Properties
Property Name | Value |
TranscriptId | 583027 |
Track | FilteredModels2 |
ProteinId | 582941 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_6 | supercontig | scaffold_6:898727..902622 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3663 ID=mRNA_3663|Name=jgi.p|Nanoce1779_2|582941|organism=Nannochloropsis oceanica|type=mRNA|length=3896bp CAGAATAAAGGGGTTGTGGCGGCGGCTGCCAATATTACCACCAGTGCAGG CAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAACAACAACA GCAGTTTTAGCAGCAGACGGGGGAAGCGAGGCTTCTTCCTTATTGATGGT GGCTATTACGAGTGGCTGCAGTGGCACATTCTTCAAGGCCGCATCGCCAC GCACGCGATCGACGTCCGTCTGTTAGTGCAGCGCCTGGAAAATATGCTGG GTTTGTCCTTTGTCCGGCGGCTCTACGTCCAGAGCACCGAGACGGGCGCC CTTGGGAATTTCCACAAAATGCTTGAGGCAACTGCGGGATTCGAGGTTGA ACTACATCGTCTAAGAGACTCACCCTCTTTGCCATCACATCGTGGCGTAG GCGTGGCGATGACAGCCCACGTGTTGAGCTCGACTTTTAAAGCTGATTTT GGTGCACTGGTGGTGCTGACAGGAGGGGCTTCGGATCTTGTTCCAGCTTT TCGGATGGCACGAGCGGAGAACGATAGTCGCTACCGTATGCGGCAACGGG TGCAGGAAGTGGTGGTTTTGGGCGGAACCCATATCAGCCCCGCCTTTTTT CCTTATCTTTATCGGCCTGTGGACGGGTCGGCATTCATTTTCGAGAGCCT CATGGCCGCGTGCGTTGTGCCCAAGAGTGAGTTGGGGCGTGGGACGGGCA GTCTTTCAATCTCTTCGTCGTCCTACCTCTCCCTGAGGCGCAAAGCCCGC TCACTCTCGCCGCCTATGGCCCGCTCAGGACAGTCCAAGAGGGGCCTTGA AAACAGTATTTCTTCTCCACCTCTTCCTTCTTCTGAAGCACCCGCCGAGG GCTTTCCGGTTTACTCCCCCTCTTTTCAGCAACTAGATAATCGCAACCCT ACGGCGTACAGTATGGGCAGACTTGCGGGTAGCCCTCGCCATTCTGCGAC CACGAGTGACGTAAGTCTCAATCTGAGCCTGAGCAACAGCAACAGCAGCG GTAGCGGTAGTGGGAGTTGTGGCAGCAGCGTTAGCGTTGGCGTTGCGGGT GTTGGGGGTCGTCCTCGGCGATGGTGCAATTTTGGGCATCGCTGCAAATA TTTTGAGGATGTAGAGACTAATTTCGTGCATTTTCAGCGCTTTGCACACG TGTGCCAGCATGACACTCAGTGCCCTTTCGTTCTGAACTATGCCGTGCAC CGGTCGACAGAGGAAGGGAGGGCGCATTTTCTCATGTGGAAGCACTCGTG TCCGCATGGCTTGGATTGCCAGTACTTCGCGCAGCCTGACAAACACCGCC GACACATCGAGTTTTTTACACATAAGGCTAAGGTTCTCAATGCGGCGGCC GCAGCCGTGGCTCAACAGCAACAGCAGCAGCAGCAGCAACAACAACAACA ACAACAGGCACAGCAGCAGCAGCAGGCGCACCAGCGTCAGCGACTGGTGC TCCAGGACCACCATCTTGCCGCCTTGTCCCTTTCTCCACCGGCCTCCCCC