jgi.p|Nanoce1779_2|582849, mRNA_3634 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|582849
Unique Name	mRNA_3634
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5091
Alignment location	scaffold_6:826715..832557 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	582935
Track	FilteredModels2
ProteinId	582849

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_6	supercontig	scaffold_6:826715..832557 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|582849	gene_3634	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|582849	mRNA_3634-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3634	CDS_3634	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_6:826715..832557+
coding sequence from alignment at scaffold_6:826715..832557+

mRNA sequence

>mRNA_3634 ID=mRNA_3634|Name=jgi.p|Nanoce1779_2|582849|organism=Nannochloropsis oceanica|type=mRNA|length=5091bp
ACAGCTAGCTGCACGTGCGCCCCCAAGCCACAAGCAAAGCAAAGAAGAAG
GACAAAGAGATCAGGACCGCTGTCCTTGGACCGCCCGCCGCCCACATCTA
GACACCGCCACTACCAAGCTGTCATGTCAAAGCGAGATTATGACTTCCTC
TTCAAGCTCGTCTTGATTGGGGACACGGGCGTGGGCAAGTCCTGCCTTCT
CCTGCGGTTTGCGGACGACGCCTTTACCGATTCGTACATCTCCACCATCG
GAGTCGACTTTCGATTCCGCACTGTGAAGATCGACAAGAAGACTTTCAAG
CTCCAGATCTGGGACACTGCTGGACAGGAGCGATTCCGCACAATCACTTC
TGCGTATTACCGAGGAGCAGACGGTATCATCATGGTCTATGACGTCACCA
ATGAGGAATCCTTTGAGCACATCCAGGACTGGCTGAATGAGGTGAATCGA
TACGCCTCTGAGGGGACCTGCAAGCTCTTGGTCGGCAACAAGAGCGACCG
AGAGGACAAGGTGGTCTCTACCGAAAGGGCGAAGAAATTCGCCGATGAAT
TAGGCATTCCTTTTCTCGAAACCTCGGCCAAGAACGCTTCCAACGTCGAA
GAAGCGTTTCTAACGATGGCGCAAGAGTTGATCCGCCTCCGTGAGGCCAA
GGGGGCCGCGGCGGCTGGCGCGGGGGGGGCGGTTGCAGGAGGGAAGGGGG
GGGAAACAGTGTCGGTGTCGAACAAGAATACAGAAGAGAAGAAGGTAGGG
AAAAATTGTTGCTAGGCTATTCGGGTTGAAAGAAGGAGGTGGTGTTTCTA
GTCATGAGGAATAGAGGGAGGGGAAAATGTAGTCCTTGAAATGGACGTAA
CAAATTAATTATAAAAAAGAGAATAAAGCAAGCAAGTGCGCGATAAAAGG
TCGAATGAACAAAGAGTGAAAGTCGCGCAAAGTAGAGATTTGTAGAGACA
TTTTTTCATGTACGTGTGTGTGAGTGGAGATAGCCAGCTGTGAGCAAACA
AGACCTTTTAATCAAAAGGGAAGTTCAGGGGATGTGGGTTCAGTACACTC
ACCATCGGGCAGAAGGAGGGGGAAAGATAGCCGCTACCTGCATGCAAGAT
AAGACAAAAGGAGATACAAAAAAGACACAATTTGATGGCAATAGTCTGAC
