Properties
| Property Name | Value |
|---|
| TranscriptId | 583122 |
| Track | FilteredModels2 |
| ProteinId | 583036 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:958445..959980 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3685 ID=mRNA_3685|Name=jgi.p|Nanoce1779_2|583036|organism=Nannochloropsis oceanica|type=mRNA|length=1536bp
ACAGTCCATGTCCCTCGCCGCCGATGGCGCGTCAGACGAGTTGTTTTTCC
TCCTTTGGGCCGAGAACGAGTGGCCCTCCTCCCGGCCGCGGCAAGAACGA
CACCATCACGCGCAGCATGCACCAGCATCGATACCCTGGTATTTACCTCA
TACTGTTGTGTACAAGGCATCGAGCCCGTGTGCTTGGTATTTTACCTCGG
CCAAGACCAGCAATATCTTGAAAAAGAGCAAGCACAACGTGCTCAGTCGG
CGCATCGAGGAGGAGTTTACCAAGCAAACCCTCGCAGGCGACATTGTTGC
ACATAATCTCACCTTGCCTAATGCTTTCCGGGAGGATGATAACCGATTCG
TTTCAGCGCAACCAGCCGCTTCCTCCTCGTCTTCCCTCCCGGCCCCTGGT
GCCGCGGGCAACGATGATGATGCACGCATTGAGTATTTCGACCGCGCTGG
CCTCCACCGTTTCCTCTTCAATCGAAGCGAGGATTGTGGCTTGTTGCAAC
AATTTATTGAACCCCAAAGGCCTCGAAATGCCATTATCCGCGCCATCTGG
TCTAATAAGCTTTGCAATGCAGAGCGTCGCGTTAATTTACATAACATCTG
GGATAGGCGCTACGGGTTGTGCGAGCGCGCTGTGACTTACGAAGGGCCAA
ATCATTACTCACAAGCGACCCCTTTGAAAGGCCAGGTTCTGTTCACGCTC
ATTCAACAGGTGTGCGAGGAATTGGTGAAGCATATTGCAGACATTACCCT
CCAGAAGCAACGCATTGCCTGATGTGTGCTCAAATTTAAGGTGGATTCCC
GCGGGCGCCTTTTTTTGGTGGTCTTCCTCCATCCGCTCCAAGACCCTATT
CCCTTGCTTCCGTCTTGTGTCATCAGCCACCTCATCCCTCGTATATGTCA
CAACACTCAAAGATGCACCAGCGACAGGAACATGGACACGAGCAGTTACA
CCAGCGATTTTCTTGTCTCGGTCCTCCTCAGAGCAAGCTTTCCCGGCCCT
TTCATGAGGACAACGAAGCCCTCAGTCTAAGCTCCCAACTCGCCCTTCCC
CTCGACATGCAGATCACCACTGCCGCCAGCCATCAGCATCACTCCCACCC
TCCTTTCTCCTTCCCGCAACCTTCTTTTTCCCAAAAGTGCCCTTCCTGCG
ATGCGAAAACTGCGCCGGGATGATTTCATGTGATAACGTACGGCATGGTG
GGACTGCTGCACGAGAAAACCATAGCTCAAGCCCGAGCCGCCTGGCGGGC
GCGGATAATAGAGGAGAAGCATAAATCGGAAAGGAAGGAAGATAATAAGG
TAGAGGAAGAGGCGCCATTGTTACAGGCGCTTCTGTCCGAGATGAGGAAT
GGTACAGCGGGAGAGACCTATCGTCGATGCAAACACGATGCCATCTTCAT
GCAAAAGCGGGTAAAGATCTGTGAGGACTGCTTCTTAAAGCACGCGGAGG
TGGCTTTTGAGCAGATTGTGCGGCAGGTTTGCAGCCAGCATCAGTCTCCG
CAGCGTCCCACTCGTTGGCGCGGGATGACCGGCAGC back to topprotein sequence of jgi.p|Nanoce1779_2|583036 >mRNA_3685-protein ID=mRNA_3685-protein|Name=jgi.p|Nanoce1779_2|583036|organism=Nannochloropsis oceanica|type=polypeptide|length=255bp
MSLAADGASDELFFLLWAENEWPSSRPRQERHHHAQHAPASIPWYLPHTV
VYKASSPCAWYFTSAKTSNILKKSKHNVLSRRIEEEFTKQTLAGDIVAHN
LTLPNAFREDDNRFVSAQPAASSSSSLPAPGAAGNDDDARIEYFDRAGLH
RFLFNRSEDCGLLQQFIEPQRPRNAIIRAIWSNKLCNAERRVNLHNIWDR
RYGLCERAVTYEGPNHYSQATPLKGQVLFTLIQQVCEELVKHIADITLQK
QRIA* back to topmRNA from alignment at scaffold_6:958445..959980+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3685 ID=mRNA_3685|Name=jgi.p|Nanoce1779_2|583036|organism=Nannochloropsis oceanica|type=mRNA|length=1536bp|location=Sequence derived from alignment at scaffold_6:958445..959980+ (Nannochloropsis oceanica)
