCCCGCGCCACCGCCAGTGAGGACAGCCCCACCCCTGGGTATATGT
ATGGAGAGATAAGCAAGATGACTCTCATATCCTACGAATCCTGCAAGGAA
GTAGAAGACTTCCTGCTAGGGCGGTTGAAACGGAACCAGCACAACGTGAA
ATTCAAGGTCTTGCAAATAATCAAACACGTCTGTCGGCGGGGGCGCGCTG
ATTTCAAGAGAGACATGCAAAGACAAGCAGAAGCCATCCGCACCTGTCTT
CAATATCGAGGACCTCCTGACCCCCTACGCGGTGAAGAGATCTACAAACG
AGTGCATGAAGCTGCCAAGGAAGCACTCGAAGCCGTTTACGAGACCGTCC
ATGACTCCTCTGCCTCCTCCTCTGCCTCCTCCTCCCTCCACTCCTCCTCT
TCCTCCATTCCCCCCCAGCGCATTCAAGGCTTCGGATCCGATCCTTCTCC
CGCTCCCTATCACTACCCAGGCAGCGATGGGGCGGGAGGGGGGGGAAATG
GGGGTGTCTTGGCGCGTGCCAAGGCCCTGGCAGTCATTGAGGCACTCATC
CGTCACGCTTCCTCCTCCCCTCCCTCCCCCGCCCCCTCCCTACCGCACGA
GTACTTCGATTTTTTCGTCGACAACGTGGGCGAGCTGGAGGCGTTGAGGG
ACGTGGAGGTCAAGACCGTCGTTCGGGACAAGGCGAACAAAATCCTCTTG
TTGCTAGGGAAGGAGGGGGACAATGATGGTAGTGGTAGTGGTGGTGGTGG
TGCGGGTCAGGGAGGGGGGAGAATGATGGTCGCGAGGTCTCCACCTGAGG
CCCGGCAGGCCACTTTGTTGGATTTTGAGGGGGAGGAGGAGAAGGAGGGG
GAGAAGGAGGAGGAGAAGGAGGAGGAGAAGGAGGAGGAGGAAGGAGGGAG
GCAGGGAGGGTTGAGAAGGAGTAGTATTAAGGGGTTGTTCCACGACATGC
AGAAGAAAGTCACAGCCGTAGCCAGAGAGAAAGAGAAGGAGGCTATGAAG
CAAAGAGCACAAATGGCGTCCTGCTGGGATACGGAGCGATAGATGGCCTT
CACCAACTCCTCCTCCTCTGCCTCCTCCTTCTCCTCCTCGTCGTCCTTCT
CGTCCGCCTACCCTTCGACCGCCTCCCTCAAACTGGACAAGGGCATGCTC
GCCCGCGCCACCGCCAGTGAGGACAGCCCCACCCCTGGGTATATGTATGG
AGAGATAAGCAAGATGACTCTCATATCCTACGAATCCTGCAAGGAAGTAG
AAGACTTCCTGCTAGGGCGGTTGAAACGGAACCAGCACAACGTGAAATTC
AAGGTCTTGCAAATAATCAAACACGTCTGTCGGCGGGGGCGCGCTGATTT
CAAGAGAGACATGCAAAGACAAGCAGAAGCCATCCGCACCTGTCTTCAAT
ATCGAGGACCTCCTGACCCCCTACGCGGTGAAGAGATCTACAAACGAGTG
CATGAAGCTGCCAAGGAAGCACTCGAAGCCGTTTACGAGACCGTCCATGA
CTCCTCTGCCTCCTCCTCTGCCTCCTCCTCCCTCCACTCCTCCTCTTCCT
CCATTCCCCCCCAGCGCATTCAAGGCTTCGGATCCGATCCTTCTCCCGCT
CCCTATCACTACCCAGGCAGCGATGGGGCGGGAGGGGGGGGAAATGGGGG
TGTCTTGGCGCGTGCCAAGGCCCTGGCAGTCATTGAGGCACTCATCCGTC
ACGCTTCCTCCTCCCCTCCCTCCCCCGCCCCCTCCCTACCGCACGAGTAC
TTCGATTTTTTCGTCGACAACGTGGGCGAGCTGGAGGCGTTGAGGGACGT
GGAGGTCAAGACCGTCGTTCGGGACAAGGCGAACAAAATCCTCTTGTTGC
TAGGGAAGGAGGGGGACAATGATGGTAGTGGTAGTGGTGGTGGTGGTGCG
GGTCAGGGAGGGGGGAGAATGATGGTCGCGAGGTCTCCACCTGAGGCCCG
GCAGGCCACTTTGTTGGATTTTGAGGGGGAGGAGGAGAAGGAGGGGGAGA
AGGAGGAGGAGAAGGAGGAGGAGAAGGAGGAGGAGGAAGGAGGGAGGCAG
GGAGGGTTGAGAAGGAGTAGTATTAAGGGGTTGTTCCACGACATGCAGAA
GAAAGTCACAGCCGTAGCCAGAGAGAAAGAGAAGGAGGCTATGAAGCAAA
GAGCACAAATGGCGTCCTGCTGGGATACGGAGCGATAG back to top
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