ATACTGACACTGAATCCGTTTGAGCGTCGTTTTTGTACCGTCGGTGGTAC
ACAACCCATGAAAAATTATGCCCACAGATTTCCATCTATCTCCCCATTTG
TAGTAGTAGCCTTCAAGTTACATGCATCAAGACAAGAAGAGCTTTTGGAC
AAAGCAATTTGCGATGGCTATCGACCTGGGTCATTTTTTTAAGGGAGCGT
ATATTCCGAGATGAGTGAGGACTCCATCGGATATGCCCGACGCATCCCGA
CCCAGTCCTATTCAAGCACTTTCACGATACCCAAACCCATCCACAGCACA
GGTTGGTCGCGATCGAAGCTGAGCTCTGTCAGGCCCACATTCGCCGCTTC
ATGGGCTTGTCATCAGACGTAGCATTATCCTCATCTAGCCATTGTTGCTT
AGAGAAGGGAAAGACATCGGAGAAGGAAAAAGAGTAGAAGTAGCAGCACC
GTTGGTAGCAGGCAACTTTTCGTCCTGCCACGCACCTCCATGGAAGACAA
TGCAGGGGCAAGCTTAGGCGCCAACAATAAAGAGTTGTGGGTGTCCCGCG
TGGTGTGCGCTGTTGGCGCCGTGGCAGGCCTTGCCATCATCCCCGTGGCC
CTTACTTCCCGTCGCCGTGTCTTTCAAAAGCGCACAGACCTTGCAAGCGA
TGACGTGATGTTGCTGTTTGAGAAATTACTGATGTTGAAAGGCGGATTGG
ACGGGATCCTATGTCTCATTTGGCTGACCGGTCTGCTCGTGTCGGGCGAT
TCGGTAGGCTGTAAAGTCCTTGGCTTTCTGTACCAGTTTGAAAAATATGT
ACGCTCGTCCTGTTGATTCGGTTCGCCCAGCATCCGTTTCAGTTCCTTTT
GAAAAAGGAGGACATGACCCACACGAATCAATACTTTATGAGAAGTGTCT
TCGCCGCTCTCGTGGTAGCCACCGTCGTATGCGTTCCAATAGCGGCCTTG
AGTGAATTTGGGAGAAGTGGGACGCTGTGTTGGTTGGCCTCGGTGGCCCT
GAAATTCTTTTCATTTTTATCCCTGGTCATTTTGATGTGGTTTATCTGCC
TGTTGGTCATTTTCCGCATGGCTCGCGTCACGCGCCATCGATATGCTGGG
CGCTCGCTCAAAGTCTACCACGGTAGTTTCTTTCGGCGCCTCACGGATGG
GATGGTCGTGCACTTGGTGATCATTGCTGCGGTGGTCGTTATCTACGGGT
ACGTCTTCCGCGTGGCCTTTCGTACGTACATCTGGAGGTTTGGGAGAGAA
TCGGTCGCGTTTTCATTCATGGAAATGATTACCATAGCTTTTCGCGGGCC
CGTGGACGCGATCGGCTACTCCCCCGAGGACTGGCTTGTCCGCTTGAACC
GCTTTGTGTGCAACGGATGTCGACGACGGAATGCATCCGGTGGTTTGCCT
CACTCGAAGTCGTCCATGGCTGTGGCTTCCGGCCCAAGCGTCGAGCCCGT
CCGTCTCAGCTTGATGGGAAAAGCGTACCCCTTCCTTTTTTCACCGACCC
CCCCGTTCCTCAGAAGGAAGACCGACACTTGTTTATTATTACTTACAAAA
TGGCTGAATGTGATAGCAAGGCTTTGGGGCCTAAGGAGTTTGCGGGATGG
ATTCCACGCGATAGGGATGTGTATGTACTGGTGGTGTAGGAGTGCATGAT
TTATCAGCAGCTAGGGGAGGACATTTTGGCTCACTTGGGGGGGCCTGAGA
AGTACGTGATGTGTCGCCGAGCGATAGGGTCGACAAATCGCGCGTTAGGG
TACCTTGGATTTATTGCTTTGCTGGTATTGGCGAGAAGGGAGGAGGTACG
GGCGAACCGTTTCTTGCTGCACGAGAGTAAGACGAGCGCGCTGGCGCGTG
GGAAGAATTTGGGGGTGACTGTCGCGCAAAACAAGGGAGGCGTGGGATTG
GCTTTCAGGTATTACGACACTACGTTTGCTTTGCTTGCGTGTCATTTATC
GTCGGATTTGAAGGGTCGTTCCAGGCTGAAGAGGAGGAATCAGGACGCGT