ACAGTCCATGTCCCTCGCCGCCGATGGCGCGTCAGACGAGTTGTTTTTCC
TCCTTTGGGCCGAGAACGAGTGGCCCTCCTCCCGGCCGCGGCAAGAACGA
CACCATCACGCGCAGCATGCACCAGCATCGATACCCTGGTATTTACCTCA
TACTGTTGTGTACAAGGCATCGAGCCCGTGTGCTTGGTATTTTACCTCGG
CCAAGACCAGCAATATCTTGAAAAAGAGCAAGCACAACGTGCTCAGTCGG
CGCATCGAGGAGGAGTTTACCAAGCAAACCCTCGCAGGCGACATTGTTGC
ACATAATCTCACCTTGCCTAATGCTTTCCGGGAGGATGATAACCGATTCG
TTTCAGCGCAACCAGCCGCTTCCTCCTCGTCTTCCCTCCCGGCCCCTGGT
GCCGCGGGCAACGATGATGATGCACGCATTGAGTATTTCGACCGCGCTGG
CCTCCACCGTTTCCTCTTCAATCGAAGCGAGGATTGTGGCTTGTTGCAAC
AATTTATTGAACCCCAAAGGCCTCGAAATGCCATTATCCGCGCCATCTGG
TCTAATAAGCTTTGCAATGCAGAGCGTCGCGTTAATTTACATAACATCTG
GGATAGGCGCTACGGGTTGTGCGAGCGCGCTGTGACTTACGAAGGGCCAA
ATCATTACTCACAAGCGACCCCTTTGAAAGGCCAGGTTCTGTTCACGCTC
ATTCAACAGGTGTGCGAGGAATTGGTGAAGCATATTGCAGACATTACCCT
CCAGAAGCAACGCATTGCCTGATGTGTGCTCAAATTTAAGGTGGATTCCC
GCGGGCGCCTTTTTTTGGTGGTCTTCCTCCATCCGCTCCAAGACCCTATT
CCCTTGCTTCCGTCTTGTGTCATCAGCCACCTCATCCCTCGTATATGTCA
CAACACTCAAAGATGCACCAGCGACAGGAACATGGACACGAGCAGTTACA
CCAGCGATTTTCTTGTCTCGGTCCTCCTCAGAGCAAGCTTTCCCGGCCCT
TTCATGAGGACAACGAAGCCCTCAGTCTAAGCTCCCAACTCGCCCTTCCC
CTCGACATGCAGATCACCACTGCCGCCAGCCATCAGCATCACTCCCACCC
TCCTTTCTCCTTCCCGCAACCTTCTTTTTCCCAAAAGTGCCCTTCCTGCG
ATGCGAAAACTGCGCCGGGATGATTTCATGTGATAACGTACGGCATGGTG
GGACTGCTGCACGAGAAAACCATAGCTCAAGCCCGAGCCGCCTGGCGGGC
GCGGATAATAGAGGAGAAGCATAAATCGGAAAGGAAGGAAGATAATAAGG
TAGAGGAAGAGGCGCCATTGTTACAGGCGCTTCTGTCCGAGATGAGGAAT
GGTACAGCGGGAGAGACCTATCGTCGATGCAAACACGATGCCATCTTCAT
GCAAAAGCGGGTAAAGATCTGTGAGGACTGCTTCTTAAAGCACGCGGAGG
TGGCTTTTGAGCAGATTGTGCGGCAGGTTTGCAGCCAGCATCAGTCTCCG
CAGCGTCCCACTCGTTGGCGCGGGATGACCGGCAGC back to topCoding sequence (CDS) from alignment at scaffold_6:958445..959980+ >mRNA_3685 ID=mRNA_3685|Name=jgi.p|Nanoce1779_2|583036|organism=Nannochloropsis oceanica|type=CDS|length=765bp|location=Sequence derived from alignment at scaffold_6:958445..959980+ (Nannochloropsis oceanica)
ATGTCCCTCGCCGCCGATGGCGCGTCAGACGAGTTGTTTTTCCTCCTTTG
GGCCGAGAACGAGTGGCCCTCCTCCCGGCCGCGGCAAGAACGACACCATC
ACGCGCAGCATGCACCAGCATCGATACCCTGGTATTTACCTCATACTGTT
GTGTACAAGGCATCGAGCCCGTGTGCTTGGTATTTTACCTCGGCCAAGAC
CAGCAATATCTTGAAAAAGAGCAAGCACAACGTGCTCAGTCGGCGCATCG
AGGAGGAGTTTACCAAGCAAACCCTCGCAGGCGACATTGTTGCACATAAT
CTCACCTTGCCTAATGCTTTCCGGGAGGATGATAACCGATTCGTTTCAGC
GCAACCAGCCGCTTCCTCCTCGTCTTCCCTCCCGGCCCCTGGTGCCGCGG
GCAACGATGATGATGCACGCATTGAGTATTTCGACCGCGCTGGCCTCCAC
CGTTTCCTCTTCAATCGAAGCGAGGATTGTGGCTTGTTGCAACAATTTAT
TGAACCCCAAAGGCCTCGAAATGCCATTATCCGCGCCATCTGGTCTAATA
AGCTTTGCAATGCAGAGCGTCGCGTTAATTTACATAACATCTGGGATAGG
CGCTACGGGTTGTGCGAGCGCGCTGTGACTTACGAAGGGCCAAATCATTA
CTCACAAGCGACCCCTTTGAAAGGCCAGGTTCTGTTCACGCTCATTCAAC
AGGTGTGCGAGGAATTGGTGAAGCATATTGCAGACATTACCCTCCAGAAG
CAACGCATTGCCTGA back to top
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