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Properties
| Property Name | Value |
|---|
| TranscriptId | 582775 |
| Track | FilteredModels2 |
| ProteinId | 582689 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_6 | supercontig | scaffold_6:710698..712061 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3586 ID=mRNA_3586|Name=jgi.p|Nanoce1779_2|582689|organism=Nannochloropsis oceanica|type=mRNA|length=930bp
CGCGGATAGCTGAAGGAAAGACCACTTCCTATTCAACCCCGCATCCTATG
GCAGTAGGACAGTTGCATCTCACCACTTCAATGACCTCAACGCCAATTTT
AGGCATCGGGGGCGCTATTATTCGGGCAAACAAATACGCCGGGCCTATCA
ACCTCCGTTGCGACGCAGTATCAGATGGACAACGAAAAGACCAATGGCGG
CAGCACAGCCGCGGCATCGCATGAAACAGGCTCGCCTTCCGAAGCATCTG
CTGCCACGGAGGGAGCGACTTCGCATATCCCCAGCAGGAGGGTGGCTGGG
GCGGAATCCTCCTATGTGAATTTTGGATTGGAGCTATGGAACAAGAGACG
GAAAGTATGGCTAAGAAAGGGCGAGAAATCAGAAGGGGTCAGTGCTAGCA
CCAGCCGTCCTGCGGCAATAACGCTTCTTCCCAAACGGTCGCGATCTGTG
GATGTGGACACGATCATTGAGAGCATTTTTTCGACCACGGGGGATGCACG
CTTACCGCAGCCGGTGCCTCTCTCGCAGATGATTGATTTGCTCGTCGACT
TTTGGGAGGCGGACGGGCTCTATGACTAGGTGGGGAGGGGGGGAAGGGAG
ACCGACAAAAGCGTGGCAGCCGGGGTGCCTGTTTTTACGGGTGATATGTT
TTCGCAAGGAGGACGGGAAGGGATGGGAACGCCAGAGAGAGCATCCGAAA
GGATACAGTTTGTAAAGGACGACAAAATGTAAATAATAAAACCGCCAAGC
AGCCAAACCAAAAAGCCAAACGTCAAGAAGCCACGTTGCTGCCCCTTTTT
TTCATCAACCTTACTCTCACATCCTACCCCCTCCCTTTATCGCTAGCTCC
CACTTGTTTTCGAATACCGTCTTCACTCCTCCCGTTTTCTACGTCCTTTT
TTTTACTCCCCCCAATACATGTGCAAGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|582689 >mRNA_3586-protein ID=mRNA_3586-protein|Name=jgi.p|Nanoce1779_2|582689|organism=Nannochloropsis oceanica|type=polypeptide|length=135bp
MDNEKTNGGSTAAASHETGSPSEASAATEGATSHIPSRRVAGAESSYVNF
GLELWNKRRKVWLRKGEKSEGVSASTSRPAAITLLPKRSRSVDVDTIIES
IFSTTGDARLPQPVPLSQMIDLLVDFWEADGLYD* back to topmRNA from alignment at scaffold_6:710698..712061+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3586 ID=mRNA_3586|Name=jgi.p|Nanoce1779_2|582689|organism=Nannochloropsis oceanica|type=mRNA|length=1364bp|location=Sequence derived from alignment at scaffold_6:710698..712061+ (Nannochloropsis oceanica)
CGCGGATAGCTGAAGGAAAGACCACTTCCTATTCAACCCCGCATCCTATG
GCAGTAGGACAGTTGCATCTCACCACTTCAATGACCTCAACGCCAATTTT
AGGCATCGGGGGCGCTATTATTCGGGCAAACAAATACGCCGGGCCTATCA
ACCTCCGTTGCGACGCAGTATCAGATGGACAACGAAAAGACCAATGGCGG
CAGCACAGCCGCGGCATCGCATGAAACAGGCTCGCCTTCCGAAGCATCTG
CTGCCACGGAGGGAGCGACTTCGCATATCCCCAGCAGGAGGGTGGCTGGG
GCGGAATCCTCCTATGTGAATTTTGGTAAGCCAATGGATATTTCTAATGA
GTGAAGCATCAAAGACGCAGGGAAACGGCATAAGGGGCGTACTTGTGTAA
ATAGGGAAAGTAGGCCGGTGTAGCAGAAACTATTGTTGTCTGGATTGGAG
CTTATGTGCGGCGTCTCCCAATCCCCTTCGATCCGCTTGCCCTCCTCCAG
CAGCACAGATCTCGACGCAAACTCAAATCTGCCTCTACAACTATACAGGA
TTGGAGCTATGGAACAAGAGACGGAAAGTATGGCTAAGAAAGGGCGAGAA
ATCAGAAGGGGTCAGTGCTAGCACCAGCCGTCCTGCGGCAATAACGCTTC