GGCGGTTGACGTACGAGACGAATTTGTGGAGGGAAGATTATTTGCTCGAT
GTCCACCACCAGCACCACGTGTGTTTGTTTTTGGGGATTTGAATTATCGA
CTAAGGAGAACGAATGCAGGGGAGTTCTTGGAAGATGTAGCAGGGATTTG
TAGGGTGGAAAGGGATGAGGTATGTGGAGGGGAGAAGGAATGGAGGAGGA
AGAGGTATGCAGCGTTGTTTGGGCCGAGGGAGGGAGTGGTGGCTGGGGAG
GTAAAGAAGGAGGTGGAAGTGAAGGAAGAGGAGGACAGTGAAAGTGTGGT
TCCACTTGACACCAAGCAGGTAGAGGTGGAGGGCGGTAAGGATGGGGAAG
GAGAGAATGGGAGCGGGGAAACCCAACGTGACGCGGAGGAGGATATGGGA
GACGACGACGAGGACGACGAGGAAGAGGAAGAGGACGAGAAGGACGACGA
TGAGGATGACGAAGGTGGTAGCTACAGCAGTCCCCGCTTCCACGGCGTGC
AAGGGCTGGTGCGACAAGTCAAAAGCTACTTGTCCGAGCCCTCCCACATC
GAAATGAACAGGTTGACAATGCAGCGATTGACATCTTCTTACGTCTGGAG
AATAAAAACGGCGGGGATGCCACCGAGGATGAGGAAGACGACCTAATGGG
GGTAGATAGGGGGAAGCATAGGGATCTGCAGCGGATAAATACCCTGAATC
GGCGCCATTCGCGGGGAGGGAGGGTTTCATACTCTCTGCAGCAGCAGCGA
AGTCGCTCCCGTCGCATAGCATTGCCCAAGTGTAGCAGTAGCAGCAACAA
GGACTTTGAGAAGGATTTTGAAACTGGCGGCGGATACCGCGGCCTACCCA
AATGTTCTCCTTCATGGCCTTCCTCTCAACAAGGCGTTCTGACCCCCACT
GTTCCGCAGCTATCAGCAGGAGCCCCTTTGGGCGGATCGTGGGGTCCTCC
TGTACCCTCCTCCGAGGGCGCAAACCGACTTTTACATCACAATCGCCCAT
GGTGTCACAGAAAGCGACAACTTGGGCAGAGCTTTTGCAGGATGATGAAT
TGAAGCAAGGGATGGATATAGGTGATTTGTTCTATGGATTCCAAGAAGGG
AAGATCCGCCTTCCTCCTTCTTATCGGCGCGCCAAAGGCCTAAATGGCGA
GTGTGGGGATTATACAGATGCTGGTGAATTGAAAAAGGCATTTAGCACTG
CTGTCAAGGAAAAATCACGGCCCCTGCACAGTCTAAATCGTGGCCTGACC
CATAAACTGTATCGTGGCTTGGATAATTTTGGCCATTCAAAGAAGCATAG
GTTGCAGCAAGAGCAGCAGGAGCAGCAGGAGCAGCAGGAGCAGGTGTATA
CCAGCAAAGGCATTTCGTTTGACATCCGTCTGGCGGAATCCTGTCGTGTG
GATAGCAGCCTTCGATCGCTGGAGGTGGAGGGTGAAGTTGTCGTCGGTGC
AGGCGGGGGAGTGGGAGGATTGGAAGGAGGTAGAGGAGATATGTCTTGGG
TATCTATGAGGGCTACAACAGGGATGACAATGACGACTCCTAACTATAGC
GGTAACAGCAGCACACGAATATCTGCCCCTATTCCATCATACACCGATCG
AATCTTGCTGCACGTGGTGGAGGACTTTCGAGACCGACCTTCTCTTGGTC
CATACGAGATATGCGATGCCCTTGTACACTCGGACCACAGGCCTGTATCT
ACTCTTGTAACTGCTCGAGTGAATGTGGGCGTAAGGGGGCTCAACGCATG
TCAGCAGGCAAGCGAAATCCTGCACGATCCGACGGTTGTTCAAGGGAGGG
ATATCGTGACGGCACATGATGCGTGTTTCTATTTATTGGAGTTGACGGAC
GTGAGGGTCGAATTGTTCGCGGGGGGTTTGACCTGATGTAAGTTAGAGGA
GGAGGAAGAGGCTGAGGAGGTGGAGGAGGAAGCGGTGGTGG

protein sequence of jgi.p|Nanoce1779_2|582849