CTCCATGCCATGGCTCCTAGAACACCGCTATCCTTGCCTGCCAGTCTGAA TGAGACGGAGTCGTTGCTCAGCCGATTCGCCGGGGATTGGGACCCGGAGA TGGTTTCCCAAATGCTACAACAGCATAATCAGCAGCAGAGCCACTATCAC CACCACCAACAGCAGATTCTGATTCCCCGACCGCCTAGGCTGCACACACA ACACTCCTCCACCCTCACCCACTCCTCCACTTCTTCTGATACCCAGAACT ACCCCCTGCTTGTTTCGGGTAGCTCGGGCGTGGAAGACGAGGTGAGTAGC CAGAGTAGTTCTAGCGCGGCCACCAGCCCTTCGATGTCCCCAAATACTGG CACATCGAACTTCTGGTAGTATGGGCTGTGTGTGGATATATTATTCGTTT GGCTGATGATCTAGATAGTTAAGGAATGCTTTTGTGGTAATTCCAGCCAG GAACAAGAACAAGGAATGGCGTGGGGGCCGGTTTATTGAATGGATTTTCA AACGAATTGACAGGAAGATGAGCGAGTATTTGTGGTCATTTTGTAGATAC GTCATAATAGGATTTTTAATATGATATGAACACTGTGGTTTTGTTTCGTC CTTCGTGGTAGACTTCATTGAGACCTTGCGAGGAGAAGCATACATCGCGA GGGAAAACTCAAAGCAATCTTCCTCACACCAAACAAGGCTGCTTTGAAAT TCACACGCATTCCGAATCGCAAATACGGACATAGAAGAGAGGAAGGGAGG AAAGTAGCATTCTGGCTACATTACAAAATTTAGCATGACTCAAATTATCA TAGGATAAAGATTGAGTCAAGCACATTACCTCAAACACAACACAATTCTT TCCCTTCAAAATGATGGAAAAGAAAATGCGTTATCCAAAGTACGGTTTTA CAAAAGAAGATAAACCTAACACAAGCATGACATAGAGAGATGACGGCATG GTCCGCAAATGAAGCGTGTCCTCCACCTTCTTTCGGTGTAATCCAATAAA CATGAGAGAAACCTTTACTCCCAGGAGGAAAAAGTCTGAGAAAGCTTTGA TGTTTTTTCAGTCCCATGAGATTCCACCAGCTTTCAAGCAAAGGTTGTCA GCACGTAGCAAAATAGATGACATGAAGAACTGATATATAGCAAAAATTAA GAGAAAAATACGATACCAAAATTTGCACAAGGTAGCTTTTCATTTGGTTT CCTCATTTTTGGCATATAACACACGTAGTGCCAGACAAACACGGAAACAC AAGAGCAACCGATCTATACGCCGACCAACCACGACGGTTGGGCCGAGTCA CGGCTCCCACTATTCCCCTTGCCCACCACTGAGTACTGAGCCTGGTGGGT TTGGGGATTCCAGGTCTCGGCGGGCGAGCGCGTGGAGTGAGGTGTCGCTA CCTTTGCCCCCATCATAAGTGGATTGGTGCCAGGGGAGCTGCTTGCACGA TAGCTGTTGTTGCGGACGTTCCCGGCTAGGTGGTGATTGTTGTAGCCGCC CACAAGCTGGACCTCAACTTCTTCAGCGTCGTTATTGTCATTGTAGTGGG CAAGGCGCCACAAAGTGAGAGCGAGGAAGAGAGCGAGCACCGCTGAGCTC AACACGGCAATCCACGCGTAGTAAAGACCCACGACCCTCAAGCCGTCTCC CGTTTGTTTCACGCAACCATCGACAGTGCAAAAGACGTGGAAAGCATCAG GACGAATTAATTTCCAAGCAATCGCGGCAAGGGAACTAAAGATGCACTGA GGAATGGCAGCATAAGCCGAATACCGCATGTACTTGGAGTTCCCGTCCGC AGTACGCGCACATTTTGCCCTAAGGTGAGCAAGGAAGACACCCATCCCAG