TTCCCAAACGGTGAGTGTTTGTGGTGTACTCCCGCCCTGTTCATTCTTCT
TTACCATATTCATATTACTTGTTGTCTGGTAGGCTAGCATAAATGATCGT
TTCTATTTTGTTTGTGATATCTCAGGTCGCGATCTGTGGATGTGGACACG
ATCATTGAGAGCATTTTTTCGACCACGGGGGATGCACGCTTACCGCAGCC
GGTGCCTCTCTCGCAGATGATTGATTTGCTCGTCGACTTTTGGGAGGTAC
GTTTGGGGATACGAGAGAGGAGCAGCAAAGACACGAGGATTCATTCATTT
GTTTACCGATCTGGATTTTTTAATCATCTATCACAACTTAAGGCGGACGG
GCTCTATGACTAGGTGGGGAGGGGGGGAAGGGAGACCGACAAAAGCGTGG
CAGCCGGGGTGCCTGTTTTTACGGGTGATATGTTTTCGCAAGGAGGACGG
GAAGGGATGGGAACGCCAGAGAGAGCATCCGAAAGGATACAGTTTGTAAA
GGACGACAAAATGTAAATAATAAAACCGCCAAGCAGCCAAACCAAAAAGC
CAAACGTCAAGAAGCCACGTTGCTGCCCCTTTTTTTCATCAACCTTACTC
TCACATCCTACCCCCTCCCTTTATCGCTAGCTCCCACTTGTTTTCGAATA
CCGTCTTCACTCCTCCCGTTTTCTACGTCCTTTTTTTTACTCCCCCCAAT
ACATGTGCAAGTAA back to topCoding sequence (CDS) from alignment at scaffold_6:710698..712061+ >mRNA_3586 ID=mRNA_3586|Name=jgi.p|Nanoce1779_2|582689|organism=Nannochloropsis oceanica|type=CDS|length=1620bp|location=Sequence derived from alignment at scaffold_6:710698..712061+ (Nannochloropsis oceanica)
ATGGACAACGAAAAGACCAATGGCGGCAGCACAGCCGCGGCATCGCATGA
AACAGGCTCGCCTTCCGAAGCATCTGCTGCCACGGAGGGAGCGACTTCGC
ATATCCCCAGCAGGAGGGTGGCTGGGGCGGAATCCTCCTATGTGAATTTT
GGATTGGAGCTATGGAACAAGAGACGGAAAGTATGGCTAAGAAAGGGCGA
GAAATCAGAAGGGGTCAGTGCTAGCACCAGCCGTCCTGCGGCAATAACGC
TTCTTCCCAAACGGTCGCGATCTGTGGATGTGGACACGATCATTGAGAGC
ATTTTTTCGACCACGGGGGATGCACGCTTACCGCAGCCGGTGCCTCTCTC
GCAGATGATTGATTTGCTCGTCGACTTTTGGGAGGCGGACGGGCTCTATG
ACTAGATGGACAACGAAAAGACCAATGGCGGCAGCACAGCCGCGGCATCG
CATGAAACAGGCTCGCCTTCCGAAGCATCTGCTGCCACGGAGGGAGCGAC
TTCGCATATCCCCAGCAGGAGGGTGGCTGGGGCGGAATCCTCCTATGTGA
ATTTTGGATTGGAGCTATGGAACAAGAGACGGAAAGTATGGCTAAGAAAG
GGCGAGAAATCAGAAGGGGTCAGTGCTAGCACCAGCCGTCCTGCGGCAAT
AACGCTTCTTCCCAAACGGTCGCGATCTGTGGATGTGGACACGATCATTG
AGAGCATTTTTTCGACCACGGGGGATGCACGCTTACCGCAGCCGGTGCCT
CTCTCGCAGATGATTGATTTGCTCGTCGACTTTTGGGAGGCGGACGGGCT
CTATGACTAGATGGACAACGAAAAGACCAATGGCGGCAGCACAGCCGCGG
CATCGCATGAAACAGGCTCGCCTTCCGAAGCATCTGCTGCCACGGAGGGA
GCGACTTCGCATATCCCCAGCAGGAGGGTGGCTGGGGCGGAATCCTCCTA
TGTGAATTTTGGATTGGAGCTATGGAACAAGAGACGGAAAGTATGGCTAA
GAAAGGGCGAGAAATCAGAAGGGGTCAGTGCTAGCACCAGCCGTCCTGCG
GCAATAACGCTTCTTCCCAAACGGTCGCGATCTGTGGATGTGGACACGAT
CATTGAGAGCATTTTTTCGACCACGGGGGATGCACGCTTACCGCAGCCGG
TGCCTCTCTCGCAGATGATTGATTTGCTCGTCGACTTTTGGGAGGCGGAC
GGGCTCTATGACTAGATGGACAACGAAAAGACCAATGGCGGCAGCACAGC
CGCGGCATCGCATGAAACAGGCTCGCCTTCCGAAGCATCTGCTGCCACGG
AGGGAGCGACTTCGCATATCCCCAGCAGGAGGGTGGCTGGGGCGGAATCC
TCCTATGTGAATTTTGGATTGGAGCTATGGAACAAGAGACGGAAAGTATG
GCTAAGAAAGGGCGAGAAATCAGAAGGGGTCAGTGCTAGCACCAGCCGTC
CTGCGGCAATAACGCTTCTTCCCAAACGGTCGCGATCTGTGGATGTGGAC
ACGATCATTGAGAGCATTTTTTCGACCACGGGGGATGCACGCTTACCGCA
GCCGGTGCCTCTCTCGCAGATGATTGATTTGCTCGTCGACTTTTGGGAGG
CGGACGGGCTCTATGACTAG back to top
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