>mRNA_3634-protein ID=mRNA_3634-protein|Name=jgi.p|Nanoce1779_2|582849|organism=Nannochloropsis oceanica|type=polypeptide|length=214bp
MSKRDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRT
VKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHI
QDWLNEVNRYASEGTCKLLVGNKSDREDKVVSTERAKKFADELGIPFLET
SAKNASNVEEAFLTMAQELIRLREAKGAAAAGAGGAVAGGKGGETVSVSN
KNTEEKKVGKNCC*

mRNA from alignment at scaffold_6:826715..832557+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3634 ID=mRNA_3634|Name=jgi.p|Nanoce1779_2|582849|organism=Nannochloropsis oceanica|type=mRNA|length=5843bp|location=Sequence derived from alignment at scaffold_6:826715..832557+ (Nannochloropsis oceanica)
ACAGCTAGCTGCACGTGCGCCCCCAAGCCACAAGCAAAGCAAAGAAGAAG
GACAAAGAGATCAGGACCGCTGTCCTTGGACCGCCCGCCGCCCACATCTA
GACACCGCCACTACCAAGCTGTCATGTCAAAGCGAGATTATGACTTCCTC
TTCAAGCTCGTCTTGATTGGGGACACGGGCGTGGGCAAGTCCTGCCTTCT
CCTGCGGTTTGCGGACGACGCCTTTACCGATTCGTACATCTCCACCATCG
GAGTCGACTTTGTGAGTACTTATTGTAGCAGGAAGCAACATGTGGCTTCA
TAGACTAGATTTATGAATATTTCTGTGCGTCGCTCGCATTGTCAGTAGTG
TCGCAGATACGGATAGGAAGTGGTGGGTCTGGGAAGGGGGCTGGGAACTG
GTCAGGCCCTTCATTCTCTTTTGCACGTGTCGCCACTGCTCTCCTTTTCA
TTTCTGACGCTACCCTCATATTTTTCTATACTACATACATGTGACCACTC
CAGCGATTCCGCACTGTGAAGATCGACAAGAAGACTTTCAAGCTCCAGAT
CGTAAGTAGGGGAGAGAGGACGAAAGTACGGAGCTGAGGGATGAAAGCGA
GATGAACTTGCATCACGACCGGCGGGCGAAGTTTGTTGTATATCATTAGG
ATTCCTCCCCTCTCACCTGAACCATGCTTTCCGCGATGATGCGGCCACTA
TTTGGCGCTCTCTCTTTTCTTTTACCTCATTTTGCTGGCATCCCCTCTCT
CTGCCTCCCTCCCTTCCTTACAGTGGGACACTGCTGGACAGGAGCGATTC
CGCACAATCACTTCTGCGTATTACCGAGGAGCAGACGGTATCATCATGGT
CTATGACGTCACCAATGAGGTGAGGGGCTACAGACGGTGGGAGAGAGATA
GGGAAGAAGTCAAGTAGAAGATGAGAGAAATTGGCGTGAATTTTATTGCA
TGCTTTATTTATTCCGAGTTTTGATATCCCTCCTACTCTCCCCTTTCCCT
TTCTCCTTCAGGAATCCTTTGAGCACATCCAGGACTGGCTGAATGAGGTG
AATCGATACGCCTCTGAGGGGACCTGCAAGCTCTTGGTCGGCAACAAGAG
CGACCGAGAGGACAAGGTGGTCTCTACCGAAAGGGCGAAGGTGCGTCTTT
CTATGTTTCCTCCTCCGAATGCTGCTTCTTCTTCGTATGCGTGTTGATGA
TTTCCCCCCTGAATAATTGAAGTGACCATTTGCTTCTCCTCTCACTGCCC
TCCAACCATTTATCCTTCCCTACCTTCACTTTCCAGAAATTCGCCGATGA
ATTAGGCATTCCTTTTCTCGAAACCTCGGCCAAGAACGCTTCCAACGTCG