TTACAGTAGCCACAGCCATACAGCATTGCACGAGAAGAAGGAGGGTGTAG GGCAAGATGTCGCCTCCCTGGGCCATATTCCAGCTTGCGTACCCAACTGT GACATGGCTCGTGGTCAGATCATACGCCACATCCCGCAATCCATATCCAG CCTCGATGGTCTGATGATACGTCTGCCCATCCACTTCGTGGGTTCCTTGA AAGTGCGCCCGCTGCCAGCCATGCGACGTCAAGCCCACCCACAAAAGACC AAAGGAGATAACCCACAGCGTCCGTGCGGTCCGCTGCAGATTCAGTTCTT GGGGTGTCAACTCGTGGGGCTTGGGCGGAAGGGGAGGGCCAGCCTGAGCC TTAGCAGCAACATAGCTGGGAAGCGCGCTTAAGGTGGCAGCACTGGAGCT CAAGGCACTCTTGGCCATGTGCGCAGCGCCAGCAGCCGCGGCCTTGGCCT GCATGGCTTGCATCACGCCGTGTCTGTGCGGGGAATCCATTATGTTGAGG TCGGTTTCTGAGTTTCAGACGCTAAAAAAGCGGCATATTCTGGTCT back to topprotein sequence of jgi.p|Nanoce1779_2|582941 >mRNA_3663-protein ID=mRNA_3663-protein|Name=jgi.p|Nanoce1779_2|582941|organism=Nannochloropsis oceanica|type=polypeptide|length=542bp MLGLSFVRRLYVQSTETGALGNFHKMLEATAGFEVELHRLRDSPSLPSHR GVGVAMTAHVLSSTFKADFGALVVLTGGASDLVPAFRMARAENDSRYRMR QRVQEVVVLGGTHISPAFFPYLYRPVDGSAFIFESLMAACVVPKSELGRG TGSLSISSSSYLSLRRKARSLSPPMARSGQSKRGLENSISSPPLPSSEAP AEGFPVYSPSFQQLDNRNPTAYSMGRLAGSPRHSATTSDVSLNLSLSNSN SSGSGSGSCGSSVSVGVAGVGGRPRRWCNFGHRCKYFEDVETNFVHFQRF AHVCQHDTQCPFVLNYAVHRSTEEGRAHFLMWKHSCPHGLDCQYFAQPDK HRRHIEFFTHKAKVLNAAAAAVAQQQQQQQQQQQQQQQAQQQQQAHQRQR LVLQDHHLAALSLSPPASPLHAMAPRTPLSLPASLNETESLLSRFAGDWD PEMVSQMLQQHNQQQSHYHHHQQQILIPRPPRLHTQHSSTLTHSSTSSDT QNYPLLVSGSSGVEDEVSSQSSSSAATSPSMSPNTGTSNFW* back to topmRNA from alignment at scaffold_6:898727..902622- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3663 ID=mRNA_3663|Name=jgi.p|Nanoce1779_2|582941|organism=Nannochloropsis oceanica|type=mRNA|length=3896bp|location=Sequence derived from alignment at scaffold_6:898727..902622- (Nannochloropsis oceanica) CAGAATAAAGGGGTTGTGGCGGCGGCTGCCAATATTACCACCAGTGCAGG
CAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAGCAACAACAACA
GCAGTTTTAGCAGCAGACGGGGGAAGCGAGGCTTCTTCCTTATTGATGGT
GGCTATTACGAGTGGCTGCAGTGGCACATTCTTCAAGGCCGCATCGCCAC
GCACGCGATCGACGTCCGTCTGTTAGTGCAGCGCCTGGAAAATATGCTGG
GTTTGTCCTTTGTCCGGCGGCTCTACGTCCAGAGCACCGAGACGGGCGCC
CTTGGGAATTTCCACAAAATGCTTGAGGCAACTGCGGGATTCGAGGTTGA
ACTACATCGTCTAAGAGACTCACCCTCTTTGCCATCACATCGTGGCGTAG
GCGTGGCGATGACAGCCCACGTGTTGAGCTCGACTTTTAAAGCTGATTTT
GGTGCACTGGTGGTGCTGACAGGAGGGGCTTCGGATCTTGTTCCAGCTTT
TCGGATGGCACGAGCGGAGAACGATAGTCGCTACCGTATGCGGCAACGGG
TGCAGGAAGTGGTGGTTTTGGGCGGAACCCATATCAGCCCCGCCTTTTTT
CCTTATCTTTATCGGCCTGTGGACGGGTCGGCATTCATTTTCGAGAGCCT
CATGGCCGCGTGCGTTGTGCCCAAGAGTGAGTTGGGGCGTGGGACGGGCA
GTCTTTCAATCTCTTCGTCGTCCTACCTCTCCCTGAGGCGCAAAGCCCGC
TCACTCTCGCCGCCTATGGCCCGCTCAGGACAGTCCAAGAGGGGCCTTGA
AAACAGTATTTCTTCTCCACCTCTTCCTTCTTCTGAAGCACCCGCCGAGG
GCTTTCCGGTTTACTCCCCCTCTTTTCAGCAACTAGATAATCGCAACCCT
ACGGCGTACAGTATGGGCAGACTTGCGGGTAGCCCTCGCCATTCTGCGAC
CACGAGTGACGTAAGTCTCAATCTGAGCCTGAGCAACAGCAACAGCAGCG
GTAGCGGTAGTGGGAGTTGTGGCAGCAGCGTTAGCGTTGGCGTTGCGGGT
GTTGGGGGTCGTCCTCGGCGATGGTGCAATTTTGGGCATCGCTGCAAATA
TTTTGAGGATGTAGAGACTAATTTCGTGCATTTTCAGCGCTTTGCACACG
TGTGCCAGCATGACACTCAGTGCCCTTTCGTTCTGAACTATGCCGTGCAC
CGGTCGACAGAGGAAGGGAGGGCGCATTTTCTCATGTGGAAGCACTCGTG
TCCGCATGGCTTGGATTGCCAGTACTTCGCGCAGCCTGACAAACACCGCC
GACACATCGAGTTTTTTACACATAAGGCTAAGGTTCTCAATGCGGCGGCC
GCAGCCGTGGCTCAACAGCAACAGCAGCAGCAGCAGCAACAACAACAACA
ACAACAGGCACAGCAGCAGCAGCAGGCGCACCAGCGTCAGCGACTGGTGC
TCCAGGACCACCATCTTGCCGCCTTGTCCCTTTCTCCACCGGCCTCCCCC
CTCCATGCCATGGCTCCTAGAACACCGCTATCCTTGCCTGCCAGTCTGAA
TGAGACGGAGTCGTTGCTCAGCCGATTCGCCGGGGATTGGGACCCGGAGA
TGGTTTCCCAAATGCTACAACAGCATAATCAGCAGCAGAGCCACTATCAC
CACCACCAACAGCAGATTCTGATTCCCCGACCGCCTAGGCTGCACACACA
ACACTCCTCCACCCTCACCCACTCCTCCACTTCTTCTGATACCCAGAACT
ACCCCCTGCTTGTTTCGGGTAGCTCGGGCGTGGAAGACGAGGTGAGTAGC
CAGAGTAGTTCTAGCGCGGCCACCAGCCCTTCGATGTCCCCAAATACTGG
CACATCGAACTTCTGGTAGTATGGGCTGTGTGTGGATATATTATTCGTTT
GGCTGATGATCTAGATAGTTAAGGAATGCTTTTGTGGTAATTCCAGCCAG
GAACAAGAACAAGGAATGGCGTGGGGGCCGGTTTATTGAATGGATTTTCA
AACGAATTGACAGGAAGATGAGCGAGTATTTGTGGTCATTTTGTAGATAC
GTCATAATAGGATTTTTAATATGATATGAACACTGTGGTTTTGTTTCGTC
CTTCGTGGTAGACTTCATTGAGACCTTGCGAGGAGAAGCATACATCGCGA