AAGAAGCGTTTCTAACGATGGCGCAAGAGTTGATCCGCCTCCGTGAGGCC
AAGGGGGCCGCGGCGGCTGGCGCGGGGGGGGCGGTTGCAGGAGGGAAGGG
GGGGGAAACAGTGTCGGTGTCGAACAAGAATACAGAAGAGAAGAAGGTAG
GGAAAAATTGTTGCTAGGCTATTCGGGTTGAAAGAAGGAGGTGGTGTTTC
TAGTCATGAGGAATAGAGGGAGGGGAAAATGTAGTCCTTGAAATGGACGT
AACAAATTAATTATAAAAAAGAGAATAAAGCAAGCAAGTGCGCGATAAAA
GGTCGAATGAACAAAGAGTGAAAGTCGCGCAAAGTAGAGATTTGTAGAGA
CATTTTTTCATGTACGTGTGTGTGAGTGGAGATAGCCAGCTGTGAGCAAA
CAAGACCTTTTAATCAAAAGGGAAGTTCAGGGGATGTGGGTTCAGTACAC
TCACCATCGGGCAGAAGGAGGGGGAAAGATAGCCGCTACCTGCATGCAAG
ATAAGACAAAAGGAGATACAAAAAAGACACAATTTGATGGCAATAGTCTG
ACATACTGACACTGAATCCGTTTGAGCGTCGTTTTTGTACCGTCGGTGGT
ACACAACCCATGAAAAATTATGCCCACAGATTTCCATCTATCTCCCCATT
TGTAGTAGTAGCCTTCAAGTTACATGCATCAAGACAAGAAGAGCTTTTGG
ACAAAGCAATTTGCGATGGCTATCGACCTGGGTCATTTTTTTAAGGGAGC
GTATATTCCGAGATGAGTGAGGACTCCATCGGATATGCCCGACGCATCCC
GACCCAGTCCTATTCAAGCACTTTCACGATACCCAAACCCATCCACAGCA
CAGGTTGGTCGCGATCGAAGCTGAGCTCTGTCAGGCCCACATTCGCCGCT
TCATGGGCTTGTCATCAGACGTAGCATTATCCTCATCTAGCCATTGTTGC
TTAGAGAAGGGAAAGACATCGGAGAAGGAAAAAGAGTAGAAGTAGCAGCA
CCGTTGGTAGCAGGCAACTTTTCGTCCTGCCACGCACCTCCATGGAAGAC
AATGCAGGGGCAAGCTTAGGCGCCAACAATAAAGAGTTGTGGGTGTCCCG
CGTGGTGTGCGCTGTTGGCGCCGTGGCAGGCCTTGCCATCATCCCCGTGG
CCCTTACTTCCCGTCGCCGTGTCTTTCAAAAGCGCACAGACCTTGCAAGC
GATGACGTGATGTTGCTGTTTGAGAAATTACTGATGTTGAAAGGCGGATT
GGACGGGATCCTATGTCTCATTTGGCTGACCGGTCTGCTCGTGTCGGGCG
ATTCGGTAGGCTGTAAAGTCCTTGGCTTTCTGTACCAGTTTGAAAAATAT
GTACGCTCGTCCTGTTGATTCGGTTCGCCCAGCATCCGTTTCAGTTCCTT
TTGAAAAAGGAGGACATGACCCACACGAATCAATACTTTATGAGAAGTGT
CTTCGCCGCTCTCGTGGTAGCCACCGTCGTATGCGTTCCAATAGCGGCCT
TGAGTGAATTTGGGAGAAGTGGGACGCTGTGTTGGTTGGCCTCGGTGGCC
CTGAAATTCTTTTCATTTTTATCCCTGGTCATTTTGATGTGGTTTATCTG
CCTGTTGGTCATTTTCCGCATGGCTCGCGTCACGCGCCATCGATATGCTG
GGCGCTCGCTCAAAGTCTACCACGGTAGTTTCTTTCGGCGCCTCACGGAT
GGGATGGTCGTGCACTTGGTGATCATTGCTGCGGTGGTCGTTATCTACGG
GTACGTCTTCCGCGTGGCCTTTCGTACGTACATCTGGAGGTTTGGGAGAG
AATCGGTCGCGTTTTCATTCATGGAAATGATTACCATAGCTTTTCGCGGG
CCCGTGGACGCGATCGGCTACTCCCCCGAGGACTGGCTTGTCCGCTTGAA
CCGCTTTGTGTGCAACGGATGTCGACGACGGAATGCATCCGGTGGTTTGC
CTCACTCGAAGTCGTCCATGGCTGTGGCTTCCGGCCCAAGCGTCGAGCCC
GTCCGTCTCAGCTTGATGGGAAAAGCGTACCCCTTCCTTTTTTCACCGAC
CCCCCCGTTCCTCAGAAGGAAGACCGACACTTGTTTATTATTACTTACAA
AATGGCTGAATGTGATAGCAAGGCTTTGGGGCCTAAGGAGTTTGCGGGAT
GGATTCCACGCGATAGGGATGTGTATGTACTGGTGGTGTAGGAGTGCATG
ATTTATCAGCAGCTAGGGGAGGACATTTTGGCTCACTTGGGGGGGCCTGA
GAAGTACGTGATGTGTCGCCGAGCGATAGGGTCGACAAATCGCGCGTTAG
GGTACCTTGGATTTATTGCTTTGCTGGTATTGGCGAGAAGGGAGGAGGTA
CGGGCGAACCGTTTCTTGCTGCACGAGAGTAAGACGAGCGCGCTGGCGCG
TGGGAAGAATTTGGGGGTGACTGTCGCGCAAAACAAGGGAGGCGTGGGAT
TGGCTTTCAGGTATTACGACACTACGTTTGCTTTGCTTGCGTGTCATTTA
TCGTCGGATTTGAAGGGTCGTTCCAGGCTGAAGAGGAGGAATCAGGACGC
GTGGCGGTTGACGTACGAGACGAATTTGTGGAGGGAAGATTATTTGCTCG
ATGTCCACCACCAGCACCACGTGTGTTTGTTTTTGGGGATTTGAATTATC
GACTAAGGAGAACGAATGCAGGGGAGTTCTTGGAAGATGTAGCAGGGATT
TGTAGGGTGGAAAGGGATGAGGTATGTGGAGGGGAGAAGGAATGGAGGAG
GAAGAGGTATGCAGCGTTGTTTGGGCCGAGGGAGGGAGTGGTGGCTGGGG
AGGTAAAGAAGGAGGTGGAAGTGAAGGAAGAGGAGGACAGTGAAAGTGTG
GTTCCACTTGACACCAAGCAGGTAGAGGTGGAGGGCGGTAAGGATGGGGA
AGGAGAGAATGGGAGCGGGGAAACCCAACGTGACGCGGAGGAGGATATGG
GAGACGACGACGAGGACGACGAGGAAGAGGAAGAGGACGAGAAGGACGAC
GATGAGGATGACGAAGGTGGTAGCTACAGCAGTCCCCGCTTCCACGGCGT
GCAAGGGCTGGTGCGACAAGTCAAAAGCTACTTGTCCGAGCCCTCCCACA
TCGAAATGAACAGGTTGACAATGCAGCGATTGACATCTTCTTACGTCTGG
AGAATAAAAACGGCGGGGATGCCACCGAGGATGAGGAAGACGACCTAATG
GGGGTAGATAGGGGGAAGCATAGGGATCTGCAGCGGATAAATACCCTGAA
TCGGCGCCATTCGCGGGGAGGGAGGGTTTCATACTCTCTGCAGCAGCAGC
GAAGTCGCTCCCGTCGCATAGCATTGCCCAAGTGTAGCAGTAGCAGCAAC
AAGGACTTTGAGAAGGATTTTGAAACTGGCGGCGGATACCGCGGCCTACC
CAAATGTTCTCCTTCATGGCCTTCCTCTCAACAAGGCGTTCTGACCCCCA
CTGTTCCGCAGCTATCAGCAGGAGCCCCTTTGGGCGGATCGTGGGGTCCT
CCTGTACCCTCCTCCGAGGGCGCAAACCGACTTTTACATCACAATCGCCC
ATGGTGTCACAGAAAGCGACAACTTGGGCAGAGCTTTTGCAGGATGATGA
ATTGAAGCAAGGGATGGATATAGGTGATTTGTTCTATGGATTCCAAGAAG
GGAAGATCCGCCTTCCTCCTTCTTATCGGCGCGCCAAAGGCCTAAATGGC
GAGTGTGGGGATTATACAGATGCTGGTGAATTGAAAAAGGCATTTAGCAC
TGCTGTCAAGGAAAAATCACGGCCCCTGCACAGTCTAAATCGTGGCCTGA
CCCATAAACTGTATCGTGGCTTGGATAATTTTGGCCATTCAAAGAAGCAT
AGGTTGCAGCAAGAGCAGCAGGAGCAGCAGGAGCAGCAGGAGCAGGTGTA
TACCAGCAAAGGCATTTCGTTTGACATCCGTCTGGCGGAATCCTGTCGTG
TGGATAGCAGCCTTCGATCGCTGGAGGTGGAGGGTGAAGTTGTCGTCGGT