GGGAAAACTCAAAGCAATCTTCCTCACACCAAACAAGGCTGCTTTGAAAT
TCACACGCATTCCGAATCGCAAATACGGACATAGAAGAGAGGAAGGGAGG
AAAGTAGCATTCTGGCTACATTACAAAATTTAGCATGACTCAAATTATCA
TAGGATAAAGATTGAGTCAAGCACATTACCTCAAACACAACACAATTCTT
TCCCTTCAAAATGATGGAAAAGAAAATGCGTTATCCAAAGTACGGTTTTA
CAAAAGAAGATAAACCTAACACAAGCATGACATAGAGAGATGACGGCATG
GTCCGCAAATGAAGCGTGTCCTCCACCTTCTTTCGGTGTAATCCAATAAA
CATGAGAGAAACCTTTACTCCCAGGAGGAAAAAGTCTGAGAAAGCTTTGA
TGTTTTTTCAGTCCCATGAGATTCCACCAGCTTTCAAGCAAAGGTTGTCA
GCACGTAGCAAAATAGATGACATGAAGAACTGATATATAGCAAAAATTAA
GAGAAAAATACGATACCAAAATTTGCACAAGGTAGCTTTTCATTTGGTTT
CCTCATTTTTGGCATATAACACACGTAGTGCCAGACAAACACGGAAACAC
AAGAGCAACCGATCTATACGCCGACCAACCACGACGGTTGGGCCGAGTCA
CGGCTCCCACTATTCCCCTTGCCCACCACTGAGTACTGAGCCTGGTGGGT
TTGGGGATTCCAGGTCTCGGCGGGCGAGCGCGTGGAGTGAGGTGTCGCTA
CCTTTGCCCCCATCATAAGTGGATTGGTGCCAGGGGAGCTGCTTGCACGA
TAGCTGTTGTTGCGGACGTTCCCGGCTAGGTGGTGATTGTTGTAGCCGCC
CACAAGCTGGACCTCAACTTCTTCAGCGTCGTTATTGTCATTGTAGTGGG
CAAGGCGCCACAAAGTGAGAGCGAGGAAGAGAGCGAGCACCGCTGAGCTC
AACACGGCAATCCACGCGTAGTAAAGACCCACGACCCTCAAGCCGTCTCC
CGTTTGTTTCACGCAACCATCGACAGTGCAAAAGACGTGGAAAGCATCAG
GACGAATTAATTTCCAAGCAATCGCGGCAAGGGAACTAAAGATGCACTGA
GGAATGGCAGCATAAGCCGAATACCGCATGTACTTGGAGTTCCCGTCCGC
AGTACGCGCACATTTTGCCCTAAGGTGAGCAAGGAAGACACCCATCCCAG
TTACAGTAGCCACAGCCATACAGCATTGCACGAGAAGAAGGAGGGTGTAG
GGCAAGATGTCGCCTCCCTGGGCCATATTCCAGCTTGCGTACCCAACTGT
GACATGGCTCGTGGTCAGATCATACGCCACATCCCGCAATCCATATCCAG
CCTCGATGGTCTGATGATACGTCTGCCCATCCACTTCGTGGGTTCCTTGA
AAGTGCGCCCGCTGCCAGCCATGCGACGTCAAGCCCACCCACAAAAGACC
AAAGGAGATAACCCACAGCGTCCGTGCGGTCCGCTGCAGATTCAGTTCTT
GGGGTGTCAACTCGTGGGGCTTGGGCGGAAGGGGAGGGCCAGCCTGAGCC
TTAGCAGCAACATAGCTGGGAAGCGCGCTTAAGGTGGCAGCACTGGAGCT
CAAGGCACTCTTGGCCATGTGCGCAGCGCCAGCAGCCGCGGCCTTGGCCT
GCATGGCTTGCATCACGCCGTGTCTGTGCGGGGAATCCATTATGTTGAGG