GCAGGCGGGGGAGTGGGAGGATTGGAAGGAGGTAGAGGAGATATGTCTTG
GGTATCTATGAGGGCTACAACAGGGATGACAATGACGACTCCTAACTATA
GCGGTAACAGCAGCACACGAATATCTGCCCCTATTCCATCATACACCGAT
CGAATCTTGCTGCACGTGGTGGAGGACTTTCGAGACCGACCTTCTCTTGG
TCCATACGAGATATGCGATGCCCTTGTACACTCGGACCACAGGCCTGTAT
CTACTCTTGTAACTGCTCGAGTGAATGTGGGCGTAAGGGGGCTCAACGCA
TGTCAGCAGGCAAGCGAAATCCTGCACGATCCGACGGTTGTTCAAGGGAG
GGATATCGTGACGGCACATGATGCGTGTTTCTATTTATTGGAGTTGACGG
ACGTGAGGGTCGAATTGTTCGCGGGGGGTTTGACCTGATGTAAGTTAGAG
GAGGAGGAAGAGGCTGAGGAGGTGGAGGAGGAAGCGGTGGTGG

Coding sequence (CDS) from alignment at scaffold_6:826715..832557+

>mRNA_3634 ID=mRNA_3634|Name=jgi.p|Nanoce1779_2|582849|organism=Nannochloropsis oceanica|type=CDS|length=3210bp|location=Sequence derived from alignment at scaffold_6:826715..832557+ (Nannochloropsis oceanica)
ATGTCAAAGCGAGATTATGACTTCCTCTTCAAGCTCGTCTTGATTGGGGA
CACGGGCGTGGGCAAGTCCTGCCTTCTCCTGCGGTTTGCGGACGACGCCT
TTACCGATTCGTACATCTCCACCATCGGAGTCGACTTTCGATTCCGCACT
GTGAAGATCGACAAGAAGACTTTCAAGCTCCAGATCTGGGACACTGCTGG
ACAGGAGCGATTCCGCACAATCACTTCTGCGTATTACCGAGGAGCAGACG
GTATCATCATGGTCTATGACGTCACCAATGAGGAATCCTTTGAGCACATC
CAGGACTGGCTGAATGAGGTGAATCGATACGCCTCTGAGGGGACCTGCAA
GCTCTTGGTCGGCAACAAGAGCGACCGAGAGGACAAGGTGGTCTCTACCG
AAAGGGCGAAGAAATTCGCCGATGAATTAGGCATTCCTTTTCTCGAAACC
TCGGCCAAGAACGCTTCCAACGTCGAAGAAGCGTTTCTAACGATGGCGCA
AGAGTTGATCCGCCTCCGTGAGGCCAAGGGGGCCGCGGCGGCTGGCGCGG
GGGGGGCGGTTGCAGGAGGGAAGGGGGGGGAAACAGTGTCGGTGTCGAAC
AAGAATACAGAAGAGAAGAAGGTAGGGAAAAATTGTTGCTAGATGTCAAA
GCGAGATTATGACTTCCTCTTCAAGCTCGTCTTGATTGGGGACACGGGCG
TGGGCAAGTCCTGCCTTCTCCTGCGGTTTGCGGACGACGCCTTTACCGAT
TCGTACATCTCCACCATCGGAGTCGACTTTCGATTCCGCACTGTGAAGAT
CGACAAGAAGACTTTCAAGCTCCAGATCTGGGACACTGCTGGACAGGAGC
GATTCCGCACAATCACTTCTGCGTATTACCGAGGAGCAGACGGTATCATC
ATGGTCTATGACGTCACCAATGAGGAATCCTTTGAGCACATCCAGGACTG
GCTGAATGAGGTGAATCGATACGCCTCTGAGGGGACCTGCAAGCTCTTGG
TCGGCAACAAGAGCGACCGAGAGGACAAGGTGGTCTCTACCGAAAGGGCG
AAGAAATTCGCCGATGAATTAGGCATTCCTTTTCTCGAAACCTCGGCCAA
GAACGCTTCCAACGTCGAAGAAGCGTTTCTAACGATGGCGCAAGAGTTGA
TCCGCCTCCGTGAGGCCAAGGGGGCCGCGGCGGCTGGCGCGGGGGGGGCG
GTTGCAGGAGGGAAGGGGGGGGAAACAGTGTCGGTGTCGAACAAGAATAC
AGAAGAGAAGAAGGTAGGGAAAAATTGTTGCTAGATGTCAAAGCGAGATT
ATGACTTCCTCTTCAAGCTCGTCTTGATTGGGGACACGGGCGTGGGCAAG
TCCTGCCTTCTCCTGCGGTTTGCGGACGACGCCTTTACCGATTCGTACAT
CTCCACCATCGGAGTCGACTTTCGATTCCGCACTGTGAAGATCGACAAGA
AGACTTTCAAGCTCCAGATCTGGGACACTGCTGGACAGGAGCGATTCCGC
ACAATCACTTCTGCGTATTACCGAGGAGCAGACGGTATCATCATGGTCTA
TGACGTCACCAATGAGGAATCCTTTGAGCACATCCAGGACTGGCTGAATG
AGGTGAATCGATACGCCTCTGAGGGGACCTGCAAGCTCTTGGTCGGCAAC
AAGAGCGACCGAGAGGACAAGGTGGTCTCTACCGAAAGGGCGAAGAAATT
CGCCGATGAATTAGGCATTCCTTTTCTCGAAACCTCGGCCAAGAACGCTT
CCAACGTCGAAGAAGCGTTTCTAACGATGGCGCAAGAGTTGATCCGCCTC
CGTGAGGCCAAGGGGGCCGCGGCGGCTGGCGCGGGGGGGGCGGTTGCAGG
AGGGAAGGGGGGGGAAACAGTGTCGGTGTCGAACAAGAATACAGAAGAGA
AGAAGGTAGGGAAAAATTGTTGCTAGATGTCAAAGCGAGATTATGACTTC
CTCTTCAAGCTCGTCTTGATTGGGGACACGGGCGTGGGCAAGTCCTGCCT
TCTCCTGCGGTTTGCGGACGACGCCTTTACCGATTCGTACATCTCCACCA
TCGGAGTCGACTTTCGATTCCGCACTGTGAAGATCGACAAGAAGACTTTC
AAGCTCCAGATCTGGGACACTGCTGGACAGGAGCGATTCCGCACAATCAC
TTCTGCGTATTACCGAGGAGCAGACGGTATCATCATGGTCTATGACGTCA
CCAATGAGGAATCCTTTGAGCACATCCAGGACTGGCTGAATGAGGTGAAT
CGATACGCCTCTGAGGGGACCTGCAAGCTCTTGGTCGGCAACAAGAGCGA
CCGAGAGGACAAGGTGGTCTCTACCGAAAGGGCGAAGAAATTCGCCGATG
AATTAGGCATTCCTTTTCTCGAAACCTCGGCCAAGAACGCTTCCAACGTC
GAAGAAGCGTTTCTAACGATGGCGCAAGAGTTGATCCGCCTCCGTGAGGC
CAAGGGGGCCGCGGCGGCTGGCGCGGGGGGGGCGGTTGCAGGAGGGAAGG
GGGGGGAAACAGTGTCGGTGTCGAACAAGAATACAGAAGAGAAGAAGGTA
GGGAAAAATTGTTGCTAGATGTCAAAGCGAGATTATGACTTCCTCTTCAA
GCTCGTCTTGATTGGGGACACGGGCGTGGGCAAGTCCTGCCTTCTCCTGC
GGTTTGCGGACGACGCCTTTACCGATTCGTACATCTCCACCATCGGAGTC
GACTTTCGATTCCGCACTGTGAAGATCGACAAGAAGACTTTCAAGCTCCA
GATCTGGGACACTGCTGGACAGGAGCGATTCCGCACAATCACTTCTGCGT
ATTACCGAGGAGCAGACGGTATCATCATGGTCTATGACGTCACCAATGAG
GAATCCTTTGAGCACATCCAGGACTGGCTGAATGAGGTGAATCGATACGC
CTCTGAGGGGACCTGCAAGCTCTTGGTCGGCAACAAGAGCGACCGAGAGG
ACAAGGTGGTCTCTACCGAAAGGGCGAAGAAATTCGCCGATGAATTAGGC
ATTCCTTTTCTCGAAACCTCGGCCAAGAACGCTTCCAACGTCGAAGAAGC
GTTTCTAACGATGGCGCAAGAGTTGATCCGCCTCCGTGAGGCCAAGGGGG
CCGCGGCGGCTGGCGCGGGGGGGGCGGTTGCAGGAGGGAAGGGGGGGGAA
ACAGTGTCGGTGTCGAACAAGAATACAGAAGAGAAGAAGGTAGGGAAAAA
TTGTTGCTAG

Synonyms

Publications