TCGGTTTCTGAGTTTCAGACGCTAAAAAAGCGGCATATTCTGGTCT back to topCoding sequence (CDS) from alignment at scaffold_6:898727..902622- >mRNA_3663 ID=mRNA_3663|Name=jgi.p|Nanoce1779_2|582941|organism=Nannochloropsis oceanica|type=CDS|length=1626bp|location=Sequence derived from alignment at scaffold_6:898727..902622- (Nannochloropsis oceanica) ATGCTGGGTTTGTCCTTTGTCCGGCGGCTCTACGTCCAGAGCACCGAGAC GGGCGCCCTTGGGAATTTCCACAAAATGCTTGAGGCAACTGCGGGATTCG AGGTTGAACTACATCGTCTAAGAGACTCACCCTCTTTGCCATCACATCGT GGCGTAGGCGTGGCGATGACAGCCCACGTGTTGAGCTCGACTTTTAAAGC TGATTTTGGTGCACTGGTGGTGCTGACAGGAGGGGCTTCGGATCTTGTTC CAGCTTTTCGGATGGCACGAGCGGAGAACGATAGTCGCTACCGTATGCGG CAACGGGTGCAGGAAGTGGTGGTTTTGGGCGGAACCCATATCAGCCCCGC CTTTTTTCCTTATCTTTATCGGCCTGTGGACGGGTCGGCATTCATTTTCG AGAGCCTCATGGCCGCGTGCGTTGTGCCCAAGAGTGAGTTGGGGCGTGGG ACGGGCAGTCTTTCAATCTCTTCGTCGTCCTACCTCTCCCTGAGGCGCAA AGCCCGCTCACTCTCGCCGCCTATGGCCCGCTCAGGACAGTCCAAGAGGG GCCTTGAAAACAGTATTTCTTCTCCACCTCTTCCTTCTTCTGAAGCACCC GCCGAGGGCTTTCCGGTTTACTCCCCCTCTTTTCAGCAACTAGATAATCG CAACCCTACGGCGTACAGTATGGGCAGACTTGCGGGTAGCCCTCGCCATT CTGCGACCACGAGTGACGTAAGTCTCAATCTGAGCCTGAGCAACAGCAAC AGCAGCGGTAGCGGTAGTGGGAGTTGTGGCAGCAGCGTTAGCGTTGGCGT TGCGGGTGTTGGGGGTCGTCCTCGGCGATGGTGCAATTTTGGGCATCGCT GCAAATATTTTGAGGATGTAGAGACTAATTTCGTGCATTTTCAGCGCTTT GCACACGTGTGCCAGCATGACACTCAGTGCCCTTTCGTTCTGAACTATGC CGTGCACCGGTCGACAGAGGAAGGGAGGGCGCATTTTCTCATGTGGAAGC ACTCGTGTCCGCATGGCTTGGATTGCCAGTACTTCGCGCAGCCTGACAAA CACCGCCGACACATCGAGTTTTTTACACATAAGGCTAAGGTTCTCAATGC GGCGGCCGCAGCCGTGGCTCAACAGCAACAGCAGCAGCAGCAGCAACAAC AACAACAACAACAGGCACAGCAGCAGCAGCAGGCGCACCAGCGTCAGCGA CTGGTGCTCCAGGACCACCATCTTGCCGCCTTGTCCCTTTCTCCACCGGC CTCCCCCCTCCATGCCATGGCTCCTAGAACACCGCTATCCTTGCCTGCCA GTCTGAATGAGACGGAGTCGTTGCTCAGCCGATTCGCCGGGGATTGGGAC CCGGAGATGGTTTCCCAAATGCTACAACAGCATAATCAGCAGCAGAGCCA CTATCACCACCACCAACAGCAGATTCTGATTCCCCGACCGCCTAGGCTGC ACACACAACACTCCTCCACCCTCACCCACTCCTCCACTTCTTCTGATACC CAGAACTACCCCCTGCTTGTTTCGGGTAGCTCGGGCGTGGAAGACGAGGT GAGTAGCCAGAGTAGTTCTAGCGCGGCCACCAGCCCTTCGATGTCCCCAA ATACTGGCACATCGAACTTCTGGTAG back to top
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